RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 KDM6AO15550 1401 aaPredicted RBP12.95□□□□□ -0.34
GTF3C2-210ENST00000480989 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
GTF3C2-210ENST00000480989 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
GTF3C2-210ENST00000480989 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
GTF3C2-210ENST00000480989 SSFA2P28290 1259 aa12.93□□□□□ -0.34
GTF3C2-210ENST00000480989 TRIM26Q12899 539 aaPredicted RBP12.93□□□□□ -0.34
GTF3C2-210ENST00000480989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■□□□ 14.5
GTF3C2-210ENST00000480989 SPG7Q9UQ90 795 aa12.93□□□□□ -0.34
GTF3C2-210ENST00000480989 ADAMTS7Q9UKP4 1686 aa12.93□□□□□ -0.34
GTF3C2-210ENST00000480989 TJP1Q07157 1748 aa12.92□□□□□ -0.34
GTF3C2-210ENST00000480989 TMOD3Q9NYL9 352 aa12.92□□□□□ -0.34
GTF3C2-210ENST00000480989 GNPATO15228 680 aa12.91□□□□□ -0.34
GTF3C2-210ENST00000480989 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
GTF3C2-210ENST00000480989 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
GTF3C2-210ENST00000480989 C10orf71Q711Q0 1435 aa12.9□□□□□ -0.34
GTF3C2-210ENST00000480989 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
GTF3C2-210ENST00000480989 MMP10P09238 476 aa12.89□□□□□ -0.35
GTF3C2-210ENST00000480989 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
GTF3C2-210ENST00000480989 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
GTF3C2-210ENST00000480989 VIRMAQ69YN4 1812 aaKnown RBP12.89□□□□□ -0.35
GTF3C2-210ENST00000480989 PLEKHG2Q9H7P9 1386 aa12.89□□□□□ -0.35
GTF3C2-210ENST00000480989 SCN11AQ9UI33 1791 aa12.89□□□□□ -0.35
GTF3C2-210ENST00000480989 KIF3CO14782 793 aa12.87□□□□□ -0.35
GTF3C2-210ENST00000480989 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
GTF3C2-210ENST00000480989 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
GTF3C2-210ENST00000480989 ARFGEF1Q9Y6D6 1849 aa12.86□□□□□ -0.35
GTF3C2-210ENST00000480989 GYS1P13807 737 aa12.86□□□□□ -0.35
GTF3C2-210ENST00000480989 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
GTF3C2-210ENST00000480989 PANK3Q9H999 370 aa12.86□□□□□ -0.35
GTF3C2-210ENST00000480989 GPBP1L1Q9HC44 474 aaPredicted RBP12.86□□□□□ -0.35
GTF3C2-210ENST00000480989 CNTNAP4Q9C0A0 1308 aa12.86□□□□□ -0.35
GTF3C2-210ENST00000480989 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
GTF3C2-210ENST00000480989 KCNA3P22001 575 aa12.85□□□□□ -0.35
GTF3C2-210ENST00000480989 TIMELESSQ9UNS1 1208 aa12.85□□□□□ -0.35
GTF3C2-210ENST00000480989 A0A0G2JLW4 131 aa12.84□□□□□ -0.35
GTF3C2-210ENST00000480989 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
GTF3C2-210ENST00000480989 DCAF5Q96JK2 942 aa12.84□□□□□ -0.35
GTF3C2-210ENST00000480989 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
GTF3C2-210ENST00000480989 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
GTF3C2-210ENST00000480989 TRAPPC3LQ5T215 181 aa12.83□□□□□ -0.36
GTF3C2-210ENST00000480989 RC3H1Q5TC82 1133 aaKnown RBP12.83□□□□□ -0.36
GTF3C2-210ENST00000480989 RTCBQ9Y3I0 505 aaKnown RBP12.83□□□□□ -0.36
GTF3C2-210ENST00000480989 RPS6KA4O75676 772 aa12.82□□□□□ -0.36
GTF3C2-210ENST00000480989 DPEP1P16444 411 aa12.82□□□□□ -0.36
GTF3C2-210ENST00000480989 HSPA6P17066 643 aa12.82□□□□□ -0.36
GTF3C2-210ENST00000480989 DDR1Q08345 913 aa12.82□□□□□ -0.36
GTF3C2-210ENST00000480989 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
GTF3C2-210ENST00000480989 AFDNP55196 1824 aaKnown RBP12.82□□□□□ -0.36
GTF3C2-210ENST00000480989 MRC1P22897 1456 aa12.82□□□□□ -0.36
GTF3C2-210ENST00000480989 CLSPNQ9HAW4 1339 aa12.82□□□□□ -0.36
GTF3C2-210ENST00000480989 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
GTF3C2-210ENST00000480989 SBF1O95248 1867 aa12.81□□□□□ -0.36
GTF3C2-210ENST00000480989 IL13P35225 146 aa12.81□□□□□ -0.36
GTF3C2-210ENST00000480989 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
GTF3C2-210ENST00000480989 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
GTF3C2-210ENST00000480989 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
GTF3C2-210ENST00000480989 UBR2Q8IWV8 1755 aa12.8□□□□□ -0.36
GTF3C2-210ENST00000480989 PTCD1O75127 700 aaKnown RBP12.8□□□□□ -0.36
GTF3C2-210ENST00000480989 CRKLP46109 303 aaKnown RBP12.8□□□□□ -0.36
GTF3C2-210ENST00000480989 TGFB2P61812 414 aa12.8□□□□□ -0.36
GTF3C2-210ENST00000480989 FKBP8Q14318 412 aa12.8□□□□□ -0.36
GTF3C2-210ENST00000480989 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
GTF3C2-210ENST00000480989 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
GTF3C2-210ENST00000480989 PCGF6Q9BYE7 350 aa12.8□□□□□ -0.36
GTF3C2-210ENST00000480989 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
GTF3C2-210ENST00000480989 CABP4P57796 275 aa12.79□□□□□ -0.36
GTF3C2-210ENST00000480989 EIF4G2P78344 907 aaKnown RBP eCLIP12.79□□□□□ -0.36
GTF3C2-210ENST00000480989 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
GTF3C2-210ENST00000480989 IFFO2Q5TF58 517 aa12.79□□□□□ -0.36
GTF3C2-210ENST00000480989 SULT6B1Q6IMI4 303 aa12.79□□□□□ -0.36
GTF3C2-210ENST00000480989 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
GTF3C2-210ENST00000480989 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
GTF3C2-210ENST00000480989 MTHFSP49914 203 aa12.78□□□□□ -0.36
GTF3C2-210ENST00000480989 AMOTQ4VCS5 1084 aa12.78□□□□□ -0.36
GTF3C2-210ENST00000480989 LGR6Q9HBX8 967 aa12.78□□□□□ -0.36
GTF3C2-210ENST00000480989 NMRK2Q9NPI5 230 aa12.78□□□□□ -0.36
GTF3C2-210ENST00000480989 DLEC1Q9Y238 1755 aa12.78□□□□□ -0.36
GTF3C2-210ENST00000480989 RFC4P35249 363 aa12.77□□□□□ -0.37
GTF3C2-210ENST00000480989 MORC1Q86VD1 984 aa12.77□□□□□ -0.37
GTF3C2-210ENST00000480989 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.37
GTF3C2-210ENST00000480989 WDR90Q96KV7 1748 aa12.76□□□□□ -0.37
GTF3C2-210ENST00000480989 POLRMTO00411 1230 aaKnown RBP12.76□□□□□ -0.37
GTF3C2-210ENST00000480989 CHRNA5P30532 468 aa12.76□□□□□ -0.37
GTF3C2-210ENST00000480989 SLC39A6Q13433 755 aa12.76□□□□□ -0.37
GTF3C2-210ENST00000480989 CCDC87Q9NVE4 849 aa12.76□□□□□ -0.37
GTF3C2-210ENST00000480989 SOS1Q07889 1333 aaPredicted RBP12.76□□□□□ -0.37
GTF3C2-210ENST00000480989 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
GTF3C2-210ENST00000480989 SIPA1L3O60292 1781 aaPredicted RBP12.76□□□□□ -0.37
GTF3C2-210ENST00000480989 FCHSD2O94868 740 aa12.75□□□□□ -0.37
GTF3C2-210ENST00000480989 TM4SF1P30408 202 aa12.75□□□□□ -0.37
GTF3C2-210ENST00000480989 PRELPP51888 382 aa12.75□□□□□ -0.37
GTF3C2-210ENST00000480989 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
GTF3C2-210ENST00000480989 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
GTF3C2-210ENST00000480989 DNAJC5GQ8N7S2 189 aa12.75□□□□□ -0.37
GTF3C2-210ENST00000480989 ANKRD31Q8N7Z5 1873 aa12.75□□□□□ -0.37
GTF3C2-210ENST00000480989 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
GTF3C2-210ENST00000480989 KIF7Q2M1P5 1343 aa12.74□□□□□ -0.37
GTF3C2-210ENST00000480989 C9orf131Q5VYM1 1079 aa12.74□□□□□ -0.37
GTF3C2-210ENST00000480989 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
GTF3C2-210ENST00000480989 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms