RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 CHD4Q14839 1912 aa18.87■□□□□ 0.61
SRRT-210ENST00000477529 MAP3K5Q99683 1374 aa18.87■□□□□ 0.61
SRRT-210ENST00000477529 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
SRRT-210ENST00000477529 KIF13BQ9NQT8 1826 aa18.86■□□□□ 0.61
SRRT-210ENST00000477529 MYBBP1AQ9BQG0 1328 aaKnown RBP18.86■□□□□ 0.61
SRRT-210ENST00000477529 PRKAR2BP31323 418 aa18.86■□□□□ 0.61
SRRT-210ENST00000477529 SMARCC1Q92922 1105 aaPredicted RBP18.86■□□□□ 0.61
SRRT-210ENST00000477529 PDGFDQ9GZP0 370 aaPredicted RBP18.86■□□□□ 0.61
SRRT-210ENST00000477529 AFDNP55196 1824 aaKnown RBP18.86■□□□□ 0.61
SRRT-210ENST00000477529 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
SRRT-210ENST00000477529 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
SRRT-210ENST00000477529 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
SRRT-210ENST00000477529 ASAP1Q9ULH1 1129 aa18.85■□□□□ 0.61
SRRT-210ENST00000477529 BCORQ6W2J9 1755 aa18.84■□□□□ 0.61
SRRT-210ENST00000477529 ATG3Q9NT62 314 aa18.84■□□□□ 0.61
SRRT-210ENST00000477529 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.6
SRRT-210ENST00000477529 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.6
SRRT-210ENST00000477529 CABP4P57796 275 aa18.82■□□□□ 0.6
SRRT-210ENST00000477529 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
SRRT-210ENST00000477529 PRKRIP1Q9H875 184 aaPredicted RBP18.82■□□□□ 0.6
SRRT-210ENST00000477529 LGR6Q9HBX8 967 aa18.82■□□□□ 0.6
SRRT-210ENST00000477529 BRCA1P38398 1863 aaKnown RBP18.82■□□□□ 0.6
SRRT-210ENST00000477529 PNPLA7Q6ZV29 1317 aa18.81■□□□□ 0.6
SRRT-210ENST00000477529 LOC102724428A0A0B4J2F2 783 aa18.81■□□□□ 0.6
SRRT-210ENST00000477529 RNMTO43148 476 aaKnown RBP18.81■□□□□ 0.6
SRRT-210ENST00000477529 FCHSD2O94868 740 aa18.81■□□□□ 0.6
SRRT-210ENST00000477529 SIK1P57059 783 aa18.81■□□□□ 0.6
SRRT-210ENST00000477529 SCN7AQ01118 1682 aa18.81■□□□□ 0.6
SRRT-210ENST00000477529 NFATC2IPQ8NCF5 419 aa18.8■□□□□ 0.6
SRRT-210ENST00000477529 SLC52A2Q9HAB3 445 aa18.8■□□□□ 0.6
SRRT-210ENST00000477529 CEMIPQ8WUJ3 1361 aa18.8■□□□□ 0.6
SRRT-210ENST00000477529 NUP98P52948 1817 aa18.79■□□□□ 0.6
SRRT-210ENST00000477529 KIAA1551Q9HCM1 1747 aa18.78■□□□□ 0.6
SRRT-210ENST00000477529 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
SRRT-210ENST00000477529 ITPK1Q13572 414 aa18.78■□□□□ 0.6
SRRT-210ENST00000477529 LINC00116Q8NCU8 138 aa18.78■□□□□ 0.6
SRRT-210ENST00000477529 SLC4A9Q96Q91 983 aa18.78■□□□□ 0.6
SRRT-210ENST00000477529 N4BP2Q86UW6 1770 aaPredicted RBP18.77■□□□□ 0.6
SRRT-210ENST00000477529 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
SRRT-210ENST00000477529 ZBTB7AO95365 584 aa18.76■□□□□ 0.59
SRRT-210ENST00000477529 TFCP2L1Q9NZI6 479 aa18.76■□□□□ 0.59
SRRT-210ENST00000477529 CACNA1FO60840 1977 aa18.75■□□□□ 0.59
SRRT-210ENST00000477529 ATP6V1AP38606 617 aa18.75■□□□□ 0.59
SRRT-210ENST00000477529 IL17REQ8NFR9 667 aa18.75■□□□□ 0.59
SRRT-210ENST00000477529 PLEKHF1Q96S99 279 aa18.75■□□□□ 0.59
SRRT-210ENST00000477529 SPON1Q9HCB6 807 aa18.75■□□□□ 0.59
SRRT-210ENST00000477529 GOLGB1Q14789 3259 aaKnown RBP18.75■□□□□ 0.59
SRRT-210ENST00000477529 AMIGO3Q86WK7 504 aa18.74■□□□□ 0.59
SRRT-210ENST00000477529 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
SRRT-210ENST00000477529 HMGB2P26583 209 aaKnown RBP18.73■□□□□ 0.59
SRRT-210ENST00000477529 MTFR1LQ9H019 292 aa18.73■□□□□ 0.59
SRRT-210ENST00000477529 ANKRD36CQ5JPF3 1778 aa18.73■□□□□ 0.59
SRRT-210ENST00000477529 DLEC1Q9Y238 1755 aa18.73■□□□□ 0.59
SRRT-210ENST00000477529 PTCD1O75127 700 aaKnown RBP18.72■□□□□ 0.59
SRRT-210ENST00000477529 PTGER2P43116 358 aa18.72■□□□□ 0.59
SRRT-210ENST00000477529 SLC39A6Q13433 755 aa18.72■□□□□ 0.59
SRRT-210ENST00000477529 AK7Q96M32 723 aa18.72■□□□□ 0.59
SRRT-210ENST00000477529 SGIP1Q9BQI5 828 aa18.72■□□□□ 0.59
SRRT-210ENST00000477529 NRXN2Q9P2S2 1712 aa18.71■□□□□ 0.59
SRRT-210ENST00000477529 COL23A1Q86Y22 540 aaPredicted RBP18.71■□□□□ 0.59
SRRT-210ENST00000477529 ATF5Q9Y2D1 282 aaPredicted RBP18.71■□□□□ 0.59
SRRT-210ENST00000477529 CNTNAP4Q9C0A0 1308 aa18.71■□□□□ 0.59
SRRT-210ENST00000477529 TEFQ10587 303 aa18.7■□□□□ 0.58
SRRT-210ENST00000477529 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
SRRT-210ENST00000477529 ANKRD31Q8N7Z5 1873 aa18.69■□□□□ 0.58
SRRT-210ENST00000477529 MCM10Q7L590 875 aa18.69■□□□□ 0.58
SRRT-210ENST00000477529 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
SRRT-210ENST00000477529 ARFGEF1Q9Y6D6 1849 aa18.69■□□□□ 0.58
SRRT-210ENST00000477529 GNPATO15228 680 aa18.68■□□□□ 0.58
SRRT-210ENST00000477529 NEFMP07197 916 aa18.68■□□□□ 0.58
SRRT-210ENST00000477529 CCDC88AQ3V6T2 1871 aa18.67■□□□□ 0.58
SRRT-210ENST00000477529 HTATSF1O43719 755 aaKnown RBP18.67■□□□□ 0.58
SRRT-210ENST00000477529 SSFA2P28290 1259 aa18.67■□□□□ 0.58
SRRT-210ENST00000477529 DCTN1Q14203 1278 aa18.67■□□□□ 0.58
SRRT-210ENST00000477529 NFE2L2Q16236 605 aa18.67■□□□□ 0.58
SRRT-210ENST00000477529 SMIM5Q71RC9 77 aa18.67■□□□□ 0.58
SRRT-210ENST00000477529 PNNQ9H307 717 aaKnown RBP18.67■□□□□ 0.58
SRRT-210ENST00000477529 UTRNP46939 3433 aa18.66■□□□□ 0.58
SRRT-210ENST00000477529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.66■□□□□ 0.58
SRRT-210ENST00000477529 PHF14O94880 888 aa18.66■□□□□ 0.58
SRRT-210ENST00000477529 FLAD1Q8NFF5 587 aa18.66■□□□□ 0.58
SRRT-210ENST00000477529 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
SRRT-210ENST00000477529 HEG1Q9ULI3 1381 aa18.66■□□□□ 0.58
SRRT-210ENST00000477529 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
SRRT-210ENST00000477529 RC3H1Q5TC82 1133 aaKnown RBP18.65■□□□□ 0.58
SRRT-210ENST00000477529 ZNF790Q6PG37 636 aa18.65■□□□□ 0.58
SRRT-210ENST00000477529 PPP1R1BQ9UD71 204 aaPredicted RBP18.65■□□□□ 0.58
SRRT-210ENST00000477529 MSH5O43196 834 aa18.64■□□□□ 0.57
SRRT-210ENST00000477529 CRKLP46109 303 aaKnown RBP18.64■□□□□ 0.57
SRRT-210ENST00000477529 CCDC184Q52MB2 194 aa18.64■□□□□ 0.57
SRRT-210ENST00000477529 DNAJC10Q8IXB1 793 aa18.64■□□□□ 0.57
SRRT-210ENST00000477529 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.57
SRRT-210ENST00000477529 TTC5Q8N0Z6 440 aa18.64■□□□□ 0.57
SRRT-210ENST00000477529 VSIG10Q8N0Z9 540 aa18.63■□□□□ 0.57
SRRT-210ENST00000477529 ZNF496Q96IT1 587 aaPredicted RBP18.63■□□□□ 0.57
SRRT-210ENST00000477529 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
SRRT-210ENST00000477529 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
SRRT-210ENST00000477529 BTBD11A6QL63 1104 aa18.62■□□□□ 0.57
SRRT-210ENST00000477529 RTCBQ9Y3I0 505 aaKnown RBP18.62■□□□□ 0.57
SRRT-210ENST00000477529 KCNQ3O43525 872 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms