RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 NKX1-1Q15270 411 aaPredicted RBP17.26■□□□□ 0.35
LMNA-214ENST00000478063 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
LMNA-214ENST00000478063 ZNF772Q68DY9 489 aaPredicted RBP17.25■□□□□ 0.35
LMNA-214ENST00000478063 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
LMNA-214ENST00000478063 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
LMNA-214ENST00000478063 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
LMNA-214ENST00000478063 SBF2Q86WG5 1849 aa17.24■□□□□ 0.35
LMNA-214ENST00000478063 SLC52A2Q9HAB3 445 aa17.24■□□□□ 0.35
LMNA-214ENST00000478063 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
LMNA-214ENST00000478063 BTBD11A6QL63 1104 aa17.23■□□□□ 0.35
LMNA-214ENST00000478063 CABP4P57796 275 aa17.23■□□□□ 0.35
LMNA-214ENST00000478063 C5P01031 1676 aa17.23■□□□□ 0.35
LMNA-214ENST00000478063 NFATC2IPQ8NCF5 419 aa17.22■□□□□ 0.35
LMNA-214ENST00000478063 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.35
LMNA-214ENST00000478063 ERVV-2B6SEH9 535 aa17.21■□□□□ 0.35
LMNA-214ENST00000478063 MARCH10Q8NA82 808 aaPredicted RBP17.21■□□□□ 0.35
LMNA-214ENST00000478063 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
LMNA-214ENST00000478063 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
LMNA-214ENST00000478063 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
LMNA-214ENST00000478063 KRT24Q2M2I5 525 aa17.19■□□□□ 0.34
LMNA-214ENST00000478063 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
LMNA-214ENST00000478063 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
LMNA-214ENST00000478063 NHSQ6T4R5 1651 aa17.19■□□□□ 0.34
LMNA-214ENST00000478063 ONECUT3O60422 494 aaPredicted RBP17.18■□□□□ 0.34
LMNA-214ENST00000478063 SEPT12Q8IYM1 358 aa17.18■□□□□ 0.34
LMNA-214ENST00000478063 TSPYL6Q8N831 410 aa17.18■□□□□ 0.34
LMNA-214ENST00000478063 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
LMNA-214ENST00000478063 BTAF1O14981 1849 aa17.17■□□□□ 0.34
LMNA-214ENST00000478063 KCNQ3O43525 872 aa17.17■□□□□ 0.34
LMNA-214ENST00000478063 RBM6P78332 1123 aaKnown RBP17.17■□□□□ 0.34
LMNA-214ENST00000478063 EIF4A1P60842 406 aaKnown RBP17.16■□□□□ 0.34
LMNA-214ENST00000478063 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
LMNA-214ENST00000478063 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
LMNA-214ENST00000478063 SYTL4Q96C24 671 aaPredicted RBP17.16■□□□□ 0.34
LMNA-214ENST00000478063 VAMP4O75379 141 aa17.15■□□□□ 0.34
LMNA-214ENST00000478063 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
LMNA-214ENST00000478063 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
LMNA-214ENST00000478063 BCL9O00512 1426 aa17.14■□□□□ 0.33
LMNA-214ENST00000478063 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
LMNA-214ENST00000478063 ACSBG1Q96GR2 724 aa17.14■□□□□ 0.33
LMNA-214ENST00000478063 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
LMNA-214ENST00000478063 KCPQ6ZWJ8 1503 aa17.14■□□□□ 0.33
LMNA-214ENST00000478063 BCAR3O75815 825 aa17.13■□□□□ 0.33
LMNA-214ENST00000478063 RXRBP28702 533 aa17.13■□□□□ 0.33
LMNA-214ENST00000478063 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
LMNA-214ENST00000478063 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
LMNA-214ENST00000478063 PIGBQ92521 554 aa17.13■□□□□ 0.33
LMNA-214ENST00000478063 SMC4Q9NTJ3 1288 aa17.13■□□□□ 0.33
LMNA-214ENST00000478063 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
LMNA-214ENST00000478063 SOS1Q07889 1333 aaPredicted RBP17.13■□□□□ 0.33
LMNA-214ENST00000478063 NEFLP07196 543 aa17.12■□□□□ 0.33
LMNA-214ENST00000478063 ALDH1L2Q3SY69 923 aa17.12■□□□□ 0.33
LMNA-214ENST00000478063 ILDR1Q86SU0 546 aaPredicted RBP17.12■□□□□ 0.33
LMNA-214ENST00000478063 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
LMNA-214ENST00000478063 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
LMNA-214ENST00000478063 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
LMNA-214ENST00000478063 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
LMNA-214ENST00000478063 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
LMNA-214ENST00000478063 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
LMNA-214ENST00000478063 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
LMNA-214ENST00000478063 TJP1Q07157 1748 aa17.1■□□□□ 0.33
LMNA-214ENST00000478063 HOXB7P09629 217 aa17.1■□□□□ 0.33
LMNA-214ENST00000478063 CANXP27824 592 aaKnown RBP17.1■□□□□ 0.33
LMNA-214ENST00000478063 POTEAQ6S8J7 498 aa17.1■□□□□ 0.33
LMNA-214ENST00000478063 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
LMNA-214ENST00000478063 RGS12O14924 1447 aa17.1■□□□□ 0.33
LMNA-214ENST00000478063 PLIN1O60240 522 aa17.09■□□□□ 0.33
LMNA-214ENST00000478063 GIGYF1O75420 1035 aaPredicted RBP17.09■□□□□ 0.33
LMNA-214ENST00000478063 KRT27Q7Z3Y8 459 aa17.09■□□□□ 0.33
LMNA-214ENST00000478063 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
LMNA-214ENST00000478063 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
LMNA-214ENST00000478063 KIF16BQ96L93 1317 aa17.08■□□□□ 0.32
LMNA-214ENST00000478063 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
LMNA-214ENST00000478063 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
LMNA-214ENST00000478063 HDGFL1Q5TGJ6 251 aa17.08■□□□□ 0.32
LMNA-214ENST00000478063 CCDC30Q5VVM6 783 aa17.08■□□□□ 0.32
LMNA-214ENST00000478063 NECTIN2Q92692 538 aa17.08■□□□□ 0.32
LMNA-214ENST00000478063 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
LMNA-214ENST00000478063 LY75O60449 1722 aa17.07■□□□□ 0.32
LMNA-214ENST00000478063 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
LMNA-214ENST00000478063 MRPL50Q8N5N7 158 aaKnown RBP17.07■□□□□ 0.32
LMNA-214ENST00000478063 STK31Q9BXU1 1019 aa17.07■□□□□ 0.32
LMNA-214ENST00000478063 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
LMNA-214ENST00000478063 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
LMNA-214ENST00000478063 PRAMEF22A3QJZ6 481 aa17.06■□□□□ 0.32
LMNA-214ENST00000478063 KCNQ2O43526 872 aa17.06■□□□□ 0.32
LMNA-214ENST00000478063 SNRPA1P09661 255 aaKnown RBP17.06■□□□□ 0.32
LMNA-214ENST00000478063 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
LMNA-214ENST00000478063 COL5A3P25940 1745 aaPredicted RBP17.05■□□□□ 0.32
LMNA-214ENST00000478063 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
LMNA-214ENST00000478063 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
LMNA-214ENST00000478063 N4BP2Q86UW6 1770 aaPredicted RBP17.05■□□□□ 0.32
LMNA-214ENST00000478063 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
LMNA-214ENST00000478063 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
LMNA-214ENST00000478063 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
LMNA-214ENST00000478063 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
LMNA-214ENST00000478063 FKBP8Q14318 412 aa17.03■□□□□ 0.32
LMNA-214ENST00000478063 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
LMNA-214ENST00000478063 SMARCC1Q92922 1105 aaPredicted RBP17.03■□□□□ 0.32
LMNA-214ENST00000478063 PALLDQ8WX93 1383 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms