RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CCDC146Q8IYE0 955 aa14.3□□□□□ -0.12
ATG4B-219ENST00000479941 ATG3Q9NT62 314 aa14.3□□□□□ -0.12
ATG4B-219ENST00000479941 ASAP1Q9ULH1 1129 aa14.3□□□□□ -0.12
ATG4B-219ENST00000479941 CEMIPQ8WUJ3 1361 aa14.3□□□□□ -0.12
ATG4B-219ENST00000479941 MRC1P22897 1456 aa14.3□□□□□ -0.12
ATG4B-219ENST00000479941 CCNL1Q9UK58 526 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-219ENST00000479941 LY75O60449 1722 aa14.28□□□□□ -0.12
ATG4B-219ENST00000479941 TMPOP42166 694 aaKnown RBP14.28□□□□□ -0.12
ATG4B-219ENST00000479941 RIPK4P57078 832 aa14.28□□□□□ -0.12
ATG4B-219ENST00000479941 MCM10Q7L590 875 aa14.28□□□□□ -0.12
ATG4B-219ENST00000479941 LRRC4BQ9NT99 713 aa14.28□□□□□ -0.12
ATG4B-219ENST00000479941 NUP188Q5SRE5 1749 aa14.27□□□□□ -0.12
ATG4B-219ENST00000479941 LMOD3Q0VAK6 560 aa14.27□□□□□ -0.13
ATG4B-219ENST00000479941 LOC102724428A0A0B4J2F2 783 aa14.26□□□□□ -0.13
ATG4B-219ENST00000479941 CCER2I3L3R5 266 aa14.26□□□□□ -0.13
ATG4B-219ENST00000479941 SIK1P57059 783 aa14.26□□□□□ -0.13
ATG4B-219ENST00000479941 DCTN1Q14203 1278 aa14.26□□□□□ -0.13
ATG4B-219ENST00000479941 STK32BQ9NY57 414 aa14.26□□□□□ -0.13
ATG4B-219ENST00000479941 VIRMAQ69YN4 1812 aaKnown RBP14.26□□□□□ -0.13
ATG4B-219ENST00000479941 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
ATG4B-219ENST00000479941 BTBD11A6QL63 1104 aa14.24□□□□□ -0.13
ATG4B-219ENST00000479941 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
ATG4B-219ENST00000479941 KCNQ4P56696 695 aa14.24□□□□□ -0.13
ATG4B-219ENST00000479941 SLC39A6Q13433 755 aa14.24□□□□□ -0.13
ATG4B-219ENST00000479941 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
ATG4B-219ENST00000479941 SLC15A2Q16348 729 aa14.24□□□□□ -0.13
ATG4B-219ENST00000479941 TTC5Q8N0Z6 440 aa14.24□□□□□ -0.13
ATG4B-219ENST00000479941 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-219ENST00000479941 RRP7AQ9Y3A4 280 aaKnown RBP14.24□□□□□ -0.13
ATG4B-219ENST00000479941 DLG5Q8TDM6 1919 aa14.23□□□□□ -0.13
ATG4B-219ENST00000479941 APAF1O14727 1248 aa14.23□□□□□ -0.13
ATG4B-219ENST00000479941 PTCD1O75127 700 aaKnown RBP14.23□□□□□ -0.13
ATG4B-219ENST00000479941 R3HDM1Q15032 1099 aaKnown RBP14.23□□□□□ -0.13
ATG4B-219ENST00000479941 TAF7Q15545 349 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-219ENST00000479941 ZNF790Q6PG37 636 aa14.23□□□□□ -0.13
ATG4B-219ENST00000479941 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
ATG4B-219ENST00000479941 PAPPAQ13219 1627 aa14.23□□□□□ -0.13
ATG4B-219ENST00000479941 SRCAPQ6ZRS2 3230 aa14.22□□□□□ -0.13
ATG4B-219ENST00000479941 AKT1S1Q96B36 256 aa14.22□□□□□ -0.13
ATG4B-219ENST00000479941 SLC4A9Q96Q91 983 aa14.22□□□□□ -0.13
ATG4B-219ENST00000479941 SIPA1L3O60292 1781 aaPredicted RBP14.22□□□□□ -0.13
ATG4B-219ENST00000479941 ZNF831Q5JPB2 1677 aa14.21□□□□□ -0.13
ATG4B-219ENST00000479941 PSDA5PKW4 1024 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-219ENST00000479941 ITPK1Q13572 414 aa14.21□□□□□ -0.13
ATG4B-219ENST00000479941 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
ATG4B-219ENST00000479941 THUMPD2Q9BTF0 503 aaKnown RBP14.21□□□□□ -0.13
ATG4B-219ENST00000479941 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
ATG4B-219ENST00000479941 ZNF827Q17R98 1081 aa14.2□□□□□ -0.14
ATG4B-219ENST00000479941 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
ATG4B-219ENST00000479941 MIER1Q8N108 512 aa14.19□□□□□ -0.14
ATG4B-219ENST00000479941 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
ATG4B-219ENST00000479941 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
ATG4B-219ENST00000479941 AK7Q96M32 723 aa14.19□□□□□ -0.14
ATG4B-219ENST00000479941 FMNL2Q96PY5 1086 aa14.19□□□□□ -0.14
ATG4B-219ENST00000479941 BABAM1Q9NWV8 329 aa14.19□□□□□ -0.14
ATG4B-219ENST00000479941 TFCP2L1Q9NZI6 479 aa14.19□□□□□ -0.14
ATG4B-219ENST00000479941 C5P01031 1676 aa14.19□□□□□ -0.14
ATG4B-219ENST00000479941 KCPQ6ZWJ8 1503 aa14.19□□□□□ -0.14
ATG4B-219ENST00000479941 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
ATG4B-219ENST00000479941 CCDC27Q2M243 656 aa14.18□□□□□ -0.14
ATG4B-219ENST00000479941 RC3H1Q5TC82 1133 aaKnown RBP14.18□□□□□ -0.14
ATG4B-219ENST00000479941 TEX13AQ9BXU3 409 aaPredicted RBP14.18□□□□□ -0.14
ATG4B-219ENST00000479941 HEG1Q9ULI3 1381 aa14.18□□□□□ -0.14
ATG4B-219ENST00000479941 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
ATG4B-219ENST00000479941 CICQ96RK0 1608 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-219ENST00000479941 KCNQ3O43525 872 aa14.17□□□□□ -0.14
ATG4B-219ENST00000479941 CALD1Q05682 793 aaKnown RBP14.17□□□□□ -0.14
ATG4B-219ENST00000479941 FLAD1Q8NFF5 587 aa14.17□□□□□ -0.14
ATG4B-219ENST00000479941 MIS18AQ9NYP9 233 aa14.17□□□□□ -0.14
ATG4B-219ENST00000479941 C4BP0C0L5 1744 aa14.17□□□□□ -0.14
ATG4B-219ENST00000479941 CNTNAP4Q9C0A0 1308 aa14.16□□□□□ -0.14
ATG4B-219ENST00000479941 DNAJC10Q8IXB1 793 aa14.16□□□□□ -0.14
ATG4B-219ENST00000479941 NGEFQ8N5V2 710 aa14.16□□□□□ -0.14
ATG4B-219ENST00000479941 TSPYL4Q9UJ04 414 aa14.16□□□□□ -0.14
ATG4B-219ENST00000479941 PNPLA7Q6ZV29 1317 aa14.15□□□□□ -0.14
ATG4B-219ENST00000479941 STARD3NLO95772 234 aa14.15□□□□□ -0.14
ATG4B-219ENST00000479941 SNRPA1P09661 255 aaKnown RBP14.15□□□□□ -0.14
ATG4B-219ENST00000479941 CHL1O00533 1208 aa14.14□□□□□ -0.15
ATG4B-219ENST00000479941 GNPATO15228 680 aa14.14□□□□□ -0.15
ATG4B-219ENST00000479941 CYP19A1P11511 503 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-219ENST00000479941 SSFA2P28290 1259 aa14.14□□□□□ -0.15
ATG4B-219ENST00000479941 CRKLP46109 303 aaKnown RBP14.14□□□□□ -0.15
ATG4B-219ENST00000479941 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
ATG4B-219ENST00000479941 CFAP44Q96MT7 982 aa14.14□□□□□ -0.15
ATG4B-219ENST00000479941 RTCBQ9Y3I0 505 aaKnown RBP14.14□□□□□ -0.15
ATG4B-219ENST00000479941 COL5A3P25940 1745 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-219ENST00000479941 TJP1Q07157 1748 aa14.14□□□□□ -0.15
ATG4B-219ENST00000479941 QSER1Q2KHR3 1735 aa14.13□□□□□ -0.15
ATG4B-219ENST00000479941 RPS6KA4O75676 772 aa14.13□□□□□ -0.15
ATG4B-219ENST00000479941 GNAI1P63096 354 aa14.13□□□□□ -0.15
ATG4B-219ENST00000479941 WWC1Q8IX03 1113 aa14.13□□□□□ -0.15
ATG4B-219ENST00000479941 SLC16A10Q8TF71 515 aa14.13□□□□□ -0.15
ATG4B-219ENST00000479941 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
ATG4B-219ENST00000479941 LAS1LQ9Y4W2 734 aaKnown RBP14.13□□□□□ -0.15
ATG4B-219ENST00000479941 KDM3BQ7LBC6 1761 aa14.13□□□□□ -0.15
ATG4B-219ENST00000479941 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
ATG4B-219ENST00000479941 ZNF853P0CG23 659 aa14.12□□□□□ -0.15
ATG4B-219ENST00000479941 ADRA2BP18089 450 aa14.12□□□□□ -0.15
ATG4B-219ENST00000479941 TRAPPC3LQ5T215 181 aa14.12□□□□□ -0.15
ATG4B-219ENST00000479941 COL23A1Q86Y22 540 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms