RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 C5P01031 1676 aa12.89□□□□□ -0.35
HMG20B-210ENST00000483417 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
HMG20B-210ENST00000483417 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
HMG20B-210ENST00000483417 HSP90AB1P08238 724 aaKnown RBP12.89□□□□□ -0.35
HMG20B-210ENST00000483417 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
HMG20B-210ENST00000483417 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
HMG20B-210ENST00000483417 HMOX1P09601 288 aa12.88□□□□□ -0.35
HMG20B-210ENST00000483417 ZNF530Q6P9A1 599 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-210ENST00000483417 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
HMG20B-210ENST00000483417 FLAD1Q8NFF5 587 aa12.88□□□□□ -0.35
HMG20B-210ENST00000483417 SMIM5Q71RC9 77 aa12.87□□□□□ -0.35
HMG20B-210ENST00000483417 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
HMG20B-210ENST00000483417 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
HMG20B-210ENST00000483417 POLD1P28340 1107 aa12.86□□□□□ -0.35
HMG20B-210ENST00000483417 ATP6V1AP38606 617 aa12.86□□□□□ -0.35
HMG20B-210ENST00000483417 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
HMG20B-210ENST00000483417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.85□□□□□ -0.35
HMG20B-210ENST00000483417 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
HMG20B-210ENST00000483417 MSH5O43196 834 aa12.85□□□□□ -0.35
HMG20B-210ENST00000483417 CABP4P57796 275 aa12.85□□□□□ -0.35
HMG20B-210ENST00000483417 NFATC2IPQ8NCF5 419 aa12.85□□□□□ -0.35
HMG20B-210ENST00000483417 SSFA2P28290 1259 aa12.84□□□□□ -0.35
HMG20B-210ENST00000483417 AKAP4Q5JQC9 854 aa12.84□□□□□ -0.35
HMG20B-210ENST00000483417 C1orf141Q5JVX7 400 aa12.84□□□□□ -0.35
HMG20B-210ENST00000483417 AK7Q96M32 723 aa12.84□□□□□ -0.35
HMG20B-210ENST00000483417 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
HMG20B-210ENST00000483417 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
HMG20B-210ENST00000483417 ZNF831Q5JPB2 1677 aa12.83□□□□□ -0.35
HMG20B-210ENST00000483417 UBR3Q6ZT12 1888 aa12.83□□□□□ -0.36
HMG20B-210ENST00000483417 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
HMG20B-210ENST00000483417 YY1P25490 414 aa12.83□□□□□ -0.36
HMG20B-210ENST00000483417 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
HMG20B-210ENST00000483417 MTHFSDQ2M296 383 aaKnown RBP12.83□□□□□ -0.36
HMG20B-210ENST00000483417 RC3H1Q5TC82 1133 aaKnown RBP12.83□□□□□ -0.36
HMG20B-210ENST00000483417 MSL1Q68DK7 614 aa12.83□□□□□ -0.36
HMG20B-210ENST00000483417 PHACTR3Q96KR7 559 aa12.83□□□□□ -0.36
HMG20B-210ENST00000483417 ADAMTS8Q9UP79 889 aa12.83□□□□□ -0.36
HMG20B-210ENST00000483417 NLGN2Q8NFZ4 835 aa12.82□□□□□ -0.36
HMG20B-210ENST00000483417 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
HMG20B-210ENST00000483417 SENP3-EIF4A1A0A087X0R7 540 aa12.81□□□□□ -0.36
HMG20B-210ENST00000483417 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
HMG20B-210ENST00000483417 SCN11AQ9UI33 1791 aa12.8□□□□□ -0.36
HMG20B-210ENST00000483417 GNPATO15228 680 aa12.8□□□□□ -0.36
HMG20B-210ENST00000483417 RNMTO43148 476 aaKnown RBP12.8□□□□□ -0.36
HMG20B-210ENST00000483417 PHF14O94880 888 aa12.8□□□□□ -0.36
HMG20B-210ENST00000483417 RSPH6AQ9H0K4 717 aa12.8□□□□□ -0.36
HMG20B-210ENST00000483417 SLC52A2Q9HAB3 445 aa12.8□□□□□ -0.36
HMG20B-210ENST00000483417 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
HMG20B-210ENST00000483417 NUDCQ9Y266 331 aa12.8□□□□□ -0.36
HMG20B-210ENST00000483417 CD2APQ9Y5K6 639 aa12.8□□□□□ -0.36
HMG20B-210ENST00000483417 CNTNAP4Q9C0A0 1308 aa12.8□□□□□ -0.36
HMG20B-210ENST00000483417 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
HMG20B-210ENST00000483417 RPS6KA4O75676 772 aa12.79□□□□□ -0.36
HMG20B-210ENST00000483417 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
HMG20B-210ENST00000483417 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
HMG20B-210ENST00000483417 ADAMTS7Q9UKP4 1686 aa12.79□□□□□ -0.36
HMG20B-210ENST00000483417 UTRNP46939 3433 aa12.78□□□□□ -0.36
HMG20B-210ENST00000483417 FCHSD2O94868 740 aa12.78□□□□□ -0.36
HMG20B-210ENST00000483417 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
HMG20B-210ENST00000483417 TRAPPC3LQ5T215 181 aa12.78□□□□□ -0.36
HMG20B-210ENST00000483417 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
HMG20B-210ENST00000483417 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
HMG20B-210ENST00000483417 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
HMG20B-210ENST00000483417 RTCBQ9Y3I0 505 aaKnown RBP12.78□□□□□ -0.36
HMG20B-210ENST00000483417 COL5A3P25940 1745 aaPredicted RBP12.78□□□□□ -0.36
HMG20B-210ENST00000483417 ADRA2BP18089 450 aa12.77□□□□□ -0.37
HMG20B-210ENST00000483417 GPR162Q16538 588 aa12.77□□□□□ -0.37
HMG20B-210ENST00000483417 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
HMG20B-210ENST00000483417 MRC1P22897 1456 aa12.77□□□□□ -0.37
HMG20B-210ENST00000483417 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
HMG20B-210ENST00000483417 YBX3P16989 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
HMG20B-210ENST00000483417 SLC39A6Q13433 755 aa12.76□□□□□ -0.37
HMG20B-210ENST00000483417 GYS1P13807 737 aa12.75□□□□□ -0.37
HMG20B-210ENST00000483417 CRKLP46109 303 aaKnown RBP12.75□□□□□ -0.37
HMG20B-210ENST00000483417 DNAJC10Q8IXB1 793 aa12.75□□□□□ -0.37
HMG20B-210ENST00000483417 FAM9BQ8IZU0 186 aa12.75□□□□□ -0.37
HMG20B-210ENST00000483417 NLGN1Q8N2Q7 840 aa12.75□□□□□ -0.37
HMG20B-210ENST00000483417 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
HMG20B-210ENST00000483417 TJP1Q07157 1748 aa12.74□□□□□ -0.37
HMG20B-210ENST00000483417 GNAT3A8MTJ3 354 aa12.74□□□□□ -0.37
HMG20B-210ENST00000483417 CCER2I3L3R5 266 aa12.74□□□□□ -0.37
HMG20B-210ENST00000483417 MMP10P09238 476 aa12.74□□□□□ -0.37
HMG20B-210ENST00000483417 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
HMG20B-210ENST00000483417 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMG20B-210ENST00000483417 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
HMG20B-210ENST00000483417 KCPQ6ZWJ8 1503 aa12.73□□□□□ -0.37
HMG20B-210ENST00000483417 RFC4P35249 363 aa12.73□□□□□ -0.37
HMG20B-210ENST00000483417 VSIG10Q8N0Z9 540 aa12.73□□□□□ -0.37
HMG20B-210ENST00000483417 CEMIPQ8WUJ3 1361 aa12.72□□□□□ -0.37
HMG20B-210ENST00000483417 GRIN3BO60391 1043 aa12.72□□□□□ -0.37
HMG20B-210ENST00000483417 ZNF784Q8NCA9 323 aaPredicted RBP12.72□□□□□ -0.37
HMG20B-210ENST00000483417 RRP7AQ9Y3A4 280 aaKnown RBP12.72□□□□□ -0.37
HMG20B-210ENST00000483417 VIRMAQ69YN4 1812 aaKnown RBP12.72□□□□□ -0.37
HMG20B-210ENST00000483417 USP42Q9H9J4 1324 aaKnown RBP12.71□□□□□ -0.37
HMG20B-210ENST00000483417 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
HMG20B-210ENST00000483417 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
HMG20B-210ENST00000483417 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.37
HMG20B-210ENST00000483417 SRP68Q9UHB9 627 aaKnown RBP12.71□□□□□ -0.37
HMG20B-210ENST00000483417 CHD4Q14839 1912 aa12.7□□□□□ -0.38
HMG20B-210ENST00000483417 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms