RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 XAGE2Q96GT9 111 aa8.66□□□□□ -1.02
CDC42BPA-212ENST00000478573 MX2P20592 715 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 IRS1P35568 1242 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 GSK3AP49840 483 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 SEMA3FQ13275 785 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 MCM6Q14566 821 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 TLR1Q15399 786 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 WASHC4Q2M389 1173 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 PHTF2Q8N3S3 785 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 SIRT1Q96EB6 747 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 ETNK1Q9HBU6 452 aa8.65□□□□□ -1.02
CDC42BPA-212ENST00000478573 ENAMQ9NRM1 1142 aa8.64□□□□□ -1.03
CDC42BPA-212ENST00000478573 HRH3Q9Y5N1 445 aa8.64□□□□□ -1.03
CDC42BPA-212ENST00000478573 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
CDC42BPA-212ENST00000478573 C4orf17Q53FE4 359 aa8.63□□□□□ -1.03
CDC42BPA-212ENST00000478573 FHDC1Q9C0D6 1143 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-212ENST00000478573 RUBCNLQ9H714 662 aa8.63□□□□□ -1.03
CDC42BPA-212ENST00000478573 NSFL1CQ9UNZ2 370 aaKnown RBP8.63□□□□□ -1.03
CDC42BPA-212ENST00000478573 CSB-PGBD3P0DP91 1061 aa8.62□□□□□ -1.03
CDC42BPA-212ENST00000478573 PGBD3Q8N328 593 aa8.62□□□□□ -1.03
CDC42BPA-212ENST00000478573 PLPP7Q8NBV4 271 aa8.62□□□□□ -1.03
CDC42BPA-212ENST00000478573 NEDD1Q8NHV4 660 aa8.62□□□□□ -1.03
CDC42BPA-212ENST00000478573 SCARF2Q96GP6 870 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPA-212ENST00000478573 GDF10P55107 478 aa8.61□□□□□ -1.03
CDC42BPA-212ENST00000478573 RHBDD1Q8TEB9 315 aa8.61□□□□□ -1.03
CDC42BPA-212ENST00000478573 BCRP11274 1271 aa8.6□□□□□ -1.03
CDC42BPA-212ENST00000478573 PLA2G4AP47712 749 aa8.6□□□□□ -1.03
CDC42BPA-212ENST00000478573 ACDQ96AP0 544 aa8.6□□□□□ -1.03
CDC42BPA-212ENST00000478573 THBS1P07996 1170 aa8.59□□□□□ -1.03
CDC42BPA-212ENST00000478573 MSX1P28360 303 aa8.59□□□□□ -1.03
CDC42BPA-212ENST00000478573 MAP7D1Q3KQU3 841 aa8.59□□□□□ -1.03
CDC42BPA-212ENST00000478573 SERTAD1Q9UHV2 236 aa8.59□□□□□ -1.03
CDC42BPA-212ENST00000478573 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
CDC42BPA-212ENST00000478573 COG6Q9Y2V7 657 aa8.59□□□□□ -1.03
CDC42BPA-212ENST00000478573 PIK3CDO00329 1044 aa8.58□□□□□ -1.04
CDC42BPA-212ENST00000478573 SOX11P35716 441 aa8.58□□□□□ -1.04
CDC42BPA-212ENST00000478573 SCNN1DP51172 638 aa8.58□□□□□ -1.04
CDC42BPA-212ENST00000478573 EFHC2Q5JST6 749 aa8.58□□□□□ -1.04
CDC42BPA-212ENST00000478573 PPARGC1BQ86YN6 1023 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-212ENST00000478573 PHF24Q9UPV7 400 aa8.58□□□□□ -1.04
CDC42BPA-212ENST00000478573 INHAP05111 366 aa8.57□□□□□ -1.04
CDC42BPA-212ENST00000478573 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
CDC42BPA-212ENST00000478573 TBC1D9Q6ZT07 1266 aa8.57□□□□□ -1.04
CDC42BPA-212ENST00000478573 AIDAQ96BJ3 306 aa8.57□□□□□ -1.04
CDC42BPA-212ENST00000478573 MAP2K3P46734 347 aa8.56□□□□□ -1.04
CDC42BPA-212ENST00000478573 PODNQ7Z5L7 613 aa8.56□□□□□ -1.04
CDC42BPA-212ENST00000478573 WWC1Q8IX03 1113 aa8.56□□□□□ -1.04
CDC42BPA-212ENST00000478573 ABHD17AQ96GS6 310 aa8.56□□□□□ -1.04
CDC42BPA-212ENST00000478573 CFHR5Q9BXR6 569 aa8.56□□□□□ -1.04
CDC42BPA-212ENST00000478573 OXCT2Q9BYC2 517 aaPredicted RBP8.56□□□□□ -1.04
CDC42BPA-212ENST00000478573 CNTNAP5Q8WYK1 1306 aa8.55□□□□□ -1.04
CDC42BPA-212ENST00000478573 SKIP12755 728 aa8.55□□□□□ -1.04
CDC42BPA-212ENST00000478573 GPAT2Q6NUI2 795 aa8.55□□□□□ -1.04
CDC42BPA-212ENST00000478573 POM121Q96HA1 1249 aa8.55□□□□□ -1.04
CDC42BPA-212ENST00000478573 SMTNP53814 917 aa8.54□□□□□ -1.04
CDC42BPA-212ENST00000478573 LBRQ14739 615 aaKnown RBP8.54□□□□□ -1.04
CDC42BPA-212ENST00000478573 EML3Q32P44 896 aa8.54□□□□□ -1.04
CDC42BPA-212ENST00000478573 NIFKQ9BYG3 293 aaKnown RBP8.54□□□□□ -1.04
CDC42BPA-212ENST00000478573 DNMT3AQ9Y6K1 912 aaPredicted RBP8.54□□□□□ -1.04
CDC42BPA-212ENST00000478573 PHF20L1A8MW92 1017 aa8.53□□□□□ -1.04
CDC42BPA-212ENST00000478573 RAD21O60216 631 aa8.53□□□□□ -1.04
CDC42BPA-212ENST00000478573 PSME1Q06323 249 aa8.53□□□□□ -1.04
CDC42BPA-212ENST00000478573 KLRG1Q96E93 195 aa8.53□□□□□ -1.04
CDC42BPA-212ENST00000478573 ATXN7L1Q9ULK2 861 aaPredicted RBP8.53□□□□□ -1.04
CDC42BPA-212ENST00000478573 TMEM229AB2RXF0 380 aa8.52□□□□□ -1.05
CDC42BPA-212ENST00000478573 OIP5O43482 229 aa8.52□□□□□ -1.05
CDC42BPA-212ENST00000478573 BMP4P12644 408 aa8.52□□□□□ -1.05
CDC42BPA-212ENST00000478573 FGFR3P22607 806 aa8.52□□□□□ -1.05
CDC42BPA-212ENST00000478573 UBAP2LQ14157 1087 aaKnown RBP8.52□□□□□ -1.05
CDC42BPA-212ENST00000478573 BEND7Q8N7W2 519 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-212ENST00000478573 CRISPLD1Q9H336 500 aa8.52□□□□□ -1.05
CDC42BPA-212ENST00000478573 BNIP3LO60238 219 aa8.51□□□□□ -1.05
CDC42BPA-212ENST00000478573 NBPF1Q3BBV0 1214 aa8.51□□□□□ -1.05
CDC42BPA-212ENST00000478573 ARSJQ5FYB0 599 aaPredicted RBP8.51□□□□□ -1.05
CDC42BPA-212ENST00000478573 DEPDC4Q8N2C3 294 aa8.51□□□□□ -1.05
CDC42BPA-212ENST00000478573 GALNT6Q8NCL4 622 aa8.51□□□□□ -1.05
CDC42BPA-212ENST00000478573 RRAGCQ9HB90 399 aa8.51□□□□□ -1.05
CDC42BPA-212ENST00000478573 CABP1Q9NZU7 370 aa8.51□□□□□ -1.05
CDC42BPA-212ENST00000478573 NOD1Q9Y239 953 aa8.51□□□□□ -1.05
CDC42BPA-212ENST00000478573 UBTFP17480 764 aaKnown RBP8.5□□□□□ -1.05
CDC42BPA-212ENST00000478573 ATP4AP20648 1035 aa8.5□□□□□ -1.05
CDC42BPA-212ENST00000478573 GTF2IP78347 998 aa8.5□□□□□ -1.05
CDC42BPA-212ENST00000478573 NCOA4Q13772 614 aa8.5□□□□□ -1.05
CDC42BPA-212ENST00000478573 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
CDC42BPA-212ENST00000478573 A6NJY4 79 aa8.49□□□□□ -1.05
CDC42BPA-212ENST00000478573 SHISA8B8ZZ34 492 aa8.49□□□□□ -1.05
CDC42BPA-212ENST00000478573 CTBSQ01459 385 aa8.49□□□□□ -1.05
CDC42BPA-212ENST00000478573 FIGNL1Q6PIW4 674 aa8.49□□□□□ -1.05
CDC42BPA-212ENST00000478573 ALG2Q9H553 416 aa8.49□□□□□ -1.05
CDC42BPA-212ENST00000478573 LRRC4BQ9NT99 713 aa8.49□□□□□ -1.05
CDC42BPA-212ENST00000478573 GDF2Q9UK05 429 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPA-212ENST00000478573 PCDHGA11Q9Y5H2 935 aa8.49□□□□□ -1.05
CDC42BPA-212ENST00000478573 PARP3Q9Y6F1 533 aa8.49□□□□□ -1.05
CDC42BPA-212ENST00000478573 TATP17735 454 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPA-212ENST00000478573 AMPD1P23109 780 aa8.48□□□□□ -1.05
CDC42BPA-212ENST00000478573 C1orf229Q6ZS94 237 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPA-212ENST00000478573 GOLGA6L1Q8N7Z2 621 aa8.48□□□□□ -1.05
CDC42BPA-212ENST00000478573 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDC42BPA-212ENST00000478573 C1orf216Q8TAB5 229 aa8.48□□□□□ -1.05
CDC42BPA-212ENST00000478573 ZCCHC2Q9C0B9 1178 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms