RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 P4HBP07237 508 aaKnown RBP9.63□□□□□ -0.87
LRCH3-215ENST00000476664 NUDT7P0C024 238 aa9.63□□□□□ -0.87
LRCH3-215ENST00000476664 HDGFP51858 240 aaKnown RBP9.63□□□□□ -0.87
LRCH3-215ENST00000476664 ECM1Q16610 540 aa9.63□□□□□ -0.87
LRCH3-215ENST00000476664 COLQQ9Y215 455 aaPredicted RBP9.63□□□□□ -0.87
LRCH3-215ENST00000476664 NEO1Q92859 1461 aa9.63□□□□□ -0.87
LRCH3-215ENST00000476664 PSDA5PKW4 1024 aaPredicted RBP9.62□□□□□ -0.87
LRCH3-215ENST00000476664 MARCH6O60337 910 aa9.62□□□□□ -0.87
LRCH3-215ENST00000476664 PTCD1O75127 700 aaKnown RBP9.62□□□□□ -0.87
LRCH3-215ENST00000476664 Q3C1V9 767 aa9.62□□□□□ -0.87
LRCH3-215ENST00000476664 RNF34Q969K3 372 aa9.62□□□□□ -0.87
LRCH3-215ENST00000476664 RBCK1Q9BYM8 510 aa9.62□□□□□ -0.87
LRCH3-215ENST00000476664 CAPN10Q9HC96 672 aa9.62□□□□□ -0.87
LRCH3-215ENST00000476664 DNMT3AQ9Y6K1 912 aaPredicted RBP9.62□□□□□ -0.87
LRCH3-215ENST00000476664 BIVM-ERCC5R4GMW8 1640 aa9.61□□□□□ -0.87
LRCH3-215ENST00000476664 GTF2F1P35269 517 aaKnown RBP eCLIP9.61□□□□□ -0.87
LRCH3-215ENST00000476664 PTK2Q05397 1052 aa9.61□□□□□ -0.87
LRCH3-215ENST00000476664 SWT1Q5T5J6 900 aaKnown RBP9.61□□□□□ -0.87
LRCH3-215ENST00000476664 METTL16Q86W50 562 aaKnown RBP9.61□□□□□ -0.87
LRCH3-215ENST00000476664 CERS3Q8IU89 383 aa9.61□□□□□ -0.87
LRCH3-215ENST00000476664 DHX38Q92620 1227 aaKnown RBP9.61□□□□□ -0.87
LRCH3-215ENST00000476664 PCDHB9Q9Y5E1 797 aa9.61□□□□□ -0.87
LRCH3-215ENST00000476664 CCDC144BQ3MJ40 725 aa9.6□□□□□ -0.87
LRCH3-215ENST00000476664 SOGA3Q5TF21 947 aa9.6□□□□□ -0.87
LRCH3-215ENST00000476664 TRAF7Q6Q0C0 670 aa9.6□□□□□ -0.87
LRCH3-215ENST00000476664 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.6□□□□□ -0.87
LRCH3-215ENST00000476664 CAMSAP1Q5T5Y3 1602 aa9.6□□□□□ -0.87
LRCH3-215ENST00000476664 ABCA9Q8IUA7 1624 aa9.6□□□□□ -0.87
LRCH3-215ENST00000476664 ALKQ9UM73 1620 aa9.6□□□□□ -0.87
LRCH3-215ENST00000476664 DKK1O94907 266 aa9.59□□□□□ -0.87
LRCH3-215ENST00000476664 LDLRAD1Q5T700 205 aa9.59□□□□□ -0.87
LRCH3-215ENST00000476664 SDE2Q6IQ49 451 aa9.59□□□□□ -0.87
LRCH3-215ENST00000476664 SEPT3Q9UH03 358 aa9.59□□□□□ -0.87
LRCH3-215ENST00000476664 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
LRCH3-215ENST00000476664 IQGAP2Q13576 1575 aa9.58□□□□□ -0.88
LRCH3-215ENST00000476664 ZFYVE16Q7Z3T8 1539 aa9.58□□□□□ -0.88
LRCH3-215ENST00000476664 NDUFB5O43674 189 aa9.58□□□□□ -0.88
LRCH3-215ENST00000476664 FAM13AO94988 1023 aa9.58□□□□□ -0.88
LRCH3-215ENST00000476664 CFHP08603 1231 aa9.58□□□□□ -0.88
LRCH3-215ENST00000476664 GTF2IP78347 998 aa9.58□□□□□ -0.88
LRCH3-215ENST00000476664 FMR1Q06787 632 aaKnown RBP eCLIP9.58□□□□□ -0.888e-8■■■■■ 27.8
LRCH3-215ENST00000476664 CCDC102BQ68D86 513 aa9.58□□□□□ -0.88
LRCH3-215ENST00000476664 MICAL1Q8TDZ2 1067 aa9.58□□□□□ -0.88
LRCH3-215ENST00000476664 GPKOWQ92917 476 aaPredicted RBP eCLIP9.58□□□□□ -0.88
LRCH3-215ENST00000476664 ZBTB7BO15156 539 aaPredicted RBP9.57□□□□□ -0.88
LRCH3-215ENST00000476664 SORBS3O60504 671 aa9.57□□□□□ -0.88
LRCH3-215ENST00000476664 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
LRCH3-215ENST00000476664 FANCCQ00597 558 aa9.57□□□□□ -0.88
LRCH3-215ENST00000476664 TMC7Q7Z402 723 aa9.57□□□□□ -0.88
LRCH3-215ENST00000476664 GMLQ99445 158 aa9.57□□□□□ -0.88
LRCH3-215ENST00000476664 METTL14Q9HCE5 456 aaKnown RBP9.57□□□□□ -0.88
LRCH3-215ENST00000476664 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.57□□□□□ -0.88
LRCH3-215ENST00000476664 C3P01024 1663 aa9.57□□□□□ -0.88
LRCH3-215ENST00000476664 EFCAB5A4FU69 1503 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 DENND4BO75064 1496 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-215ENST00000476664 TREHO43280 583 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 F12P00748 615 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-215ENST00000476664 ZNF76P36508 570 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 EGFLAMQ63HQ2 1017 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 PDXDC2PQ6P474 469 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 TMC4Q7Z404 712 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 ARMC2Q8NEN0 867 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 HELQQ8TDG4 1101 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 CITED4Q96RK1 184 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 HINFPQ9BQA5 517 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 MKNK1Q9BUB5 465 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 PARP2Q9UGN5 583 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 IQSEC3Q9UPP2 1182 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-215ENST00000476664 DOLKQ9UPQ8 538 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 KIAA1024Q9UPX6 916 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
LRCH3-215ENST00000476664 LDHBP07195 334 aaKnown RBP9.55□□□□□ -0.88
LRCH3-215ENST00000476664 MTMR3Q13615 1198 aa9.55□□□□□ -0.88
LRCH3-215ENST00000476664 COL26A1Q96A83 441 aa9.55□□□□□ -0.88
LRCH3-215ENST00000476664 VTI1BQ9UEU0 232 aa9.55□□□□□ -0.88
LRCH3-215ENST00000476664 ZMYM4Q5VZL5 1548 aa9.55□□□□□ -0.88
LRCH3-215ENST00000476664 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 RAB11FIP3O75154 756 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 CLSTN1O94985 981 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 IBSPP21815 317 aaPredicted RBP9.54□□□□□ -0.88
LRCH3-215ENST00000476664 IGBP1P78318 339 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 PSME1Q06323 249 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 KMT5BQ4FZB7 885 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 ARSIQ5FYB1 569 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 TPCN2Q8NHX9 752 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 TBX22Q9Y458 520 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 PTPRKQ15262 1439 aa9.54□□□□□ -0.88
LRCH3-215ENST00000476664 hCG_2014768A0A024R1R8 64 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 NPR3P17342 541 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 WEE1P30291 646 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 DNAJA1P31689 397 aaKnown RBP9.53□□□□□ -0.88
LRCH3-215ENST00000476664 RBL2Q08999 1139 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 PSMD2Q13200 908 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 DOK7Q18PE1 504 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 PROX2Q3B8N5 592 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 PMFBP1Q8TBY8 1022 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 TMC1Q8TDI8 760 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 SLC39A7Q92504 469 aa9.53□□□□□ -0.88
LRCH3-215ENST00000476664 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms