RNA–Protein interactions for RNA: ENST00000481928.1

PTMA-212, Transcript of prothymosin alpha, humanhuman

TSL 3

Gene PTMA, Length 1,635 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-212ENST00000481928 DUSP27Q5VZP5 1158 aa21.78■■□□□ 1.08
PTMA-212ENST00000481928 NFATC2IPQ8NCF5 419 aa21.78■■□□□ 1.08
PTMA-212ENST00000481928 LAS1LQ9Y4W2 734 aaKnown RBP21.78■■□□□ 1.08
PTMA-212ENST00000481928 FANCIQ9NVI1 1328 aa21.77■■□□□ 1.08
PTMA-212ENST00000481928 TMOD3Q9NYL9 352 aa21.77■■□□□ 1.08
PTMA-212ENST00000481928 TSPYL4Q9UJ04 414 aa21.77■■□□□ 1.08
PTMA-212ENST00000481928 BTBD11A6QL63 1104 aa21.77■■□□□ 1.07
PTMA-212ENST00000481928 CENPBP07199 599 aaPredicted RBP21.77■■□□□ 1.07
PTMA-212ENST00000481928 MBIPQ9NS73 344 aa21.77■■□□□ 1.07
PTMA-212ENST00000481928 FAM196AQ6ZSG2 479 aa21.75■■□□□ 1.07
PTMA-212ENST00000481928 TOGARAM1Q9Y4F4 1720 aa21.74■■□□□ 1.07
PTMA-212ENST00000481928 TSR2Q969E8 191 aaKnown RBP21.73■■□□□ 1.07
PTMA-212ENST00000481928 SIPA1L3O60292 1781 aaPredicted RBP21.73■■□□□ 1.07
PTMA-212ENST00000481928 PRIM1P49642 420 aaKnown RBP21.73■■□□□ 1.07
PTMA-212ENST00000481928 VIRMAQ69YN4 1812 aaKnown RBP21.72■■□□□ 1.07
PTMA-212ENST00000481928 CT47B1P0C2W7 299 aaPredicted RBP21.72■■□□□ 1.07
PTMA-212ENST00000481928 ZNF790Q6PG37 636 aa21.72■■□□□ 1.07
PTMA-212ENST00000481928 PIGBQ92521 554 aa21.72■■□□□ 1.07
PTMA-212ENST00000481928 DOT1LQ8TEK3 1739 aa21.71■■□□□ 1.07
PTMA-212ENST00000481928 TTC5Q8N0Z6 440 aa21.71■■□□□ 1.07
PTMA-212ENST00000481928 SYTL4Q96C24 671 aaPredicted RBP21.71■■□□□ 1.07
PTMA-212ENST00000481928 MIS18AQ9NYP9 233 aa21.71■■□□□ 1.07
PTMA-212ENST00000481928 SOS1Q07889 1333 aaPredicted RBP21.71■■□□□ 1.07
PTMA-212ENST00000481928 ACSBG1Q96GR2 724 aa21.69■■□□□ 1.06
PTMA-212ENST00000481928 BRWD3Q6RI45 1802 aa21.69■■□□□ 1.06
PTMA-212ENST00000481928 KDM3BQ7LBC6 1761 aa21.68■■□□□ 1.06
PTMA-212ENST00000481928 EIF4A1P60842 406 aaKnown RBP21.67■■□□□ 1.06
PTMA-212ENST00000481928 EXOSC9Q06265 439 aaKnown RBP21.67■■□□□ 1.06
PTMA-212ENST00000481928 FAM182BQ5T319 152 aa21.67■■□□□ 1.06
PTMA-212ENST00000481928 ZNF428Q96B54 188 aa21.67■■□□□ 1.06
PTMA-212ENST00000481928 CHMP4AQ9BY43 222 aa21.67■■□□□ 1.06
PTMA-212ENST00000481928 HOXB7P09629 217 aa21.66■■□□□ 1.06
PTMA-212ENST00000481928 SMARCC1Q92922 1105 aaPredicted RBP21.66■■□□□ 1.06
PTMA-212ENST00000481928 NHSQ6T4R5 1651 aa21.66■■□□□ 1.06
PTMA-212ENST00000481928 HEG1Q9ULI3 1381 aa21.66■■□□□ 1.06
PTMA-212ENST00000481928 SLC39A6Q13433 755 aa21.66■■□□□ 1.06
PTMA-212ENST00000481928 FMNL2Q96PY5 1086 aa21.66■■□□□ 1.06
PTMA-212ENST00000481928 BCL11BQ9C0K0 894 aaPredicted RBP21.66■■□□□ 1.06
PTMA-212ENST00000481928 ITGB4P16144 1822 aa21.65■■□□□ 1.06
PTMA-212ENST00000481928 PAPPAQ13219 1627 aa21.65■■□□□ 1.06
PTMA-212ENST00000481928 KCNQ2O43526 872 aa21.65■■□□□ 1.06
PTMA-212ENST00000481928 ATG3Q9NT62 314 aa21.65■■□□□ 1.06
PTMA-212ENST00000481928 KCNQ3O43525 872 aa21.64■■□□□ 1.05
PTMA-212ENST00000481928 TWISTNBQ3B726 338 aaPredicted RBP21.64■■□□□ 1.05
PTMA-212ENST00000481928 C8orf58Q8NAV2 365 aa21.63■■□□□ 1.05
PTMA-212ENST00000481928 ZNF496Q96IT1 587 aaPredicted RBP21.63■■□□□ 1.05
PTMA-212ENST00000481928 ASAP1Q9ULH1 1129 aa21.63■■□□□ 1.05
PTMA-212ENST00000481928 VSIG10Q8N0Z9 540 aa21.62■■□□□ 1.05
PTMA-212ENST00000481928 KAT6BQ8WYB5 2073 aa21.61■■□□□ 1.05
PTMA-212ENST00000481928 VAMP4O75379 141 aa21.61■■□□□ 1.05
PTMA-212ENST00000481928 GIGYF1O75420 1035 aaPredicted RBP21.61■■□□□ 1.05
PTMA-212ENST00000481928 SNRPA1P09661 255 aaKnown RBP21.61■■□□□ 1.05
PTMA-212ENST00000481928 KCPQ6ZWJ8 1503 aa21.61■■□□□ 1.05
PTMA-212ENST00000481928 ILDR2Q71H61 639 aa21.61■■□□□ 1.05
PTMA-212ENST00000481928 PALLDQ8WX93 1383 aa21.6■■□□□ 1.05
PTMA-212ENST00000481928 TSPYL6Q8N831 410 aa21.6■■□□□ 1.05
PTMA-212ENST00000481928 UBR2Q8IWV8 1755 aa21.6■■□□□ 1.05
PTMA-212ENST00000481928 SBF2Q86WG5 1849 aa21.59■■□□□ 1.05
PTMA-212ENST00000481928 KRT24Q2M2I5 525 aa21.58■■□□□ 1.05
PTMA-212ENST00000481928 TEX13AQ9BXU3 409 aaPredicted RBP21.58■■□□□ 1.05
PTMA-212ENST00000481928 RCAN3Q9UKA8 241 aa21.58■■□□□ 1.05
PTMA-212ENST00000481928 ELL2O00472 640 aaPredicted RBP21.58■■□□□ 1.04
PTMA-212ENST00000481928 PTCD1O75127 700 aaKnown RBP21.58■■□□□ 1.04
PTMA-212ENST00000481928 TRIM37O94972 964 aa21.57■■□□□ 1.04
PTMA-212ENST00000481928 ALDH1L2Q3SY69 923 aa21.57■■□□□ 1.04
PTMA-212ENST00000481928 RARSP54136 660 aaKnown RBP21.55■■□□□ 1.04
PTMA-212ENST00000481928 CCDC30Q5VVM6 783 aa21.55■■□□□ 1.04
PTMA-212ENST00000481928 PTF1AQ7RTS3 328 aa21.55■■□□□ 1.04
PTMA-212ENST00000481928 BTAF1O14981 1849 aa21.55■■□□□ 1.04
PTMA-212ENST00000481928 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
PTMA-212ENST00000481928 HMGB2P26583 209 aaKnown RBP21.55■■□□□ 1.04
PTMA-212ENST00000481928 SIK1P57059 783 aa21.55■■□□□ 1.04
PTMA-212ENST00000481928 HDGFL1Q5TGJ6 251 aa21.55■■□□□ 1.04
PTMA-212ENST00000481928 RBM42Q9BTD8 480 aaKnown RBP21.55■■□□□ 1.04
PTMA-212ENST00000481928 ERBB4Q15303 1308 aa21.53■■□□□ 1.04
PTMA-212ENST00000481928 BRPF1P55201 1214 aaPredicted RBP21.52■■□□□ 1.04
PTMA-212ENST00000481928 STK31Q9BXU1 1019 aa21.52■■□□□ 1.04
PTMA-212ENST00000481928 ZNF831Q5JPB2 1677 aa21.52■■□□□ 1.04
PTMA-212ENST00000481928 STARD3NLO95772 234 aa21.51■■□□□ 1.03
PTMA-212ENST00000481928 CICQ96RK0 1608 aaPredicted RBP21.51■■□□□ 1.03
PTMA-212ENST00000481928 PLSCR1O15162 318 aa21.51■■□□□ 1.03
PTMA-212ENST00000481928 ATP6V1AP38606 617 aa21.51■■□□□ 1.03
PTMA-212ENST00000481928 SSH1Q8WYL5 1049 aa21.51■■□□□ 1.03
PTMA-212ENST00000481928 SLC4A9Q96Q91 983 aa21.51■■□□□ 1.03
PTMA-212ENST00000481928 SMC4Q9NTJ3 1288 aa21.51■■□□□ 1.03
PTMA-212ENST00000481928 EP400Q96L91 3159 aa21.5■■□□□ 1.03
PTMA-212ENST00000481928 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
PTMA-212ENST00000481928 DBF4Q9UBU7 674 aaPredicted RBP21.5■■□□□ 1.03
PTMA-212ENST00000481928 PRAMEF22A3QJZ6 481 aa21.49■■□□□ 1.03
PTMA-212ENST00000481928 SLC27A3Q5K4L6 730 aa21.49■■□□□ 1.03
PTMA-212ENST00000481928 USP16Q9Y5T5 823 aa21.49■■□□□ 1.03
PTMA-212ENST00000481928 KIF16BQ96L93 1317 aa21.49■■□□□ 1.03
PTMA-212ENST00000481928 DNAJC10Q8IXB1 793 aa21.48■■□□□ 1.03
PTMA-212ENST00000481928 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
PTMA-212ENST00000481928 APBA3O96018 575 aa21.47■■□□□ 1.03
PTMA-212ENST00000481928 CCDC125Q86Z20 511 aa21.47■■□□□ 1.03
PTMA-212ENST00000481928 CCNL1Q9UK58 526 aaPredicted RBP21.47■■□□□ 1.03
PTMA-212ENST00000481928 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.47■■□□□ 1.03
PTMA-212ENST00000481928 DDX21Q9NR30 783 aaKnown RBP eCLIP21.47■■□□□ 1.03
PTMA-212ENST00000481928 C5P01031 1676 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms