RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 CXXC1Q9P0U4 656 aaPredicted RBP12.73□□□□□ -0.37
PDCD4-206ENST00000481353 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
PDCD4-206ENST00000481353 ADH1CP00326 375 aa12.72□□□□□ -0.37
PDCD4-206ENST00000481353 TPCN2Q8NHX9 752 aa12.72□□□□□ -0.37
PDCD4-206ENST00000481353 TIMP2P16035 220 aa12.71□□□□□ -0.37
PDCD4-206ENST00000481353 MPNDQ8N594 471 aa12.71□□□□□ -0.37
PDCD4-206ENST00000481353 EGFL7Q9UHF1 273 aa12.71□□□□□ -0.37
PDCD4-206ENST00000481353 PRMT3O60678 531 aa12.7□□□□□ -0.38
PDCD4-206ENST00000481353 ZFAND3Q9H8U3 227 aa12.7□□□□□ -0.38
PDCD4-206ENST00000481353 CAPN5O15484 640 aaPredicted RBP12.69□□□□□ -0.38
PDCD4-206ENST00000481353 PCDHB11Q9Y5F2 797 aa12.69□□□□□ -0.38
PDCD4-206ENST00000481353 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
PDCD4-206ENST00000481353 M0R2N6 131 aa12.68□□□□□ -0.38
PDCD4-206ENST00000481353 SCNN1AP37088 669 aa12.68□□□□□ -0.38
PDCD4-206ENST00000481353 PSME1Q06323 249 aa12.68□□□□□ -0.38
PDCD4-206ENST00000481353 LOC105371045A0A1W2PR82 267 aa12.67□□□□□ -0.38
PDCD4-206ENST00000481353 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
PDCD4-206ENST00000481353 ITPKCQ96DU7 683 aa12.67□□□□□ -0.38
PDCD4-206ENST00000481353 FSHRP23945 695 aa12.66□□□□□ -0.38
PDCD4-206ENST00000481353 WDR4P57081 412 aaKnown RBP12.66□□□□□ -0.38
PDCD4-206ENST00000481353 PRIMPOLQ96LW4 560 aa12.66□□□□□ -0.38
PDCD4-206ENST00000481353 MARSP56192 900 aaKnown RBP12.65□□□□□ -0.38
PDCD4-206ENST00000481353 NOM1Q5C9Z4 860 aaKnown RBP12.65□□□□□ -0.38
PDCD4-206ENST00000481353 LCE2CQ5TA81 110 aa12.65□□□□□ -0.38
PDCD4-206ENST00000481353 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
PDCD4-206ENST00000481353 UNCXA6NJT0 531 aa12.63□□□□□ -0.39
PDCD4-206ENST00000481353 WEE1P30291 646 aa12.63□□□□□ -0.39
PDCD4-206ENST00000481353 TRIM47Q96LD4 638 aa12.63□□□□□ -0.39
PDCD4-206ENST00000481353 KCTD15Q96SI1 283 aaPredicted RBP12.63□□□□□ -0.39
PDCD4-206ENST00000481353 MAP4K5Q9Y4K4 846 aa12.63□□□□□ -0.39
PDCD4-206ENST00000481353 ZIC2O95409 532 aaPredicted RBP12.62□□□□□ -0.39
PDCD4-206ENST00000481353 MYCP01106 439 aaPredicted RBP12.62□□□□□ -0.39
PDCD4-206ENST00000481353 VASH1Q7L8A9 365 aaPredicted RBP12.62□□□□□ -0.39
PDCD4-206ENST00000481353 ICMTO60725 284 aa12.61□□□□□ -0.39
PDCD4-206ENST00000481353 HINFPQ9BQA5 517 aa12.61□□□□□ -0.39
PDCD4-206ENST00000481353 LCE2AQ5TA79 106 aaPredicted RBP12.6□□□□□ -0.39
PDCD4-206ENST00000481353 ZFP42Q96MM3 310 aa12.6□□□□□ -0.39
PDCD4-206ENST00000481353 ABL1P00519 1130 aa12.59□□□□□ -0.39
PDCD4-206ENST00000481353 INTS6LQ5JSJ4 861 aaKnown RBP12.59□□□□□ -0.39
PDCD4-206ENST00000481353 TSEN2Q8NCE0 465 aaKnown RBP12.59□□□□□ -0.39
PDCD4-206ENST00000481353 SOBPA7XYQ1 873 aa12.58□□□□□ -0.4
PDCD4-206ENST00000481353 H3BRB1 525 aa12.58□□□□□ -0.4
PDCD4-206ENST00000481353 NR5A1Q13285 461 aa12.58□□□□□ -0.4
PDCD4-206ENST00000481353 TUT1Q9H6E5 874 aaKnown RBP12.58□□□□□ -0.4
PDCD4-206ENST00000481353 C21orf2O43822 256 aa12.57□□□□□ -0.4
PDCD4-206ENST00000481353 PTCD1O75127 700 aaKnown RBP12.57□□□□□ -0.4
PDCD4-206ENST00000481353 ZNF211Q13398 564 aaPredicted RBP12.57□□□□□ -0.4
PDCD4-206ENST00000481353 COL26A1Q96A83 441 aa12.57□□□□□ -0.4
PDCD4-206ENST00000481353 PURBQ96QR8 312 aaKnown RBP12.57□□□□□ -0.4
PDCD4-206ENST00000481353 ERVH48-1M5A8F1 160 aa12.56□□□□□ -0.4
PDCD4-206ENST00000481353 SCTRP47872 440 aa12.56□□□□□ -0.4
PDCD4-206ENST00000481353 ERVK-9P63128 1117 aa12.56□□□□□ -0.4
PDCD4-206ENST00000481353 FKBP5Q13451 457 aaPredicted RBP12.56□□□□□ -0.4
PDCD4-206ENST00000481353 MRPL14Q6P1L8 145 aaKnown RBP12.56□□□□□ -0.4
PDCD4-206ENST00000481353 NPAS4Q8IUM7 802 aa12.56□□□□□ -0.4
PDCD4-206ENST00000481353 GLYCTKQ8IVS8 523 aa12.56□□□□□ -0.4
PDCD4-206ENST00000481353 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDCD4-206ENST00000481353 GTF3C2Q8WUA4 911 aaPredicted RBP12.56□□□□□ -0.4
PDCD4-206ENST00000481353 ZNF358Q9NW07 568 aa12.56□□□□□ -0.4
PDCD4-206ENST00000481353 ANKRD33BA6NCL7 494 aa12.55□□□□□ -0.4
PDCD4-206ENST00000481353 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
PDCD4-206ENST00000481353 ZNF16P17020 682 aaPredicted RBP12.55□□□□□ -0.4
PDCD4-206ENST00000481353 SF3B2Q13435 895 aaKnown RBP12.55□□□□□ -0.4
PDCD4-206ENST00000481353 TRIM52Q96A61 297 aa12.55□□□□□ -0.4
PDCD4-206ENST00000481353 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
PDCD4-206ENST00000481353 SEPT3Q9UH03 358 aa12.55□□□□□ -0.4
PDCD4-206ENST00000481353 TMEM229AB2RXF0 380 aa12.54□□□□□ -0.4
PDCD4-206ENST00000481353 RAB15P59190 212 aa12.54□□□□□ -0.4
PDCD4-206ENST00000481353 CBLBQ13191 982 aa12.54□□□□□ -0.4
PDCD4-206ENST00000481353 ECM1Q16610 540 aa12.54□□□□□ -0.4
PDCD4-206ENST00000481353 IGSF5Q9NSI5 407 aa12.54□□□□□ -0.4
PDCD4-206ENST00000481353 LGR5O75473 907 aa12.53□□□□□ -0.4
PDCD4-206ENST00000481353 IGFBP4P22692 258 aa12.53□□□□□ -0.4
PDCD4-206ENST00000481353 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
PDCD4-206ENST00000481353 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
PDCD4-206ENST00000481353 CC2D2BQ6DHV5 1058 aa12.53□□□□□ -0.4
PDCD4-206ENST00000481353 ANO2Q9NQ90 1003 aa12.53□□□□□ -0.4
PDCD4-206ENST00000481353 DNMT3AQ9Y6K1 912 aaPredicted RBP12.53□□□□□ -0.4
PDCD4-206ENST00000481353 ABCC9O60706 1549 aa12.52□□□□□ -0.4
PDCD4-206ENST00000481353 FOXO3O43524 673 aa12.52□□□□□ -0.41
PDCD4-206ENST00000481353 NFX1Q12986 1120 aaKnown RBP12.52□□□□□ -0.41
PDCD4-206ENST00000481353 C6orf118Q5T5N4 469 aa12.52□□□□□ -0.41
PDCD4-206ENST00000481353 CCDC116Q8IYX3 515 aa12.52□□□□□ -0.41
PDCD4-206ENST00000481353 MKNK1Q9BUB5 465 aa12.52□□□□□ -0.41
PDCD4-206ENST00000481353 KIAA1522Q9P206 1035 aaPredicted RBP12.52□□□□□ -0.41
PDCD4-206ENST00000481353 SCNN1DP51172 638 aa12.51□□□□□ -0.41
PDCD4-206ENST00000481353 MEIOBQ8N635 442 aa12.51□□□□□ -0.41
PDCD4-206ENST00000481353 MRRFQ96E11 262 aaKnown RBP12.51□□□□□ -0.41
PDCD4-206ENST00000481353 OSBPL3Q9H4L5 887 aa12.51□□□□□ -0.41
PDCD4-206ENST00000481353 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
PDCD4-206ENST00000481353 TMPRSS4Q9NRS4 437 aa12.51□□□□□ -0.41
PDCD4-206ENST00000481353 ESF1Q9H501 851 aaKnown RBP12.5□□□□□ -0.41
PDCD4-206ENST00000481353 DCTN4Q9UJW0 460 aa12.5□□□□□ -0.41
PDCD4-206ENST00000481353 BACH1O14867 736 aa12.49□□□□□ -0.41
PDCD4-206ENST00000481353 VEGFBP49765 207 aa12.49□□□□□ -0.41
PDCD4-206ENST00000481353 ARHGAP4P98171 946 aa12.49□□□□□ -0.41
PDCD4-206ENST00000481353 DHX9Q08211 1270 aaKnown RBP12.49□□□□□ -0.41
PDCD4-206ENST00000481353 CAPN12Q6ZSI9 719 aa12.49□□□□□ -0.41
PDCD4-206ENST00000481353 ASB16Q96NS5 453 aa12.49□□□□□ -0.41
PDCD4-206ENST00000481353 CENPBP07199 599 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms