RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
COMMD4-203ENST00000480484 SPATA32Q96LK8 384 aa12.45□□□□□ -0.42
COMMD4-203ENST00000480484 AK7Q96M32 723 aa12.45□□□□□ -0.42
COMMD4-203ENST00000480484 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
COMMD4-203ENST00000480484 HMOX1P09601 288 aa12.45□□□□□ -0.42
COMMD4-203ENST00000480484 OTUD7AQ8TE49 926 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-203ENST00000480484 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
COMMD4-203ENST00000480484 DDX19BQ9UMR2 479 aa12.45□□□□□ -0.42
COMMD4-203ENST00000480484 TOPAZ1Q8N9V7 1692 aa12.45□□□□□ -0.42
COMMD4-203ENST00000480484 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
COMMD4-203ENST00000480484 HDAC1Q13547 482 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-203ENST00000480484 BAG4O95429 457 aaKnown RBP12.44□□□□□ -0.42
COMMD4-203ENST00000480484 ANKRD45Q5TZF3 282 aa12.44□□□□□ -0.42
COMMD4-203ENST00000480484 HDGFL2Q7Z4V5 671 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-203ENST00000480484 PLCD4Q9BRC7 762 aa12.44□□□□□ -0.42
COMMD4-203ENST00000480484 KLHL40Q2TBA0 621 aa12.44□□□□□ -0.42
COMMD4-203ENST00000480484 JARID2Q92833 1246 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-203ENST00000480484 ZNF662Q6ZS27 426 aa12.43□□□□□ -0.42
COMMD4-203ENST00000480484 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
COMMD4-203ENST00000480484 RIPOR2Q9Y4F9 1068 aa12.43□□□□□ -0.42
COMMD4-203ENST00000480484 MARCH6O60337 910 aa12.43□□□□□ -0.42
COMMD4-203ENST00000480484 SIRT2Q8IXJ6 389 aa12.43□□□□□ -0.42
COMMD4-203ENST00000480484 KIAA1522Q9P206 1035 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-203ENST00000480484 METP08581 1390 aa12.43□□□□□ -0.42
COMMD4-203ENST00000480484 KRT24Q2M2I5 525 aa12.43□□□□□ -0.42
COMMD4-203ENST00000480484 ATF7IPQ6VMQ6 1270 aa12.43□□□□□ -0.42
COMMD4-203ENST00000480484 MAP7D2Q96T17 732 aa12.43□□□□□ -0.42
COMMD4-203ENST00000480484 ZHX1Q9UKY1 873 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-203ENST00000480484 DCTN1Q14203 1278 aa12.42□□□□□ -0.42
COMMD4-203ENST00000480484 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
COMMD4-203ENST00000480484 PHACTR3Q96KR7 559 aa12.42□□□□□ -0.42
COMMD4-203ENST00000480484 DIAPH1O60610 1272 aaKnown RBP12.42□□□□□ -0.42
COMMD4-203ENST00000480484 RBSNQ9H1K0 784 aa12.42□□□□□ -0.42
COMMD4-203ENST00000480484 ZBTB40Q9NUA8 1239 aa12.42□□□□□ -0.42
COMMD4-203ENST00000480484 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
COMMD4-203ENST00000480484 FAM83GA6ND36 823 aa12.41□□□□□ -0.42
COMMD4-203ENST00000480484 ZSCAN23Q3MJ62 389 aa12.41□□□□□ -0.42
COMMD4-203ENST00000480484 CHD1LQ86WJ1 897 aa12.41□□□□□ -0.42
COMMD4-203ENST00000480484 PPP1R1BQ9UD71 204 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-203ENST00000480484 AMOTL2Q9Y2J4 779 aa12.41□□□□□ -0.42
COMMD4-203ENST00000480484 FOXD4L6Q3SYB3 417 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-203ENST00000480484 FOXD4L3Q6VB84 417 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-203ENST00000480484 NME9Q86XW9 330 aa12.41□□□□□ -0.42
COMMD4-203ENST00000480484 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
COMMD4-203ENST00000480484 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
COMMD4-203ENST00000480484 NOL7Q9UMY1 257 aaKnown RBP12.41□□□□□ -0.42
COMMD4-203ENST00000480484 EMILIN1Q9Y6C2 1016 aa12.41□□□□□ -0.42
COMMD4-203ENST00000480484 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
COMMD4-203ENST00000480484 NUCB1Q02818 461 aa12.4□□□□□ -0.42
COMMD4-203ENST00000480484 PROSER2Q86WR7 435 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-203ENST00000480484 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
COMMD4-203ENST00000480484 KIF20BQ96Q89 1820 aa12.4□□□□□ -0.42
COMMD4-203ENST00000480484 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
COMMD4-203ENST00000480484 TECPR2O15040 1411 aa12.39□□□□□ -0.43
COMMD4-203ENST00000480484 TRIM66O15016 1216 aa12.39□□□□□ -0.43
COMMD4-203ENST00000480484 TERF1P54274 439 aa12.39□□□□□ -0.43
COMMD4-203ENST00000480484 ANAPC15P60006 121 aa12.39□□□□□ -0.43
COMMD4-203ENST00000480484 PIK3R4Q99570 1358 aa12.39□□□□□ -0.43
COMMD4-203ENST00000480484 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
COMMD4-203ENST00000480484 NSFL1CQ9UNZ2 370 aaKnown RBP12.39□□□□□ -0.43
COMMD4-203ENST00000480484 PRPF40AO75400 957 aaKnown RBP12.39□□□□□ -0.43
COMMD4-203ENST00000480484 PRKAR2BP31323 418 aa12.39□□□□□ -0.43
COMMD4-203ENST00000480484 MCM6Q14566 821 aa12.39□□□□□ -0.43
COMMD4-203ENST00000480484 RNF214Q8ND24 703 aa12.38□□□□□ -0.43
COMMD4-203ENST00000480484 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
COMMD4-203ENST00000480484 LRRC7Q96NW7 1537 aa12.38□□□□□ -0.43
COMMD4-203ENST00000480484 DNTTIP2Q5QJE6 756 aaKnown RBP12.38□□□□□ -0.43
COMMD4-203ENST00000480484 FAM43BQ6ZT52 329 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-203ENST00000480484 ZGPATQ8N5A5 531 aaKnown RBP12.38□□□□□ -0.43
COMMD4-203ENST00000480484 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-203ENST00000480484 PNPLA6Q8IY17 1366 aa12.38□□□□□ -0.43
COMMD4-203ENST00000480484 CRYBG1Q9Y4K1 1723 aa12.38□□□□□ -0.43
COMMD4-203ENST00000480484 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
COMMD4-203ENST00000480484 ZNF500O60304 480 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-203ENST00000480484 PTMAP06454 111 aaKnown RBP12.37□□□□□ -0.43
COMMD4-203ENST00000480484 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
COMMD4-203ENST00000480484 FOSBP53539 338 aa12.37□□□□□ -0.43
COMMD4-203ENST00000480484 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
COMMD4-203ENST00000480484 KRI1Q8N9T8 703 aaKnown RBP12.37□□□□□ -0.43
COMMD4-203ENST00000480484 NHSL1Q5SYE7 1610 aa12.37□□□□□ -0.43
COMMD4-203ENST00000480484 PPIP5K1Q6PFW1 1433 aa12.37□□□□□ -0.43
COMMD4-203ENST00000480484 WASLO00401 505 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-203ENST00000480484 ZNF445P59923 1031 aa12.37□□□□□ -0.43
COMMD4-203ENST00000480484 ZKSCAN5Q9Y2L8 839 aa12.37□□□□□ -0.43
COMMD4-203ENST00000480484 RRS1Q15050 365 aaKnown RBP12.37□□□□□ -0.43
COMMD4-203ENST00000480484 ANKRD13AQ8IZ07 590 aa12.37□□□□□ -0.43
COMMD4-203ENST00000480484 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-203ENST00000480484 ESF1Q9H501 851 aaKnown RBP12.36□□□□□ -0.43
COMMD4-203ENST00000480484 DYNC1I1O14576 645 aa12.36□□□□□ -0.43
COMMD4-203ENST00000480484 CSPP1Q1MSJ5 1256 aa12.36□□□□□ -0.43
COMMD4-203ENST00000480484 HS1BP3Q53T59 392 aa12.36□□□□□ -0.43
COMMD4-203ENST00000480484 LMBRD1Q9NUN5 540 aa12.36□□□□□ -0.43
COMMD4-203ENST00000480484 KIF16BQ96L93 1317 aa12.36□□□□□ -0.43
COMMD4-203ENST00000480484 FMN2Q9NZ56 1722 aa12.35□□□□□ -0.43
COMMD4-203ENST00000480484 SYCE3A1L190 88 aa12.35□□□□□ -0.43
COMMD4-203ENST00000480484 ANKRD62A6NC57 917 aa12.35□□□□□ -0.43
COMMD4-203ENST00000480484 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
COMMD4-203ENST00000480484 TNRQ92752 1358 aa12.35□□□□□ -0.43
COMMD4-203ENST00000480484 ITSN1Q15811 1721 aa12.35□□□□□ -0.43
COMMD4-203ENST00000480484 SMAP1Q8IYB5 467 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms