RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
COL16A1-211ENST00000479100 TMOD3Q9NYL9 352 aa20.11■□□□□ 0.81
COL16A1-211ENST00000479100 ATF5Q9Y2D1 282 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-211ENST00000479100 KDM6AO15550 1401 aaPredicted RBP20.1■□□□□ 0.81
COL16A1-211ENST00000479100 ERVV-2B6SEH9 535 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 RNMTO43148 476 aaKnown RBP20.1■□□□□ 0.81
COL16A1-211ENST00000479100 CABP4P57796 275 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 MTFR1LQ9H019 292 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 RTF1Q92541 710 aaKnown RBP20.09■□□□□ 0.81
COL16A1-211ENST00000479100 BTAF1O14981 1849 aa20.09■□□□□ 0.81
COL16A1-211ENST00000479100 PIGBQ92521 554 aa20.08■□□□□ 0.81
COL16A1-211ENST00000479100 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
COL16A1-211ENST00000479100 CCER2I3L3R5 266 aa20.07■□□□□ 0.8
COL16A1-211ENST00000479100 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
COL16A1-211ENST00000479100 RRP7AQ9Y3A4 280 aaKnown RBP20.07■□□□□ 0.8
COL16A1-211ENST00000479100 NFATC2IPQ8NCF5 419 aa20.06■□□□□ 0.8
COL16A1-211ENST00000479100 TMPOP42166 694 aaKnown RBP20.05■□□□□ 0.8
COL16A1-211ENST00000479100 KCNQ4P56696 695 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 RIPK4P57078 832 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 TEFQ10587 303 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 DCTN1Q14203 1278 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 MCM10Q7L590 875 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 ITGB4P16144 1822 aa20.04■□□□□ 0.8
COL16A1-211ENST00000479100 SENP3-EIF4A1A0A087X0R7 540 aa20.03■□□□□ 0.8
COL16A1-211ENST00000479100 SYT17Q9BSW7 474 aa20.03■□□□□ 0.8
COL16A1-211ENST00000479100 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
COL16A1-211ENST00000479100 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.8
COL16A1-211ENST00000479100 APAF1O14727 1248 aa20.02■□□□□ 0.8
COL16A1-211ENST00000479100 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
COL16A1-211ENST00000479100 SMARCC1Q92922 1105 aaPredicted RBP20.02■□□□□ 0.8
COL16A1-211ENST00000479100 FHDC1Q9C0D6 1143 aaPredicted RBP20.02■□□□□ 0.8
COL16A1-211ENST00000479100 ASAP1Q9ULH1 1129 aa20.02■□□□□ 0.8
COL16A1-211ENST00000479100 SCN11AQ9UI33 1791 aa20.01■□□□□ 0.79
COL16A1-211ENST00000479100 PALLDQ8WX93 1383 aa20■□□□□ 0.79
COL16A1-211ENST00000479100 SLC16A10Q8TF71 515 aa20■□□□□ 0.79
COL16A1-211ENST00000479100 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
COL16A1-211ENST00000479100 ATG3Q9NT62 314 aa20■□□□□ 0.79
COL16A1-211ENST00000479100 CCNL1Q9UK58 526 aaPredicted RBP20■□□□□ 0.79
COL16A1-211ENST00000479100 LMOD3Q0VAK6 560 aa19.99■□□□□ 0.79
COL16A1-211ENST00000479100 ARXQ96QS3 562 aa19.99■□□□□ 0.79
COL16A1-211ENST00000479100 CEMIPQ8WUJ3 1361 aa19.98■□□□□ 0.79
COL16A1-211ENST00000479100 SLC39A6Q13433 755 aa19.98■□□□□ 0.79
COL16A1-211ENST00000479100 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
COL16A1-211ENST00000479100 TFCP2L1Q9NZI6 479 aa19.98■□□□□ 0.79
COL16A1-211ENST00000479100 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
COL16A1-211ENST00000479100 ADAMTS7Q9UKP4 1686 aa19.97■□□□□ 0.79
COL16A1-211ENST00000479100 BTBD11A6QL63 1104 aa19.96■□□□□ 0.79
COL16A1-211ENST00000479100 PTCD1O75127 700 aaKnown RBP19.96■□□□□ 0.79
COL16A1-211ENST00000479100 YY1P25490 414 aa19.96■□□□□ 0.79
COL16A1-211ENST00000479100 VIRMAQ69YN4 1812 aaKnown RBP19.96■□□□□ 0.79
COL16A1-211ENST00000479100 MRC1P22897 1456 aa19.96■□□□□ 0.79
COL16A1-211ENST00000479100 TRIM35Q9UPQ4 493 aa19.95■□□□□ 0.78
COL16A1-211ENST00000479100 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
COL16A1-211ENST00000479100 LY75O60449 1722 aa19.95■□□□□ 0.78
COL16A1-211ENST00000479100 LOC102724428A0A0B4J2F2 783 aa19.94■□□□□ 0.78
COL16A1-211ENST00000479100 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
COL16A1-211ENST00000479100 SIK1P57059 783 aa19.94■□□□□ 0.78
COL16A1-211ENST00000479100 TAF7Q15545 349 aaPredicted RBP19.94■□□□□ 0.78
COL16A1-211ENST00000479100 TTC5Q8N0Z6 440 aa19.94■□□□□ 0.78
COL16A1-211ENST00000479100 COL23A1Q86Y22 540 aaPredicted RBP19.93■□□□□ 0.78
COL16A1-211ENST00000479100 MIS18AQ9NYP9 233 aa19.93■□□□□ 0.78
COL16A1-211ENST00000479100 GOLGB1Q14789 3259 aaKnown RBP19.92■□□□□ 0.78
COL16A1-211ENST00000479100 ATP6V1AP38606 617 aa19.92■□□□□ 0.78
COL16A1-211ENST00000479100 LAS1LQ9Y4W2 734 aaKnown RBP19.92■□□□□ 0.78
COL16A1-211ENST00000479100 KCNQ3O43525 872 aa19.9■□□□□ 0.78
COL16A1-211ENST00000479100 ZNF790Q6PG37 636 aa19.9■□□□□ 0.78
COL16A1-211ENST00000479100 QSER1Q2KHR3 1735 aa19.9■□□□□ 0.78
COL16A1-211ENST00000479100 POLD1P28340 1107 aa19.89■□□□□ 0.77
COL16A1-211ENST00000479100 ITPK1Q13572 414 aa19.88■□□□□ 0.77
COL16A1-211ENST00000479100 AMIGO3Q86WK7 504 aa19.88■□□□□ 0.77
COL16A1-211ENST00000479100 SLC4A9Q96Q91 983 aa19.88■□□□□ 0.77
COL16A1-211ENST00000479100 TSPYL4Q9UJ04 414 aa19.88■□□□□ 0.77
COL16A1-211ENST00000479100 SIPA1L3O60292 1781 aaPredicted RBP19.88■□□□□ 0.77
COL16A1-211ENST00000479100 HMGB2P26583 209 aaKnown RBP19.87■□□□□ 0.77
COL16A1-211ENST00000479100 ZNF496Q96IT1 587 aaPredicted RBP19.87■□□□□ 0.77
COL16A1-211ENST00000479100 FMNL2Q96PY5 1086 aa19.87■□□□□ 0.77
COL16A1-211ENST00000479100 COL24A1Q17RW2 1714 aa19.87■□□□□ 0.77
COL16A1-211ENST00000479100 CALD1Q05682 793 aaKnown RBP19.86■□□□□ 0.77
COL16A1-211ENST00000479100 LINC00116Q8NCU8 138 aa19.86■□□□□ 0.77
COL16A1-211ENST00000479100 TUBGCP6Q96RT7 1819 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 CCDC27Q2M243 656 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 WWC1Q8IX03 1113 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 DNAJC10Q8IXB1 793 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 AK7Q96M32 723 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 KCPQ6ZWJ8 1503 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 FLAD1Q8NFF5 587 aa19.83■□□□□ 0.77
COL16A1-211ENST00000479100 NLGN2Q8NFZ4 835 aa19.83■□□□□ 0.77
COL16A1-211ENST00000479100 HEG1Q9ULI3 1381 aa19.83■□□□□ 0.76
COL16A1-211ENST00000479100 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
COL16A1-211ENST00000479100 VSIG10Q8N0Z9 540 aa19.82■□□□□ 0.76
COL16A1-211ENST00000479100 BABAM1Q9NWV8 329 aa19.82■□□□□ 0.76
COL16A1-211ENST00000479100 CHL1O00533 1208 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 MSH5O43196 834 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 GNAI1P63096 354 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 MSL1Q68DK7 614 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 NGEFQ8N5V2 710 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 CFAP44Q96MT7 982 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms