RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 FCHSD2O94868 740 aa15.8■□□□□ 0.12
LSM2-212ENST00000477182 MMP10P09238 476 aa15.8■□□□□ 0.12
LSM2-212ENST00000477182 TERF2IPQ9NYB0 399 aa15.8■□□□□ 0.12
LSM2-212ENST00000477182 PKD1L3Q7Z443 1732 aa15.8■□□□□ 0.12
LSM2-212ENST00000477182 MAP3K19Q56UN5 1328 aa15.79■□□□□ 0.12
LSM2-212ENST00000477182 A0A0G2JLW4 131 aa15.79■□□□□ 0.12
LSM2-212ENST00000477182 TATP17735 454 aaPredicted RBP15.79■□□□□ 0.12
LSM2-212ENST00000477182 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
LSM2-212ENST00000477182 ITGB4P16144 1822 aa15.78■□□□□ 0.12
LSM2-212ENST00000477182 ARFGEF1Q9Y6D6 1849 aa15.78■□□□□ 0.12
LSM2-212ENST00000477182 RRAGCQ9HB90 399 aa15.78■□□□□ 0.12
LSM2-212ENST00000477182 NBPF6Q5VWK0 638 aa15.77■□□□□ 0.12
LSM2-212ENST00000477182 SMIM5Q71RC9 77 aa15.77■□□□□ 0.12
LSM2-212ENST00000477182 NLGN1Q8N2Q7 840 aa15.77■□□□□ 0.12
LSM2-212ENST00000477182 COG3Q96JB2 828 aa15.77■□□□□ 0.12
LSM2-212ENST00000477182 NBPF4Q96M43 638 aa15.77■□□□□ 0.12
LSM2-212ENST00000477182 PANK3Q9H999 370 aa15.77■□□□□ 0.12
LSM2-212ENST00000477182 CCDC87Q9NVE4 849 aa15.77■□□□□ 0.12
LSM2-212ENST00000477182 BRCA1P38398 1863 aaKnown RBP15.77■□□□□ 0.11
LSM2-212ENST00000477182 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.11
LSM2-212ENST00000477182 A0A1W2PP64 1363 aa15.76■□□□□ 0.11
LSM2-212ENST00000477182 RTL1A6NKG5 1358 aa15.76■□□□□ 0.11
LSM2-212ENST00000477182 GNPATO15228 680 aa15.76■□□□□ 0.11
LSM2-212ENST00000477182 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
LSM2-212ENST00000477182 DPEP1P16444 411 aa15.75■□□□□ 0.11
LSM2-212ENST00000477182 SIK1P57059 783 aa15.75■□□□□ 0.11
LSM2-212ENST00000477182 LINC00116Q8NCU8 138 aa15.75■□□□□ 0.11
LSM2-212ENST00000477182 RNF181Q9P0P0 153 aa15.75■□□□□ 0.11
LSM2-212ENST00000477182 PCDH10Q9P2E7 1040 aa15.75■□□□□ 0.11
LSM2-212ENST00000477182 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
LSM2-212ENST00000477182 KIF20BQ96Q89 1820 aa15.74■□□□□ 0.11
LSM2-212ENST00000477182 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
LSM2-212ENST00000477182 PIGBQ92521 554 aa15.73■□□□□ 0.11
LSM2-212ENST00000477182 CARD14Q9BXL6 1004 aa15.73■□□□□ 0.11
LSM2-212ENST00000477182 PIM2Q9P1W9 311 aa15.73■□□□□ 0.11
LSM2-212ENST00000477182 TRAPPC3LQ5T215 181 aa15.72■□□□□ 0.11
LSM2-212ENST00000477182 DCAF5Q96JK2 942 aa15.72■□□□□ 0.11
LSM2-212ENST00000477182 C4AP0C0L4 1744 aa15.71■□□□□ 0.11
LSM2-212ENST00000477182 ZC3H4Q9UPT8 1303 aaKnown RBP15.71■□□□□ 0.11
LSM2-212ENST00000477182 CYP27B1O15528 508 aa15.71■□□□□ 0.11
LSM2-212ENST00000477182 DALRD3Q5D0E6 543 aaKnown RBP15.71■□□□□ 0.11
LSM2-212ENST00000477182 PARP3Q9Y6F1 533 aa15.71■□□□□ 0.11
LSM2-212ENST00000477182 SBF1O95248 1867 aa15.71■□□□□ 0.11
LSM2-212ENST00000477182 VEGFAP15692 232 aaPredicted RBP15.7■□□□□ 0.1
LSM2-212ENST00000477182 ATP6V1AP38606 617 aa15.7■□□□□ 0.1
LSM2-212ENST00000477182 RTCBQ9Y3I0 505 aaKnown RBP15.7■□□□□ 0.1
LSM2-212ENST00000477182 ANKRD26Q9UPS8 1709 aa15.69■□□□□ 0.1
LSM2-212ENST00000477182 PER1O15534 1290 aaPredicted RBP15.69■□□□□ 0.1
LSM2-212ENST00000477182 ADRA2BP18089 450 aa15.69■□□□□ 0.1
LSM2-212ENST00000477182 KCNA3P22001 575 aa15.69■□□□□ 0.1
LSM2-212ENST00000477182 NKX1-1Q15270 411 aaPredicted RBP15.69■□□□□ 0.1
LSM2-212ENST00000477182 KNSTRNQ9Y448 316 aa15.69■□□□□ 0.1
LSM2-212ENST00000477182 FBLN1P23142 703 aa15.68■□□□□ 0.1
LSM2-212ENST00000477182 ITPK1Q13572 414 aa15.68■□□□□ 0.1
LSM2-212ENST00000477182 TMOD3Q9NYL9 352 aa15.68■□□□□ 0.1
LSM2-212ENST00000477182 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
LSM2-212ENST00000477182 PRDM10Q9NQV6 1147 aa15.67■□□□□ 0.1
LSM2-212ENST00000477182 RFC4P35249 363 aa15.66■□□□□ 0.1
LSM2-212ENST00000477182 CNGB1Q14028 1251 aaPredicted RBP15.66■□□□□ 0.1
LSM2-212ENST00000477182 RRS1Q15050 365 aaKnown RBP15.66■□□□□ 0.1
LSM2-212ENST00000477182 INSRP06213 1382 aa15.65■□□□□ 0.1
LSM2-212ENST00000477182 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
LSM2-212ENST00000477182 GYS1P13807 737 aa15.65■□□□□ 0.1
LSM2-212ENST00000477182 ARHGEF1Q92888 912 aaKnown RBP15.65■□□□□ 0.1
LSM2-212ENST00000477182 ASAP1Q9ULH1 1129 aa15.65■□□□□ 0.1
LSM2-212ENST00000477182 SPG7Q9UQ90 795 aa15.65■□□□□ 0.1
LSM2-212ENST00000477182 AMER1Q5JTC6 1135 aaPredicted RBP15.64■□□□□ 0.09
LSM2-212ENST00000477182 RC3H1Q5TC82 1133 aaKnown RBP15.64■□□□□ 0.09
LSM2-212ENST00000477182 KIF24Q5T7B8 1368 aa15.63■□□□□ 0.09
LSM2-212ENST00000477182 CC2D1BQ5T0F9 858 aaKnown RBP15.63■□□□□ 0.09
LSM2-212ENST00000477182 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
LSM2-212ENST00000477182 FYB1O15117 783 aa15.62■□□□□ 0.09
LSM2-212ENST00000477182 LMNB1P20700 586 aa15.62■□□□□ 0.09
LSM2-212ENST00000477182 HSP90AB2PQ58FF8 381 aa15.62■□□□□ 0.09
LSM2-212ENST00000477182 GGNBP2Q9H3C7 697 aa15.62■□□□□ 0.09
LSM2-212ENST00000477182 ZNF831Q5JPB2 1677 aa15.62■□□□□ 0.09
LSM2-212ENST00000477182 FLT4P35916 1363 aa15.62■□□□□ 0.09
LSM2-212ENST00000477182 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
LSM2-212ENST00000477182 KDM6AO15550 1401 aaPredicted RBP15.61■□□□□ 0.09
LSM2-212ENST00000477182 FOXN1O15353 648 aa15.61■□□□□ 0.09
LSM2-212ENST00000477182 RPS6KA4O75676 772 aa15.61■□□□□ 0.09
LSM2-212ENST00000477182 AIDAQ96BJ3 306 aa15.61■□□□□ 0.09
LSM2-212ENST00000477182 ATG3Q9NT62 314 aa15.61■□□□□ 0.09
LSM2-212ENST00000477182 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.61■□□□□ 0.09
LSM2-212ENST00000477182 CNTNAP4Q9C0A0 1308 aa15.61■□□□□ 0.09
LSM2-212ENST00000477182 CTCFP49711 727 aaPredicted RBP15.6■□□□□ 0.09
LSM2-212ENST00000477182 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
LSM2-212ENST00000477182 MKRN1Q9UHC7 482 aaKnown RBP15.59■□□□□ 0.09
LSM2-212ENST00000477182 KDRP35968 1356 aa15.59■□□□□ 0.09
LSM2-212ENST00000477182 COL5A3P25940 1745 aaPredicted RBP15.58■□□□□ 0.08
LSM2-212ENST00000477182 CHRNA5P30532 468 aa15.58■□□□□ 0.08
LSM2-212ENST00000477182 RASSF7Q02833 373 aa15.58■□□□□ 0.08
LSM2-212ENST00000477182 DPY19L2Q6NUT2 758 aa15.58■□□□□ 0.08
LSM2-212ENST00000477182 IFNL2Q8IZJ0 200 aa15.58■□□□□ 0.08
LSM2-212ENST00000477182 ANP32CO43423 234 aa15.57■□□□□ 0.08
LSM2-212ENST00000477182 RBM42Q9BTD8 480 aaKnown RBP15.57■□□□□ 0.08
LSM2-212ENST00000477182 NCAPD2Q15021 1401 aa15.57■□□□□ 0.08
LSM2-212ENST00000477182 PHKG2P15735 406 aa15.56■□□□□ 0.08
LSM2-212ENST00000477182 MORC1Q86VD1 984 aa15.56■□□□□ 0.08
LSM2-212ENST00000477182 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms