RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 POLKQ9UBT6 870 aa12.26□□□□□ -0.45
VCP-206ENST00000480327 CD2APQ9Y5K6 639 aa12.26□□□□□ -0.45
VCP-206ENST00000480327 ATP10DQ9P241 1426 aa12.26□□□□□ -0.45
VCP-206ENST00000480327 CICQ96RK0 1608 aaPredicted RBP12.26□□□□□ -0.45
VCP-206ENST00000480327 GRIN3BO60391 1043 aa12.25□□□□□ -0.45
VCP-206ENST00000480327 GIGYF1O75420 1035 aaPredicted RBP12.25□□□□□ -0.45
VCP-206ENST00000480327 ASAP1Q9ULH1 1129 aa12.25□□□□□ -0.45
VCP-206ENST00000480327 NPC1L1Q9UHC9 1359 aa12.25□□□□□ -0.45
VCP-206ENST00000480327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
VCP-206ENST00000480327 LOC102724428A0A0B4J2F2 783 aa12.24□□□□□ -0.45
VCP-206ENST00000480327 PHF14O94880 888 aa12.24□□□□□ -0.45
VCP-206ENST00000480327 PHKG2P15735 406 aa12.24□□□□□ -0.45
VCP-206ENST00000480327 KDRP35968 1356 aa12.24□□□□□ -0.45
VCP-206ENST00000480327 SIK1P57059 783 aa12.24□□□□□ -0.45
VCP-206ENST00000480327 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
VCP-206ENST00000480327 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
VCP-206ENST00000480327 TJP1Q07157 1748 aa12.23□□□□□ -0.45
VCP-206ENST00000480327 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
VCP-206ENST00000480327 AK7Q96M32 723 aa12.23□□□□□ -0.45
VCP-206ENST00000480327 SLC4A9Q96Q91 983 aa12.23□□□□□ -0.45
VCP-206ENST00000480327 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
VCP-206ENST00000480327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.456e-6■□□□□ 8.9
VCP-206ENST00000480327 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
VCP-206ENST00000480327 IGSF1Q8N6C5 1336 aa12.22□□□□□ -0.45
VCP-206ENST00000480327 SSFA2P28290 1259 aa12.22□□□□□ -0.45
VCP-206ENST00000480327 MTHFSP49914 203 aa12.22□□□□□ -0.45
VCP-206ENST00000480327 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
VCP-206ENST00000480327 SPG7Q9UQ90 795 aa12.22□□□□□ -0.45
VCP-206ENST00000480327 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
VCP-206ENST00000480327 KDM6AO15550 1401 aaPredicted RBP12.21□□□□□ -0.45
VCP-206ENST00000480327 TMOD3Q9NYL9 352 aa12.21□□□□□ -0.45
VCP-206ENST00000480327 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
VCP-206ENST00000480327 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
VCP-206ENST00000480327 IFNL2Q8IZJ0 200 aa12.2□□□□□ -0.46
VCP-206ENST00000480327 ARFGEF1Q9Y6D6 1849 aa12.2□□□□□ -0.46
VCP-206ENST00000480327 GNPATO15228 680 aa12.19□□□□□ -0.46
VCP-206ENST00000480327 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
VCP-206ENST00000480327 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
VCP-206ENST00000480327 RALBP1Q15311 655 aa12.18□□□□□ -0.46
VCP-206ENST00000480327 MMP10P09238 476 aa12.17□□□□□ -0.46
VCP-206ENST00000480327 PRKRIP1Q9H875 184 aaPredicted RBP12.17□□□□□ -0.46
VCP-206ENST00000480327 C10orf71Q711Q0 1435 aa12.17□□□□□ -0.46
VCP-206ENST00000480327 SBF1O95248 1867 aa12.17□□□□□ -0.46
VCP-206ENST00000480327 ANP32CO43423 234 aa12.16□□□□□ -0.46
VCP-206ENST00000480327 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
VCP-206ENST00000480327 AEBP1Q8IUX7 1158 aa12.16□□□□□ -0.46
VCP-206ENST00000480327 ZNF526Q8TF50 670 aaPredicted RBP12.16□□□□□ -0.46
VCP-206ENST00000480327 AFDNP55196 1824 aaKnown RBP12.16□□□□□ -0.46
VCP-206ENST00000480327 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
VCP-206ENST00000480327 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
VCP-206ENST00000480327 GPBP1L1Q9HC44 474 aaPredicted RBP12.15□□□□□ -0.46
VCP-206ENST00000480327 MYBBP1AQ9BQG0 1328 aaKnown RBP12.14□□□□□ -0.47
VCP-206ENST00000480327 KIF3CO14782 793 aa12.14□□□□□ -0.47
VCP-206ENST00000480327 GYS1P13807 737 aa12.14□□□□□ -0.47
VCP-206ENST00000480327 CFAP53Q96M91 514 aa12.14□□□□□ -0.47
VCP-206ENST00000480327 CNTNAP4Q9C0A0 1308 aa12.13□□□□□ -0.47
VCP-206ENST00000480327 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
VCP-206ENST00000480327 DIAPH1O60610 1272 aaKnown RBP12.13□□□□□ -0.47
VCP-206ENST00000480327 IL13P35225 146 aa12.13□□□□□ -0.47
VCP-206ENST00000480327 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
VCP-206ENST00000480327 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
VCP-206ENST00000480327 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
VCP-206ENST00000480327 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
VCP-206ENST00000480327 A0A0G2JLW4 131 aa12.12□□□□□ -0.47
VCP-206ENST00000480327 KCNA3P22001 575 aa12.12□□□□□ -0.47
VCP-206ENST00000480327 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
VCP-206ENST00000480327 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
VCP-206ENST00000480327 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
VCP-206ENST00000480327 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
VCP-206ENST00000480327 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
VCP-206ENST00000480327 DLEC1Q9Y238 1755 aa12.12□□□□□ -0.47
VCP-206ENST00000480327 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
VCP-206ENST00000480327 CCDC88AQ3V6T2 1871 aa12.11□□□□□ -0.47
VCP-206ENST00000480327 RPS6KA4O75676 772 aa12.11□□□□□ -0.47
VCP-206ENST00000480327 HMOX1P09601 288 aa12.11□□□□□ -0.47
VCP-206ENST00000480327 DPEP1P16444 411 aa12.11□□□□□ -0.47
VCP-206ENST00000480327 HSPA6P17066 643 aa12.11□□□□□ -0.47
VCP-206ENST00000480327 PLEKHO1Q53GL0 409 aaPredicted RBP12.11□□□□□ -0.47
VCP-206ENST00000480327 MRC1P22897 1456 aa12.1□□□□□ -0.47
VCP-206ENST00000480327 ADRA2BP18089 450 aa12.1□□□□□ -0.47
VCP-206ENST00000480327 TGFB2P61812 414 aa12.1□□□□□ -0.47
VCP-206ENST00000480327 SULT6B1Q6IMI4 303 aa12.1□□□□□ -0.47
VCP-206ENST00000480327 NLGN1Q8N2Q7 840 aa12.1□□□□□ -0.47
VCP-206ENST00000480327 SRP68Q9UHB9 627 aaKnown RBP12.1□□□□□ -0.47
VCP-206ENST00000480327 KCPQ6ZWJ8 1503 aa12.1□□□□□ -0.47
VCP-206ENST00000480327 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
VCP-206ENST00000480327 WDR90Q96KV7 1748 aa12.09□□□□□ -0.47
VCP-206ENST00000480327 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
VCP-206ENST00000480327 HSP90AB1P08238 724 aaKnown RBP12.09□□□□□ -0.47
VCP-206ENST00000480327 CRKLP46109 303 aaKnown RBP12.09□□□□□ -0.47
VCP-206ENST00000480327 CABP4P57796 275 aa12.09□□□□□ -0.47
VCP-206ENST00000480327 DDR1Q08345 913 aa12.09□□□□□ -0.47
VCP-206ENST00000480327 AMOTQ4VCS5 1084 aa12.09□□□□□ -0.47
VCP-206ENST00000480327 CCDC184Q52MB2 194 aa12.09□□□□□ -0.47
VCP-206ENST00000480327 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
VCP-206ENST00000480327 BCS1LQ9Y276 419 aa12.09□□□□□ -0.47
VCP-206ENST00000480327 U2AF1L5P0DN76 240 aaPredicted RBP12.08□□□□□ -0.48
VCP-206ENST00000480327 U2AF1Q01081 240 aaKnown RBP eCLIP12.08□□□□□ -0.483e-6■■□□□ 12.5
VCP-206ENST00000480327 FKBP8Q14318 412 aa12.08□□□□□ -0.48
VCP-206ENST00000480327 IFFO2Q5TF58 517 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms