RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CCT4P50991 539 aaKnown RBP13.34□□□□□ -0.27
VPS52-217ENST00000478934 PDE1AP54750 535 aa13.34□□□□□ -0.27
VPS52-217ENST00000478934 CHAMP1Q96JM3 812 aa13.34□□□□□ -0.27
VPS52-217ENST00000478934 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
VPS52-217ENST00000478934 GAS2L3Q86XJ1 694 aa13.33□□□□□ -0.28
VPS52-217ENST00000478934 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
VPS52-217ENST00000478934 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
VPS52-217ENST00000478934 CCDC30Q5VVM6 783 aa13.32□□□□□ -0.28
VPS52-217ENST00000478934 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
VPS52-217ENST00000478934 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
VPS52-217ENST00000478934 FMN2Q9NZ56 1722 aa13.32□□□□□ -0.28
VPS52-217ENST00000478934 DDX11L8A8MPP1 907 aa13.32□□□□□ -0.28
VPS52-217ENST00000478934 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
VPS52-217ENST00000478934 ZGPATQ8N5A5 531 aaKnown RBP13.32□□□□□ -0.28
VPS52-217ENST00000478934 IL1RAPL2Q9NP60 686 aa13.32□□□□□ -0.28
VPS52-217ENST00000478934 NWD1Q149M9 1564 aa13.32□□□□□ -0.28
VPS52-217ENST00000478934 HMMRO75330 724 aa13.31□□□□□ -0.28
VPS52-217ENST00000478934 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
VPS52-217ENST00000478934 USP44Q9H0E7 712 aa13.31□□□□□ -0.28
VPS52-217ENST00000478934 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
VPS52-217ENST00000478934 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
VPS52-217ENST00000478934 GRPEL1Q9HAV7 217 aa13.31□□□□□ -0.28
VPS52-217ENST00000478934 MAP4K4O95819 1239 aaPredicted RBP13.3□□□□□ -0.28
VPS52-217ENST00000478934 RABEP1Q15276 862 aa13.3□□□□□ -0.28
VPS52-217ENST00000478934 RILPL2Q969X0 211 aa13.3□□□□□ -0.28
VPS52-217ENST00000478934 ATP8B2P98198 1209 aa13.29□□□□□ -0.28
VPS52-217ENST00000478934 LMOD2Q6P5Q4 547 aa13.29□□□□□ -0.28
VPS52-217ENST00000478934 MPRIPQ6WCQ1 1025 aa13.29□□□□□ -0.28
VPS52-217ENST00000478934 PSME1Q06323 249 aa13.29□□□□□ -0.28
VPS52-217ENST00000478934 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
VPS52-217ENST00000478934 NOL8Q76FK4 1167 aaKnown RBP13.29□□□□□ -0.28
VPS52-217ENST00000478934 NUTM1Q86Y26 1132 aa13.29□□□□□ -0.28
VPS52-217ENST00000478934 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
VPS52-217ENST00000478934 GBP4Q96PP9 640 aa13.29□□□□□ -0.28
VPS52-217ENST00000478934 ORAI2Q96SN7 254 aa13.29□□□□□ -0.28
VPS52-217ENST00000478934 LRRCC1Q9C099 1032 aa13.29□□□□□ -0.28
VPS52-217ENST00000478934 IL25Q9H293 177 aa13.29□□□□□ -0.28
VPS52-217ENST00000478934 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
VPS52-217ENST00000478934 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
VPS52-217ENST00000478934 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
VPS52-217ENST00000478934 PALD1Q9ULE6 856 aa13.28□□□□□ -0.28
VPS52-217ENST00000478934 ERC2O15083 957 aa13.28□□□□□ -0.28
VPS52-217ENST00000478934 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
VPS52-217ENST00000478934 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
VPS52-217ENST00000478934 NBPF7P0C2Y1 421 aaPredicted RBP13.27□□□□□ -0.28
VPS52-217ENST00000478934 MX1P20591 662 aa13.27□□□□□ -0.28
VPS52-217ENST00000478934 MARF1Q9Y4F3 1742 aaKnown RBP13.27□□□□□ -0.28
VPS52-217ENST00000478934 PRAMEF22A3QJZ6 481 aa13.27□□□□□ -0.29
VPS52-217ENST00000478934 GNAI3P08754 354 aa13.27□□□□□ -0.29
VPS52-217ENST00000478934 CASC1Q6TDU7 716 aa13.27□□□□□ -0.29
VPS52-217ENST00000478934 IP6K1Q92551 441 aa13.27□□□□□ -0.29
VPS52-217ENST00000478934 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
VPS52-217ENST00000478934 BAG4O95429 457 aaKnown RBP13.26□□□□□ -0.29
VPS52-217ENST00000478934 NCLP19338 710 aaKnown RBP13.26□□□□□ -0.29
VPS52-217ENST00000478934 MRE11P49959 708 aa13.26□□□□□ -0.29
VPS52-217ENST00000478934 MCTP1Q6DN14 999 aa13.26□□□□□ -0.29
VPS52-217ENST00000478934 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
VPS52-217ENST00000478934 FER1L4A9Z1Z3 1794 aa13.26□□□□□ -0.29
VPS52-217ENST00000478934 UBTFL1P0CB47 393 aaPredicted RBP13.26□□□□□ -0.29
VPS52-217ENST00000478934 EIF4A1P60842 406 aaKnown RBP13.26□□□□□ -0.29
VPS52-217ENST00000478934 PPP1R42Q7Z4L9 355 aa13.26□□□□□ -0.29
VPS52-217ENST00000478934 PI4KAP2A4QPH2 592 aa13.26□□□□□ -0.29
VPS52-217ENST00000478934 PI4KAP1Q8N8J0 262 aa13.26□□□□□ -0.29
VPS52-217ENST00000478934 ANKARQ7Z5J8 1434 aa13.25□□□□□ -0.29
VPS52-217ENST00000478934 IBTKQ9P2D0 1353 aaPredicted RBP13.25□□□□□ -0.29
VPS52-217ENST00000478934 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
VPS52-217ENST00000478934 NEK4P51957 841 aa13.25□□□□□ -0.29
VPS52-217ENST00000478934 SURF6O75683 361 aaKnown RBP13.25□□□□□ -0.29
VPS52-217ENST00000478934 REC8O95072 547 aa13.25□□□□□ -0.29
VPS52-217ENST00000478934 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
VPS52-217ENST00000478934 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
VPS52-217ENST00000478934 ANO2Q9NQ90 1003 aa13.25□□□□□ -0.29
VPS52-217ENST00000478934 ZDHHC9Q9Y397 364 aa13.25□□□□□ -0.29
VPS52-217ENST00000478934 DDX49Q9Y6V7 483 aaKnown RBP13.25□□□□□ -0.29
VPS52-217ENST00000478934 CHMLP26374 656 aa13.24□□□□□ -0.29
VPS52-217ENST00000478934 PROSER3Q2NL68 480 aa13.24□□□□□ -0.29
VPS52-217ENST00000478934 ANKLE2Q86XL3 938 aa13.24□□□□□ -0.29
VPS52-217ENST00000478934 AXIN2Q9Y2T1 843 aa13.24□□□□□ -0.29
VPS52-217ENST00000478934 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
VPS52-217ENST00000478934 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
VPS52-217ENST00000478934 DTNBO60941 627 aa13.23□□□□□ -0.29
VPS52-217ENST00000478934 UPF3BQ9BZI7 483 aaKnown RBP13.23□□□□□ -0.29
VPS52-217ENST00000478934 SRCIN1Q9C0H9 1055 aa13.23□□□□□ -0.29
VPS52-217ENST00000478934 SRGAP3O43295 1099 aa13.23□□□□□ -0.29
VPS52-217ENST00000478934 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
VPS52-217ENST00000478934 ST18O60284 1047 aa13.22□□□□□ -0.29
VPS52-217ENST00000478934 CEMIPQ8WUJ3 1361 aa13.22□□□□□ -0.29
VPS52-217ENST00000478934 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
VPS52-217ENST00000478934 GCP02774 474 aa13.22□□□□□ -0.29
VPS52-217ENST00000478934 TEFQ10587 303 aa13.22□□□□□ -0.29
VPS52-217ENST00000478934 FOXD4L6Q3SYB3 417 aaPredicted RBP13.22□□□□□ -0.29
VPS52-217ENST00000478934 FOXD4L3Q6VB84 417 aaPredicted RBP13.22□□□□□ -0.29
VPS52-217ENST00000478934 SSH3Q8TE77 659 aa13.22□□□□□ -0.29
VPS52-217ENST00000478934 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
VPS52-217ENST00000478934 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
VPS52-217ENST00000478934 CAVIN1Q6NZI2 390 aaKnown RBP13.21□□□□□ -0.29
VPS52-217ENST00000478934 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
VPS52-217ENST00000478934 DDX17Q92841 729 aaKnown RBP13.21□□□□□ -0.3
VPS52-217ENST00000478934 TMX3Q96JJ7 454 aa13.21□□□□□ -0.3
VPS52-217ENST00000478934 NAP1L5Q96NT1 182 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms