RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 PCGF6Q9BYE7 350 aa22.22■■□□□ 1.15
CHRD-213ENST00000482014 CCDC87Q9NVE4 849 aa22.22■■□□□ 1.15
CHRD-213ENST00000482014 KIF13BQ9NQT8 1826 aa22.22■■□□□ 1.15
CHRD-213ENST00000482014 LINC00116Q8NCU8 138 aa22.21■■□□□ 1.15
CHRD-213ENST00000482014 RRAGCQ9HB90 399 aa22.21■■□□□ 1.15
CHRD-213ENST00000482014 DPEP1P16444 411 aa22.2■■□□□ 1.14
CHRD-213ENST00000482014 USHBP1Q8N6Y0 703 aa22.2■■□□□ 1.14
CHRD-213ENST00000482014 TMF1P82094 1093 aa22.19■■□□□ 1.14
CHRD-213ENST00000482014 PIGBQ92521 554 aa22.19■■□□□ 1.14
CHRD-213ENST00000482014 KCPQ6ZWJ8 1503 aa22.19■■□□□ 1.14
CHRD-213ENST00000482014 RGPD2P0DJD1 1756 aa22.18■■□□□ 1.14
CHRD-213ENST00000482014 CYP27B1O15528 508 aa22.18■■□□□ 1.14
CHRD-213ENST00000482014 KIAA1551Q9HCM1 1747 aa22.17■■□□□ 1.14
CHRD-213ENST00000482014 RNF181Q9P0P0 153 aa22.17■■□□□ 1.14
CHRD-213ENST00000482014 N4BP2Q86UW6 1770 aaPredicted RBP22.17■■□□□ 1.14
CHRD-213ENST00000482014 PIM2Q9P1W9 311 aa22.16■■□□□ 1.14
CHRD-213ENST00000482014 FBLN1P23142 703 aa22.15■■□□□ 1.14
CHRD-213ENST00000482014 TRAPPC3LQ5T215 181 aa22.15■■□□□ 1.14
CHRD-213ENST00000482014 ATP6V1AP38606 617 aa22.14■■□□□ 1.13
CHRD-213ENST00000482014 DCAF5Q96JK2 942 aa22.14■■□□□ 1.13
CHRD-213ENST00000482014 RTCBQ9Y3I0 505 aaKnown RBP22.14■■□□□ 1.13
CHRD-213ENST00000482014 PARP3Q9Y6F1 533 aa22.14■■□□□ 1.13
CHRD-213ENST00000482014 ZC3H4Q9UPT8 1303 aaKnown RBP22.13■■□□□ 1.13
CHRD-213ENST00000482014 NKX1-1Q15270 411 aaPredicted RBP22.13■■□□□ 1.13
CHRD-213ENST00000482014 DALRD3Q5D0E6 543 aaKnown RBP22.13■■□□□ 1.13
CHRD-213ENST00000482014 TNRC6CQ9HCJ0 1690 aaKnown RBP22.13■■□□□ 1.13
CHRD-213ENST00000482014 ADRA2BP18089 450 aa22.12■■□□□ 1.13
CHRD-213ENST00000482014 KCNA3P22001 575 aa22.12■■□□□ 1.13
CHRD-213ENST00000482014 ITPK1Q13572 414 aa22.12■■□□□ 1.13
CHRD-213ENST00000482014 TMOD3Q9NYL9 352 aa22.12■■□□□ 1.13
CHRD-213ENST00000482014 MAP2P11137 1827 aaKnown RBP22.11■■□□□ 1.13
CHRD-213ENST00000482014 ITGB4P16144 1822 aa22.11■■□□□ 1.13
CHRD-213ENST00000482014 RRS1Q15050 365 aaKnown RBP22.11■■□□□ 1.13
CHRD-213ENST00000482014 PKD1L3Q7Z443 1732 aa22.11■■□□□ 1.13
CHRD-213ENST00000482014 ARFGEF1Q9Y6D6 1849 aa22.1■■□□□ 1.13
CHRD-213ENST00000482014 INSRP06213 1382 aa22.1■■□□□ 1.13
CHRD-213ENST00000482014 VEGFAP15692 232 aaPredicted RBP22.09■■□□□ 1.13
CHRD-213ENST00000482014 SPG7Q9UQ90 795 aa22.09■■□□□ 1.13
CHRD-213ENST00000482014 BRCA1P38398 1863 aaKnown RBP22.09■■□□□ 1.13
CHRD-213ENST00000482014 PCDH10Q9P2E7 1040 aa22.08■■□□□ 1.13
CHRD-213ENST00000482014 ASAP1Q9ULH1 1129 aa22.08■■□□□ 1.13
CHRD-213ENST00000482014 C4AP0C0L4 1744 aa22.07■■□□□ 1.12
CHRD-213ENST00000482014 GYS1P13807 737 aa22.07■■□□□ 1.12
CHRD-213ENST00000482014 RFC4P35249 363 aa22.07■■□□□ 1.12
CHRD-213ENST00000482014 ARHGEF1Q92888 912 aaKnown RBP22.07■■□□□ 1.12
CHRD-213ENST00000482014 HSP90AB2PQ58FF8 381 aa22.06■■□□□ 1.12
CHRD-213ENST00000482014 RC3H1Q5TC82 1133 aaKnown RBP22.06■■□□□ 1.12
CHRD-213ENST00000482014 KIF24Q5T7B8 1368 aa22.06■■□□□ 1.12
CHRD-213ENST00000482014 FLT4P35916 1363 aa22.05■■□□□ 1.12
CHRD-213ENST00000482014 CDCA8Q53HL2 280 aa22.05■■□□□ 1.12
CHRD-213ENST00000482014 GLTPD2A6NH11 291 aa22.03■■□□□ 1.12
CHRD-213ENST00000482014 CCER1Q8TC90 406 aaPredicted RBP22.03■■□□□ 1.12
CHRD-213ENST00000482014 PRDM10Q9NQV6 1147 aa22.03■■□□□ 1.12
CHRD-213ENST00000482014 ATG3Q9NT62 314 aa22.03■■□□□ 1.12
CHRD-213ENST00000482014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.03■■□□□ 1.12
CHRD-213ENST00000482014 RPS6KA4O75676 772 aa22.01■■□□□ 1.11
CHRD-213ENST00000482014 CNTNAP4Q9C0A0 1308 aa22.01■■□□□ 1.11
CHRD-213ENST00000482014 FYB1O15117 783 aa21.99■■□□□ 1.11
CHRD-213ENST00000482014 LMNB1P20700 586 aa21.99■■□□□ 1.11
CHRD-213ENST00000482014 IFNL2Q8IZJ0 200 aa21.99■■□□□ 1.11
CHRD-213ENST00000482014 GGNBP2Q9H3C7 697 aa21.99■■□□□ 1.11
CHRD-213ENST00000482014 CREBZFQ9NS37 354 aa21.99■■□□□ 1.11
CHRD-213ENST00000482014 KDRP35968 1356 aa21.99■■□□□ 1.11
CHRD-213ENST00000482014 KDM6AO15550 1401 aaPredicted RBP21.98■■□□□ 1.11
CHRD-213ENST00000482014 SBF1O95248 1867 aa21.97■■□□□ 1.11
CHRD-213ENST00000482014 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
CHRD-213ENST00000482014 RBM42Q9BTD8 480 aaKnown RBP21.96■■□□□ 1.11
CHRD-213ENST00000482014 FOXN1O15353 648 aa21.95■■□□□ 1.1
CHRD-213ENST00000482014 PHKG2P15735 406 aa21.95■■□□□ 1.1
CHRD-213ENST00000482014 CHRNA5P30532 468 aa21.95■■□□□ 1.1
CHRD-213ENST00000482014 CARD14Q9BXL6 1004 aa21.95■■□□□ 1.1
CHRD-213ENST00000482014 CTCFP49711 727 aaPredicted RBP21.94■■□□□ 1.1
CHRD-213ENST00000482014 RASSF7Q02833 373 aa21.94■■□□□ 1.1
CHRD-213ENST00000482014 AIDAQ96BJ3 306 aa21.94■■□□□ 1.1
CHRD-213ENST00000482014 MKRN1Q9UHC7 482 aaKnown RBP21.94■■□□□ 1.1
CHRD-213ENST00000482014 ZNF831Q5JPB2 1677 aa21.93■■□□□ 1.1
CHRD-213ENST00000482014 DPY19L2Q6NUT2 758 aa21.93■■□□□ 1.1
CHRD-213ENST00000482014 SLC4A9Q96Q91 983 aa21.93■■□□□ 1.1
CHRD-213ENST00000482014 ERVV-2B6SEH9 535 aa21.91■■□□□ 1.1
CHRD-213ENST00000482014 EIF4G2P78344 907 aaKnown RBP eCLIP21.91■■□□□ 1.1
CHRD-213ENST00000482014 DDR1Q08345 913 aa21.91■■□□□ 1.1
CHRD-213ENST00000482014 KIF20BQ96Q89 1820 aa21.9■■□□□ 1.1
CHRD-213ENST00000482014 USP42Q9H9J4 1324 aaKnown RBP21.9■■□□□ 1.1
CHRD-213ENST00000482014 HSPA5P11021 654 aaKnown RBP21.9■■□□□ 1.1
CHRD-213ENST00000482014 FKBP8Q14318 412 aa21.9■■□□□ 1.1
CHRD-213ENST00000482014 FAM161AQ3B820 660 aa21.89■■□□□ 1.09
CHRD-213ENST00000482014 CNTNAP1P78357 1384 aa21.88■■□□□ 1.09
CHRD-213ENST00000482014 POTECB2RU33 542 aa21.88■■□□□ 1.09
CHRD-213ENST00000482014 POLRMTO00411 1230 aaKnown RBP21.88■■□□□ 1.09
CHRD-213ENST00000482014 CHADLQ6NUI6 762 aa21.88■■□□□ 1.09
CHRD-213ENST00000482014 SRP68Q9UHB9 627 aaKnown RBP21.88■■□□□ 1.09
CHRD-213ENST00000482014 HSP90AB1P08238 724 aaKnown RBP21.87■■□□□ 1.09
CHRD-213ENST00000482014 TM4SF1P30408 202 aa21.86■■□□□ 1.09
CHRD-213ENST00000482014 EYA1Q99502 592 aa21.86■■□□□ 1.09
CHRD-213ENST00000482014 EMILIN1Q9Y6C2 1016 aa21.86■■□□□ 1.09
CHRD-213ENST00000482014 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
CHRD-213ENST00000482014 CRKLP46109 303 aaKnown RBP21.85■■□□□ 1.09
CHRD-213ENST00000482014 TTLL6Q8N841 843 aa21.85■■□□□ 1.09
CHRD-213ENST00000482014 ABHD8Q96I13 439 aa21.84■■□□□ 1.09
CHRD-213ENST00000482014 WASHC2AQ641Q2 1341 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms