RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 SOS1Q07889 1333 aaPredicted RBP25.58■■□□□ 1.69
TMED4-204ENST00000477639 CD2BP2O95400 341 aaKnown RBP25.58■■□□□ 1.69
TMED4-204ENST00000477639 CCDC30Q5VVM6 783 aa25.58■■□□□ 1.69
TMED4-204ENST00000477639 CIZ1Q9ULV3 898 aaPredicted RBP25.58■■□□□ 1.69
TMED4-204ENST00000477639 PHF8Q9UPP1 1060 aa25.58■■□□□ 1.69
TMED4-204ENST00000477639 RBM42Q9BTD8 480 aaKnown RBP25.56■■□□□ 1.68
TMED4-204ENST00000477639 FAM208AQ9UK61 1670 aaKnown RBP25.56■■□□□ 1.68
TMED4-204ENST00000477639 MST1RQ04912 1400 aa25.56■■□□□ 1.68
TMED4-204ENST00000477639 FLIIQ13045 1269 aa25.56■■□□□ 1.68
TMED4-204ENST00000477639 LTV1Q96GA3 475 aaPredicted RBP25.56■■□□□ 1.68
TMED4-204ENST00000477639 SDSP20132 328 aa25.55■■□□□ 1.68
TMED4-204ENST00000477639 TAF7Q15545 349 aaPredicted RBP25.55■■□□□ 1.68
TMED4-204ENST00000477639 K7ELQ4 463 aaPredicted RBP25.55■■□□□ 1.68
TMED4-204ENST00000477639 GNAI2P04899 355 aa25.55■■□□□ 1.68
TMED4-204ENST00000477639 APBB1O00213 710 aa25.54■■□□□ 1.68
TMED4-204ENST00000477639 USP26Q9BXU7 913 aa25.54■■□□□ 1.68
TMED4-204ENST00000477639 IP6K1Q92551 441 aa25.53■■□□□ 1.68
TMED4-204ENST00000477639 BRINP3Q76B58 766 aa25.52■■□□□ 1.68
TMED4-204ENST00000477639 OSBPL3Q9H4L5 887 aa25.52■■□□□ 1.68
TMED4-204ENST00000477639 NFAT5O94916 1531 aa25.51■■□□□ 1.67
TMED4-204ENST00000477639 FKBP5Q13451 457 aaPredicted RBP25.51■■□□□ 1.67
TMED4-204ENST00000477639 GNAI3P08754 354 aa25.5■■□□□ 1.67
TMED4-204ENST00000477639 USHBP1Q8N6Y0 703 aa25.5■■□□□ 1.67
TMED4-204ENST00000477639 PHLPP1O60346 1717 aa25.49■■□□□ 1.67
TMED4-204ENST00000477639 TRAK2O60296 914 aa25.49■■□□□ 1.67
TMED4-204ENST00000477639 RAB3GAP1Q15042 981 aa25.49■■□□□ 1.67
TMED4-204ENST00000477639 RABEP1Q15276 862 aa25.49■■□□□ 1.67
TMED4-204ENST00000477639 LTN1O94822 1766 aa25.49■■□□□ 1.67
TMED4-204ENST00000477639 NECTIN2Q92692 538 aa25.49■■□□□ 1.67
TMED4-204ENST00000477639 TNPO1Q92973 898 aaKnown RBP25.49■■□□□ 1.67
TMED4-204ENST00000477639 C1orf167Q5SNV9 1468 aa25.49■■□□□ 1.67
TMED4-204ENST00000477639 DDX11L8A8MPP1 907 aa25.48■■□□□ 1.67
TMED4-204ENST00000477639 ATP8B2P98198 1209 aa25.48■■□□□ 1.67
TMED4-204ENST00000477639 CEMIPQ8WUJ3 1361 aa25.48■■□□□ 1.67
TMED4-204ENST00000477639 PDE1AP54750 535 aa25.47■■□□□ 1.67
TMED4-204ENST00000477639 CACNA1FO60840 1977 aa25.47■■□□□ 1.67
TMED4-204ENST00000477639 L1TD1Q5T7N2 865 aaKnown RBP25.47■■□□□ 1.67
TMED4-204ENST00000477639 CASC1Q6TDU7 716 aa25.47■■□□□ 1.67
TMED4-204ENST00000477639 SALL3Q9BXA9 1300 aa25.46■■□□□ 1.67
TMED4-204ENST00000477639 PXDNLA1KZ92 1463 aa25.46■■□□□ 1.67
TMED4-204ENST00000477639 N4BP2Q86UW6 1770 aaPredicted RBP25.46■■□□□ 1.67
TMED4-204ENST00000477639 NBPF6Q5VWK0 638 aa25.45■■□□□ 1.67
TMED4-204ENST00000477639 NBPF4Q96M43 638 aa25.45■■□□□ 1.67
TMED4-204ENST00000477639 ORAI2Q96SN7 254 aa25.45■■□□□ 1.67
TMED4-204ENST00000477639 EXOC6BQ9Y2D4 811 aa25.45■■□□□ 1.66
TMED4-204ENST00000477639 DDX17Q92841 729 aaKnown RBP25.44■■□□□ 1.66
TMED4-204ENST00000477639 MED1Q15648 1581 aaPredicted RBP25.44■■□□□ 1.66
TMED4-204ENST00000477639 PNMA6EA0A0J9YXQ4 647 aa25.44■■□□□ 1.66
TMED4-204ENST00000477639 FSD2A1L4K1 749 aa25.44■■□□□ 1.66
TMED4-204ENST00000477639 HSP90AA1P07900 732 aaKnown RBP25.44■■□□□ 1.66
TMED4-204ENST00000477639 FOXD4L1Q9NU39 408 aa25.44■■□□□ 1.66
TMED4-204ENST00000477639 PSME1Q06323 249 aa25.42■■□□□ 1.66
TMED4-204ENST00000477639 ESCO1Q5FWF5 840 aa25.42■■□□□ 1.66
TMED4-204ENST00000477639 HDGFL1Q5TGJ6 251 aa25.42■■□□□ 1.66
TMED4-204ENST00000477639 KCNH5Q8NCM2 988 aa25.42■■□□□ 1.66
TMED4-204ENST00000477639 LRRCC1Q9C099 1032 aa25.42■■□□□ 1.66
TMED4-204ENST00000477639 RTN4Q9NQC3 1192 aaKnown RBP25.42■■□□□ 1.66
TMED4-204ENST00000477639 USP44Q9H0E7 712 aa25.42■■□□□ 1.66
TMED4-204ENST00000477639 IBTKQ9P2D0 1353 aaPredicted RBP25.41■■□□□ 1.66
TMED4-204ENST00000477639 AHDC1Q5TGY3 1603 aaPredicted RBP25.41■■□□□ 1.66
TMED4-204ENST00000477639 PHRF1Q9P1Y6 1649 aaKnown RBP25.41■■□□□ 1.66
TMED4-204ENST00000477639 ERC2O15083 957 aa25.4■■□□□ 1.66
TMED4-204ENST00000477639 REC8O95072 547 aa25.4■■□□□ 1.66
TMED4-204ENST00000477639 GBP4Q96PP9 640 aa25.4■■□□□ 1.66
TMED4-204ENST00000477639 GZF1Q9H116 711 aaPredicted RBP25.4■■□□□ 1.66
TMED4-204ENST00000477639 LGR6Q9HBX8 967 aa25.4■■□□□ 1.66
TMED4-204ENST00000477639 LRRFIP2Q9Y608 721 aaKnown RBP25.4■■□□□ 1.66
TMED4-204ENST00000477639 COL16A1Q07092 1604 aaPredicted RBP25.4■■□□□ 1.66
TMED4-204ENST00000477639 EIF4A1P60842 406 aaKnown RBP25.4■■□□□ 1.66
TMED4-204ENST00000477639 PHAXQ9H814 394 aaKnown RBP25.4■■□□□ 1.66
TMED4-204ENST00000477639 GOLGA6L3A6NEY3 463 aa25.38■■□□□ 1.65
TMED4-204ENST00000477639 NHSL1Q5SYE7 1610 aa25.38■■□□□ 1.65
TMED4-204ENST00000477639 HOXB7P09629 217 aa25.37■■□□□ 1.65
TMED4-204ENST00000477639 STAP2Q9UGK3 403 aa25.37■■□□□ 1.65
TMED4-204ENST00000477639 TUBGCP6Q96RT7 1819 aa25.37■■□□□ 1.65
TMED4-204ENST00000477639 KDM3BQ7LBC6 1761 aa25.37■■□□□ 1.65
TMED4-204ENST00000477639 CLEC17AQ6ZS10 378 aa25.36■■□□□ 1.65
TMED4-204ENST00000477639 UBTFL1P0CB47 393 aaPredicted RBP25.36■■□□□ 1.65
TMED4-204ENST00000477639 MX1P20591 662 aa25.36■■□□□ 1.65
TMED4-204ENST00000477639 AKAP4Q5JQC9 854 aa25.35■■□□□ 1.65
TMED4-204ENST00000477639 SSH3Q8TE77 659 aa25.35■■□□□ 1.65
TMED4-204ENST00000477639 LMO7Q8WWI1 1683 aa25.35■■□□□ 1.65
TMED4-204ENST00000477639 SSFA2P28290 1259 aa25.35■■□□□ 1.65
TMED4-204ENST00000477639 XRCC6P12956 609 aaKnown RBP eCLIP25.34■■□□□ 1.65
TMED4-204ENST00000477639 PTMSP20962 102 aa25.34■■□□□ 1.65
TMED4-204ENST00000477639 TSHZ3Q63HK5 1081 aa25.34■■□□□ 1.65
TMED4-204ENST00000477639 LRRC59Q96AG4 307 aaKnown RBP25.34■■□□□ 1.65
TMED4-204ENST00000477639 RGPD2P0DJD1 1756 aa25.34■■□□□ 1.65
TMED4-204ENST00000477639 NCAPD2Q15021 1401 aa25.33■■□□□ 1.65
TMED4-204ENST00000477639 ZBTB7CA1YPR0 619 aa25.33■■□□□ 1.64
TMED4-204ENST00000477639 KCNQ3O43525 872 aa25.33■■□□□ 1.64
TMED4-204ENST00000477639 EIF2S2P20042 333 aaKnown RBP25.33■■□□□ 1.64
TMED4-204ENST00000477639 PLEKHO1Q53GL0 409 aaPredicted RBP25.33■■□□□ 1.64
TMED4-204ENST00000477639 ARHGEF25Q86VW2 580 aa25.33■■□□□ 1.64
TMED4-204ENST00000477639 SRCIN1Q9C0H9 1055 aa25.33■■□□□ 1.64
TMED4-204ENST00000477639 SLIT3O75094 1523 aa25.32■■□□□ 1.64
TMED4-204ENST00000477639 ZNF530Q6P9A1 599 aaPredicted RBP25.32■■□□□ 1.64
TMED4-204ENST00000477639 ESYT1Q9BSJ8 1104 aa25.32■■□□□ 1.64
TMED4-204ENST00000477639 CHMP4AQ9BY43 222 aa25.32■■□□□ 1.64
TMED4-204ENST00000477639 JCADQ9P266 1359 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms