RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 C4BP0C0L5 1744 aa24.32■■□□□ 1.48
ABCB1-204ENST00000476862 MSL1Q68DK7 614 aa24.31■■□□□ 1.48
ABCB1-204ENST00000476862 MAP3K5Q99683 1374 aa24.3■■□□□ 1.48
ABCB1-204ENST00000476862 HMOX1P09601 288 aa24.3■■□□□ 1.48
ABCB1-204ENST00000476862 GPR162Q16538 588 aa24.3■■□□□ 1.48
ABCB1-204ENST00000476862 KDRP35968 1356 aa24.29■■□□□ 1.48
ABCB1-204ENST00000476862 NPC1L1Q9UHC9 1359 aa24.29■■□□□ 1.48
ABCB1-204ENST00000476862 SSFA2P28290 1259 aa24.29■■□□□ 1.48
ABCB1-204ENST00000476862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.28■■□□□ 1.48
ABCB1-204ENST00000476862 GNPATO15228 680 aa24.28■■□□□ 1.48
ABCB1-204ENST00000476862 AKAP4Q5JQC9 854 aa24.28■■□□□ 1.48
ABCB1-204ENST00000476862 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
ABCB1-204ENST00000476862 LINC00116Q8NCU8 138 aa24.28■■□□□ 1.48
ABCB1-204ENST00000476862 U2SURPO15042 1029 aaKnown RBP24.27■■□□□ 1.48
ABCB1-204ENST00000476862 CFAP53Q96M91 514 aa24.27■■□□□ 1.48
ABCB1-204ENST00000476862 NFATC2IPQ8NCF5 419 aa24.26■■□□□ 1.47
ABCB1-204ENST00000476862 COL24A1Q17RW2 1714 aa24.26■■□□□ 1.47
ABCB1-204ENST00000476862 ITPK1Q13572 414 aa24.25■■□□□ 1.47
ABCB1-204ENST00000476862 RTCBQ9Y3I0 505 aaKnown RBP24.25■■□□□ 1.47
ABCB1-204ENST00000476862 KDM6AO15550 1401 aaPredicted RBP24.24■■□□□ 1.47
ABCB1-204ENST00000476862 UBR3Q6ZT12 1888 aa24.24■■□□□ 1.47
ABCB1-204ENST00000476862 PTCD1O75127 700 aaKnown RBP24.23■■□□□ 1.47
ABCB1-204ENST00000476862 TRAPPC3LQ5T215 181 aa24.22■■□□□ 1.47
ABCB1-204ENST00000476862 RC3H1Q5TC82 1133 aaKnown RBP24.2■■□□□ 1.46
ABCB1-204ENST00000476862 SMIM5Q71RC9 77 aa24.2■■□□□ 1.46
ABCB1-204ENST00000476862 NUDCQ9Y266 331 aa24.2■■□□□ 1.46
ABCB1-204ENST00000476862 SCN11AQ9UI33 1791 aa24.19■■□□□ 1.46
ABCB1-204ENST00000476862 CHD4Q14839 1912 aa24.19■■□□□ 1.46
ABCB1-204ENST00000476862 SLC52A2Q9HAB3 445 aa24.18■■□□□ 1.46
ABCB1-204ENST00000476862 CD2APQ9Y5K6 639 aa24.18■■□□□ 1.46
ABCB1-204ENST00000476862 RNMTO43148 476 aaKnown RBP24.17■■□□□ 1.46
ABCB1-204ENST00000476862 RFC4P35249 363 aa24.17■■□□□ 1.46
ABCB1-204ENST00000476862 MTHFSDQ2M296 383 aaKnown RBP24.17■■□□□ 1.46
ABCB1-204ENST00000476862 NLGN2Q8NFZ4 835 aa24.17■■□□□ 1.46
ABCB1-204ENST00000476862 ZNF831Q5JPB2 1677 aa24.16■■□□□ 1.46
ABCB1-204ENST00000476862 ADRA2BP18089 450 aa24.16■■□□□ 1.46
ABCB1-204ENST00000476862 AMIGO3Q86WK7 504 aa24.16■■□□□ 1.46
ABCB1-204ENST00000476862 GAS2L2Q8NHY3 880 aa24.16■■□□□ 1.46
ABCB1-204ENST00000476862 LGR6Q9HBX8 967 aa24.16■■□□□ 1.46
ABCB1-204ENST00000476862 CNTNAP4Q9C0A0 1308 aa24.15■■□□□ 1.46
ABCB1-204ENST00000476862 GRIN3BO60391 1043 aa24.15■■□□□ 1.46
ABCB1-204ENST00000476862 RPS6KA4O75676 772 aa24.15■■□□□ 1.46
ABCB1-204ENST00000476862 SLC4A9Q96Q91 983 aa24.15■■□□□ 1.46
ABCB1-204ENST00000476862 NLGN1Q8N2Q7 840 aa24.14■■□□□ 1.45
ABCB1-204ENST00000476862 VIRMAQ69YN4 1812 aaKnown RBP24.13■■□□□ 1.45
ABCB1-204ENST00000476862 TEFQ10587 303 aa24.12■■□□□ 1.45
ABCB1-204ENST00000476862 ARHGEF1Q92888 912 aaKnown RBP24.12■■□□□ 1.45
ABCB1-204ENST00000476862 GNAT3A8MTJ3 354 aa24.11■■□□□ 1.45
ABCB1-204ENST00000476862 CRKLP46109 303 aaKnown RBP24.11■■□□□ 1.45
ABCB1-204ENST00000476862 TTC5Q8N0Z6 440 aa24.11■■□□□ 1.45
ABCB1-204ENST00000476862 PPP2R1AP30153 589 aa24.1■■□□□ 1.45
ABCB1-204ENST00000476862 COL5A3P25940 1745 aaPredicted RBP24.1■■□□□ 1.45
ABCB1-204ENST00000476862 COL3A1P02461 1466 aaPredicted RBP24.09■■□□□ 1.45
ABCB1-204ENST00000476862 MMP10P09238 476 aa24.09■■□□□ 1.45
ABCB1-204ENST00000476862 U2AF1L5P0DN76 240 aaPredicted RBP24.09■■□□□ 1.45
ABCB1-204ENST00000476862 U2AF1Q01081 240 aaKnown RBP eCLIP24.09■■□□□ 1.45
ABCB1-204ENST00000476862 SLC39A6Q13433 755 aa24.09■■□□□ 1.45
ABCB1-204ENST00000476862 NEFMP07197 916 aa24.07■■□□□ 1.44
ABCB1-204ENST00000476862 PRKAR2BP31323 418 aa24.07■■□□□ 1.44
ABCB1-204ENST00000476862 PARP3Q9Y6F1 533 aa24.07■■□□□ 1.44
ABCB1-204ENST00000476862 MYH14Q7Z406 1995 aaKnown RBP24.06■■□□□ 1.44
ABCB1-204ENST00000476862 DNAJC10Q8IXB1 793 aa24.06■■□□□ 1.44
ABCB1-204ENST00000476862 CCDC87Q9NVE4 849 aa24.05■■□□□ 1.44
ABCB1-204ENST00000476862 ZPR1O75312 459 aa24.04■■□□□ 1.44
ABCB1-204ENST00000476862 RTF1Q92541 710 aaKnown RBP24.04■■□□□ 1.44
ABCB1-204ENST00000476862 MRC1P22897 1456 aa24.04■■□□□ 1.44
ABCB1-204ENST00000476862 GYS1P13807 737 aa24.03■■□□□ 1.44
ABCB1-204ENST00000476862 YBX3P16989 372 aaKnown RBP eCLIP24.03■■□□□ 1.44
ABCB1-204ENST00000476862 VSIG10Q8N0Z9 540 aa24.03■■□□□ 1.44
ABCB1-204ENST00000476862 ZNF784Q8NCA9 323 aaPredicted RBP24.03■■□□□ 1.44
ABCB1-204ENST00000476862 FCHSD2O94868 740 aa24.02■■□□□ 1.44
ABCB1-204ENST00000476862 STARD3NLO95772 234 aa24.02■■□□□ 1.44
ABCB1-204ENST00000476862 RSPH6AQ9H0K4 717 aa24.02■■□□□ 1.44
ABCB1-204ENST00000476862 INTS5Q6P9B9 1019 aaKnown RBP24.01■■□□□ 1.43
ABCB1-204ENST00000476862 TJP1Q07157 1748 aa24.01■■□□□ 1.43
ABCB1-204ENST00000476862 CYP19A1P11511 503 aaPredicted RBP24■■□□□ 1.43
ABCB1-204ENST00000476862 NPM2Q86SE8 214 aaKnown RBP24■■□□□ 1.43
ABCB1-204ENST00000476862 IL17REQ8NFR9 667 aa24■■□□□ 1.43
ABCB1-204ENST00000476862 TEX13AQ9BXU3 409 aaPredicted RBP24■■□□□ 1.43
ABCB1-204ENST00000476862 TGFB2P61812 414 aa23.99■■□□□ 1.43
ABCB1-204ENST00000476862 PHACTR3Q96KR7 559 aa23.99■■□□□ 1.43
ABCB1-204ENST00000476862 SRP68Q9UHB9 627 aaKnown RBP23.99■■□□□ 1.43
ABCB1-204ENST00000476862 WWC3Q9ULE0 1092 aa23.99■■□□□ 1.43
ABCB1-204ENST00000476862 ADAMTS7Q9UKP4 1686 aa23.99■■□□□ 1.43
ABCB1-204ENST00000476862 ZNF790Q6PG37 636 aa23.98■■□□□ 1.43
ABCB1-204ENST00000476862 USP42Q9H9J4 1324 aaKnown RBP23.98■■□□□ 1.43
ABCB1-204ENST00000476862 C4AP0C0L4 1744 aa23.97■■□□□ 1.43
ABCB1-204ENST00000476862 CICQ96RK0 1608 aaPredicted RBP23.97■■□□□ 1.43
ABCB1-204ENST00000476862 BTBD11A6QL63 1104 aa23.96■■□□□ 1.43
ABCB1-204ENST00000476862 CANXP27824 592 aaKnown RBP23.96■■□□□ 1.43
ABCB1-204ENST00000476862 FMNL2Q96PY5 1086 aa23.96■■□□□ 1.43
ABCB1-204ENST00000476862 PNNQ9H307 717 aaKnown RBP23.96■■□□□ 1.43
ABCB1-204ENST00000476862 UTRNP46939 3433 aa23.95■■□□□ 1.42
ABCB1-204ENST00000476862 KCPQ6ZWJ8 1503 aa23.94■■□□□ 1.42
ABCB1-204ENST00000476862 SOS1Q07889 1333 aaPredicted RBP23.94■■□□□ 1.42
ABCB1-204ENST00000476862 A0A087WZG4 1122 aa23.94■■□□□ 1.42
ABCB1-204ENST00000476862 FKBP8Q14318 412 aa23.94■■□□□ 1.42
ABCB1-204ENST00000476862 USPL1Q5W0Q7 1092 aa23.94■■□□□ 1.42
ABCB1-204ENST00000476862 ZBTB1Q9Y2K1 713 aa23.94■■□□□ 1.42
ABCB1-204ENST00000476862 ZNF496Q96IT1 587 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms