RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 NFATC2IPQ8NCF5 419 aa20.02■□□□□ 0.8
ABCF3-213ENST00000480539 IL17REQ8NFR9 667 aa20.02■□□□□ 0.8
ABCF3-213ENST00000480539 RTF1Q92541 710 aaKnown RBP20.02■□□□□ 0.8
ABCF3-213ENST00000480539 CEMIPQ8WUJ3 1361 aa20.02■□□□□ 0.8
ABCF3-213ENST00000480539 KCNQ4P56696 695 aa20.01■□□□□ 0.79
ABCF3-213ENST00000480539 DCTN1Q14203 1278 aa20.01■□□□□ 0.79
ABCF3-213ENST00000480539 PNISRQ8TF01 805 aaKnown RBP20.01■□□□□ 0.79
ABCF3-213ENST00000480539 RRP7AQ9Y3A4 280 aaKnown RBP20.01■□□□□ 0.79
ABCF3-213ENST00000480539 TEFQ10587 303 aa20■□□□□ 0.79
ABCF3-213ENST00000480539 SMARCC1Q92922 1105 aaPredicted RBP20■□□□□ 0.79
ABCF3-213ENST00000480539 ATG3Q9NT62 314 aa20■□□□□ 0.79
ABCF3-213ENST00000480539 LRRC4BQ9NT99 713 aa20■□□□□ 0.79
ABCF3-213ENST00000480539 CCNL1Q9UK58 526 aaPredicted RBP20■□□□□ 0.79
ABCF3-213ENST00000480539 C5P01031 1676 aa20■□□□□ 0.79
ABCF3-213ENST00000480539 ANO8Q9HCE9 1232 aaPredicted RBP19.99■□□□□ 0.79
ABCF3-213ENST00000480539 TMPOP42166 694 aaKnown RBP19.98■□□□□ 0.79
ABCF3-213ENST00000480539 RIPK4P57078 832 aa19.97■□□□□ 0.79
ABCF3-213ENST00000480539 NEUROD2Q15784 382 aa19.97■□□□□ 0.79
ABCF3-213ENST00000480539 SLC27A3Q5K4L6 730 aa19.97■□□□□ 0.79
ABCF3-213ENST00000480539 FAM9BQ8IZU0 186 aa19.97■□□□□ 0.79
ABCF3-213ENST00000480539 THUMPD2Q9BTF0 503 aaKnown RBP19.97■□□□□ 0.79
ABCF3-213ENST00000480539 KCPQ6ZWJ8 1503 aa19.97■□□□□ 0.79
ABCF3-213ENST00000480539 HTATSF1O43719 755 aaKnown RBP19.96■□□□□ 0.79
ABCF3-213ENST00000480539 SLC39A6Q13433 755 aa19.96■□□□□ 0.79
ABCF3-213ENST00000480539 RBM42Q9BTD8 480 aaKnown RBP19.96■□□□□ 0.79
ABCF3-213ENST00000480539 UBR2Q8IWV8 1755 aa19.95■□□□□ 0.78
ABCF3-213ENST00000480539 SENP3-EIF4A1A0A087X0R7 540 aa19.95■□□□□ 0.78
ABCF3-213ENST00000480539 TAF1LQ8IZX4 1826 aa19.95■□□□□ 0.78
ABCF3-213ENST00000480539 TJP1Q07157 1748 aa19.94■□□□□ 0.78
ABCF3-213ENST00000480539 LOC102724428A0A0B4J2F2 783 aa19.94■□□□□ 0.78
ABCF3-213ENST00000480539 APAF1O14727 1248 aa19.94■□□□□ 0.78
ABCF3-213ENST00000480539 PTCD1O75127 700 aaKnown RBP19.94■□□□□ 0.78
ABCF3-213ENST00000480539 SIK1P57059 783 aa19.94■□□□□ 0.78
ABCF3-213ENST00000480539 MIER1Q8N108 512 aa19.94■□□□□ 0.78
ABCF3-213ENST00000480539 PSDA5PKW4 1024 aaPredicted RBP19.93■□□□□ 0.78
ABCF3-213ENST00000480539 LMOD3Q0VAK6 560 aa19.93■□□□□ 0.78
ABCF3-213ENST00000480539 R3HDM1Q15032 1099 aaKnown RBP19.93■□□□□ 0.78
ABCF3-213ENST00000480539 ZNF827Q17R98 1081 aa19.93■□□□□ 0.78
ABCF3-213ENST00000480539 C4BP0C0L5 1744 aa19.93■□□□□ 0.78
ABCF3-213ENST00000480539 CICQ96RK0 1608 aaPredicted RBP19.92■□□□□ 0.78
ABCF3-213ENST00000480539 ZNF831Q5JPB2 1677 aa19.92■□□□□ 0.78
ABCF3-213ENST00000480539 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
ABCF3-213ENST00000480539 NBPF14Q5TI25 921 aa19.92■□□□□ 0.78
ABCF3-213ENST00000480539 SLC4A9Q96Q91 983 aa19.92■□□□□ 0.78
ABCF3-213ENST00000480539 TUBGCP6Q96RT7 1819 aa19.92■□□□□ 0.78
ABCF3-213ENST00000480539 COL5A3P25940 1745 aaPredicted RBP19.91■□□□□ 0.78
ABCF3-213ENST00000480539 BTBD11A6QL63 1104 aa19.91■□□□□ 0.78
ABCF3-213ENST00000480539 ATP6V1AP38606 617 aa19.91■□□□□ 0.78
ABCF3-213ENST00000480539 ITPK1Q13572 414 aa19.91■□□□□ 0.78
ABCF3-213ENST00000480539 TTC5Q8N0Z6 440 aa19.91■□□□□ 0.78
ABCF3-213ENST00000480539 STK32BQ9NY57 414 aa19.91■□□□□ 0.78
ABCF3-213ENST00000480539 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
ABCF3-213ENST00000480539 KDM3BQ7LBC6 1761 aa19.9■□□□□ 0.78
ABCF3-213ENST00000480539 LINC00116Q8NCU8 138 aa19.9■□□□□ 0.78
ABCF3-213ENST00000480539 ZNF790Q6PG37 636 aa19.89■□□□□ 0.77
ABCF3-213ENST00000480539 KCNQ3O43525 872 aa19.88■□□□□ 0.77
ABCF3-213ENST00000480539 SLC15A2Q16348 729 aa19.88■□□□□ 0.77
ABCF3-213ENST00000480539 AKT1S1Q96B36 256 aa19.88■□□□□ 0.77
ABCF3-213ENST00000480539 TAF7Q15545 349 aaPredicted RBP19.87■□□□□ 0.77
ABCF3-213ENST00000480539 MIS18AQ9NYP9 233 aa19.87■□□□□ 0.77
ABCF3-213ENST00000480539 CASZ1Q86V15 1759 aa19.86■□□□□ 0.77
ABCF3-213ENST00000480539 ZNF496Q96IT1 587 aaPredicted RBP19.86■□□□□ 0.77
ABCF3-213ENST00000480539 QSER1Q2KHR3 1735 aa19.85■□□□□ 0.77
ABCF3-213ENST00000480539 AK7Q96M32 723 aa19.85■□□□□ 0.77
ABCF3-213ENST00000480539 HEG1Q9ULI3 1381 aa19.84■□□□□ 0.77
ABCF3-213ENST00000480539 DNAJC10Q8IXB1 793 aa19.84■□□□□ 0.77
ABCF3-213ENST00000480539 TFCP2L1Q9NZI6 479 aa19.84■□□□□ 0.77
ABCF3-213ENST00000480539 UBR3Q6ZT12 1888 aa19.84■□□□□ 0.77
ABCF3-213ENST00000480539 FMNL2Q96PY5 1086 aa19.83■□□□□ 0.77
ABCF3-213ENST00000480539 TSPYL4Q9UJ04 414 aa19.83■□□□□ 0.77
ABCF3-213ENST00000480539 SALL2Q9Y467 1007 aaPredicted RBP19.83■□□□□ 0.77
ABCF3-213ENST00000480539 PNPLA7Q6ZV29 1317 aa19.82■□□□□ 0.76
ABCF3-213ENST00000480539 PDGFDQ9GZP0 370 aaPredicted RBP19.82■□□□□ 0.76
ABCF3-213ENST00000480539 LAS1LQ9Y4W2 734 aaKnown RBP19.82■□□□□ 0.76
ABCF3-213ENST00000480539 CNTNAP4Q9C0A0 1308 aa19.81■□□□□ 0.76
ABCF3-213ENST00000480539 GNPATO15228 680 aa19.81■□□□□ 0.76
ABCF3-213ENST00000480539 PHF14O94880 888 aa19.81■□□□□ 0.76
ABCF3-213ENST00000480539 SMIM5Q71RC9 77 aa19.81■□□□□ 0.76
ABCF3-213ENST00000480539 AMIGO3Q86WK7 504 aa19.81■□□□□ 0.76
ABCF3-213ENST00000480539 LAMB4A4D0S4 1761 aa19.8■□□□□ 0.76
ABCF3-213ENST00000480539 CRKLP46109 303 aaKnown RBP19.8■□□□□ 0.76
ABCF3-213ENST00000480539 VSIG10Q8N0Z9 540 aa19.8■□□□□ 0.76
ABCF3-213ENST00000480539 PRAMEF22A3QJZ6 481 aa19.79■□□□□ 0.76
ABCF3-213ENST00000480539 MYH14Q7Z406 1995 aaKnown RBP19.78■□□□□ 0.76
ABCF3-213ENST00000480539 CYP19A1P11511 503 aaPredicted RBP19.78■□□□□ 0.76
ABCF3-213ENST00000480539 HMGB2P26583 209 aaKnown RBP19.78■□□□□ 0.76
ABCF3-213ENST00000480539 CCDC27Q2M243 656 aa19.78■□□□□ 0.76
ABCF3-213ENST00000480539 EIF4A1P60842 406 aaKnown RBP19.77■□□□□ 0.76
ABCF3-213ENST00000480539 WWC1Q8IX03 1113 aa19.77■□□□□ 0.76
ABCF3-213ENST00000480539 CCDC87Q9NVE4 849 aa19.77■□□□□ 0.76
ABCF3-213ENST00000480539 C4AP0C0L4 1744 aa19.76■□□□□ 0.75
ABCF3-213ENST00000480539 MSH5O43196 834 aa19.76■□□□□ 0.75
ABCF3-213ENST00000480539 CALD1Q05682 793 aaKnown RBP19.76■□□□□ 0.75
ABCF3-213ENST00000480539 RC3H1Q5TC82 1133 aaKnown RBP19.76■□□□□ 0.75
ABCF3-213ENST00000480539 ZBTB1Q9Y2K1 713 aa19.76■□□□□ 0.75
ABCF3-213ENST00000480539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.75■□□□□ 0.75
ABCF3-213ENST00000480539 CHL1O00533 1208 aa19.75■□□□□ 0.75
ABCF3-213ENST00000480539 ZBTB7AO95365 584 aa19.75■□□□□ 0.75
ABCF3-213ENST00000480539 SNRPA1P09661 255 aaKnown RBP19.75■□□□□ 0.75
ABCF3-213ENST00000480539 SSFA2P28290 1259 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms