RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
KDM4A-204ENST00000481296 IL17REQ8NFR9 667 aa12.54□□□□□ -0.4
KDM4A-204ENST00000481296 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
KDM4A-204ENST00000481296 TAF1LQ8IZX4 1826 aa12.53□□□□□ -0.4
KDM4A-204ENST00000481296 WDR63Q8IWG1 891 aa12.53□□□□□ -0.4
KDM4A-204ENST00000481296 LGR6Q9HBX8 967 aa12.53□□□□□ -0.4
KDM4A-204ENST00000481296 IL16Q14005 1332 aa12.53□□□□□ -0.4
KDM4A-204ENST00000481296 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.4
KDM4A-204ENST00000481296 CABP4P57796 275 aa12.51□□□□□ -0.41
KDM4A-204ENST00000481296 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
KDM4A-204ENST00000481296 SLC52A2Q9HAB3 445 aa12.51□□□□□ -0.41
KDM4A-204ENST00000481296 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
KDM4A-204ENST00000481296 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
KDM4A-204ENST00000481296 ERVV-2B6SEH9 535 aa12.5□□□□□ -0.41
KDM4A-204ENST00000481296 GNAI1P63096 354 aa12.5□□□□□ -0.41
KDM4A-204ENST00000481296 FAM182BQ5T319 152 aa12.5□□□□□ -0.41
KDM4A-204ENST00000481296 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
KDM4A-204ENST00000481296 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
KDM4A-204ENST00000481296 RREB1Q92766 1687 aa12.49□□□□□ -0.41
KDM4A-204ENST00000481296 FANCIQ9NVI1 1328 aa12.49□□□□□ -0.41
KDM4A-204ENST00000481296 E9PSI1 815 aa12.49□□□□□ -0.41
KDM4A-204ENST00000481296 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
KDM4A-204ENST00000481296 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
KDM4A-204ENST00000481296 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
KDM4A-204ENST00000481296 TSPYL4Q9UJ04 414 aa12.49□□□□□ -0.41
KDM4A-204ENST00000481296 TAF7Q15545 349 aaPredicted RBP12.48□□□□□ -0.41
KDM4A-204ENST00000481296 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
KDM4A-204ENST00000481296 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
KDM4A-204ENST00000481296 MYH16Q9H6N6 1097 aa12.48□□□□□ -0.41
KDM4A-204ENST00000481296 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
KDM4A-204ENST00000481296 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
KDM4A-204ENST00000481296 ZNF853P0CG23 659 aa12.47□□□□□ -0.41
KDM4A-204ENST00000481296 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
KDM4A-204ENST00000481296 SLFN5Q08AF3 891 aa12.47□□□□□ -0.41
KDM4A-204ENST00000481296 NFATC2IPQ8NCF5 419 aa12.47□□□□□ -0.41
KDM4A-204ENST00000481296 TSR2Q969E8 191 aaKnown RBP12.47□□□□□ -0.41
KDM4A-204ENST00000481296 MBIPQ9NS73 344 aa12.47□□□□□ -0.41
KDM4A-204ENST00000481296 BABAM1Q9NWV8 329 aa12.47□□□□□ -0.41
KDM4A-204ENST00000481296 CHL1O00533 1208 aa12.46□□□□□ -0.41
KDM4A-204ENST00000481296 NUP188Q5SRE5 1749 aa12.45□□□□□ -0.42
KDM4A-204ENST00000481296 TTC5Q8N0Z6 440 aa12.45□□□□□ -0.42
KDM4A-204ENST00000481296 PIGBQ92521 554 aa12.45□□□□□ -0.42
KDM4A-204ENST00000481296 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
KDM4A-204ENST00000481296 TUBGCP6Q96RT7 1819 aa12.45□□□□□ -0.42
KDM4A-204ENST00000481296 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
KDM4A-204ENST00000481296 KCNQ2O43526 872 aa12.44□□□□□ -0.42
KDM4A-204ENST00000481296 SLC39A6Q13433 755 aa12.44□□□□□ -0.42
KDM4A-204ENST00000481296 DUSP27Q5VZP5 1158 aa12.44□□□□□ -0.42
KDM4A-204ENST00000481296 ZNF790Q6PG37 636 aa12.44□□□□□ -0.42
KDM4A-204ENST00000481296 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
KDM4A-204ENST00000481296 C4BP0C0L5 1744 aa12.43□□□□□ -0.42
KDM4A-204ENST00000481296 TRMT2AQ8IZ69 625 aaKnown RBP12.43□□□□□ -0.42
KDM4A-204ENST00000481296 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
KDM4A-204ENST00000481296 EP400Q96L91 3159 aa12.42□□□□□ -0.42
KDM4A-204ENST00000481296 KCNQ3O43525 872 aa12.42□□□□□ -0.42
KDM4A-204ENST00000481296 TRIM37O94972 964 aa12.42□□□□□ -0.42
KDM4A-204ENST00000481296 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
KDM4A-204ENST00000481296 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
KDM4A-204ENST00000481296 ASAP1Q9ULH1 1129 aa12.42□□□□□ -0.42
KDM4A-204ENST00000481296 C4AP0C0L4 1744 aa12.42□□□□□ -0.42
KDM4A-204ENST00000481296 UBR3Q6ZT12 1888 aa12.42□□□□□ -0.42
KDM4A-204ENST00000481296 MYH14Q7Z406 1995 aaKnown RBP12.41□□□□□ -0.42
KDM4A-204ENST00000481296 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
KDM4A-204ENST00000481296 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
KDM4A-204ENST00000481296 EXOSC9Q06265 439 aaKnown RBP12.41□□□□□ -0.42
KDM4A-204ENST00000481296 QSER1Q2KHR3 1735 aa12.41□□□□□ -0.42
KDM4A-204ENST00000481296 PTF1AQ7RTS3 328 aa12.41□□□□□ -0.42
KDM4A-204ENST00000481296 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
KDM4A-204ENST00000481296 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
KDM4A-204ENST00000481296 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
KDM4A-204ENST00000481296 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
KDM4A-204ENST00000481296 ZNF496Q96IT1 587 aaPredicted RBP12.4□□□□□ -0.42
KDM4A-204ENST00000481296 ANKRD36CQ5JPF3 1778 aa12.4□□□□□ -0.42
KDM4A-204ENST00000481296 SCN7AQ01118 1682 aa12.39□□□□□ -0.43
KDM4A-204ENST00000481296 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
KDM4A-204ENST00000481296 TWISTNBQ3B726 338 aaPredicted RBP12.39□□□□□ -0.43
KDM4A-204ENST00000481296 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
KDM4A-204ENST00000481296 CENPBP07199 599 aaPredicted RBP12.38□□□□□ -0.43
KDM4A-204ENST00000481296 HOXB7P09629 217 aa12.38□□□□□ -0.43
KDM4A-204ENST00000481296 C8orf58Q8NAV2 365 aa12.38□□□□□ -0.43
KDM4A-204ENST00000481296 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
KDM4A-204ENST00000481296 AFDNP55196 1824 aaKnown RBP12.38□□□□□ -0.43
KDM4A-204ENST00000481296 LOC102724428A0A0B4J2F2 783 aa12.37□□□□□ -0.43
KDM4A-204ENST00000481296 ELL2O00472 640 aaPredicted RBP12.37□□□□□ -0.43
KDM4A-204ENST00000481296 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
KDM4A-204ENST00000481296 CT47B1P0C2W7 299 aaPredicted RBP12.37□□□□□ -0.43
KDM4A-204ENST00000481296 SIK1P57059 783 aa12.37□□□□□ -0.43
KDM4A-204ENST00000481296 TSPYL6Q8N831 410 aa12.37□□□□□ -0.43
KDM4A-204ENST00000481296 GIGYF1O75420 1035 aaPredicted RBP12.36□□□□□ -0.43
KDM4A-204ENST00000481296 VSIG10Q8N0Z9 540 aa12.36□□□□□ -0.43
KDM4A-204ENST00000481296 PRAMEF22A3QJZ6 481 aa12.35□□□□□ -0.43
KDM4A-204ENST00000481296 APBA3O96018 575 aa12.35□□□□□ -0.43
KDM4A-204ENST00000481296 SF3B2Q13435 895 aaKnown RBP12.35□□□□□ -0.43
KDM4A-204ENST00000481296 HDGFL1Q5TGJ6 251 aa12.35□□□□□ -0.43
KDM4A-204ENST00000481296 SLC4A9Q96Q91 983 aa12.35□□□□□ -0.43
KDM4A-204ENST00000481296 CCNL1Q9UK58 526 aaPredicted RBP12.35□□□□□ -0.43
KDM4A-204ENST00000481296 NUP98P52948 1817 aa12.34□□□□□ -0.43
KDM4A-204ENST00000481296 VAMP4O75379 141 aa12.34□□□□□ -0.43
KDM4A-204ENST00000481296 ATP6V1AP38606 617 aa12.34□□□□□ -0.43
KDM4A-204ENST00000481296 DNAJC10Q8IXB1 793 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms