RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 MAP3K5Q99683 1374 aa20.05■□□□□ 0.8
SNX13-207ENST00000475800 MAPK8IP3Q9UPT6 1336 aa20.04■□□□□ 0.8
SNX13-207ENST00000475800 ADAMTS7Q9UKP4 1686 aa20.04■□□□□ 0.8
SNX13-207ENST00000475800 GNAT3A8MTJ3 354 aa20.04■□□□□ 0.8
SNX13-207ENST00000475800 MSH5O43196 834 aa20.04■□□□□ 0.8
SNX13-207ENST00000475800 MPRIPQ6WCQ1 1025 aa20.04■□□□□ 0.8
SNX13-207ENST00000475800 PHACTR3Q96KR7 559 aa20.04■□□□□ 0.8
SNX13-207ENST00000475800 SGIP1Q9BQI5 828 aa20.04■□□□□ 0.8
SNX13-207ENST00000475800 AKT1S1Q96B36 256 aa20.03■□□□□ 0.8
SNX13-207ENST00000475800 PLEKHF1Q96S99 279 aa20.03■□□□□ 0.8
SNX13-207ENST00000475800 LY75O60449 1722 aa20.02■□□□□ 0.8
SNX13-207ENST00000475800 HMGB2P26583 209 aaKnown RBP20.02■□□□□ 0.8
SNX13-207ENST00000475800 CABP4P57796 275 aa20.02■□□□□ 0.8
SNX13-207ENST00000475800 SLC27A3Q5K4L6 730 aa20.02■□□□□ 0.8
SNX13-207ENST00000475800 SMARCC1Q92922 1105 aaPredicted RBP20.02■□□□□ 0.8
SNX13-207ENST00000475800 CCNL1Q9UK58 526 aaPredicted RBP20.02■□□□□ 0.8
SNX13-207ENST00000475800 DLG5Q8TDM6 1919 aa20.02■□□□□ 0.79
SNX13-207ENST00000475800 RNMTO43148 476 aaKnown RBP20.01■□□□□ 0.79
SNX13-207ENST00000475800 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
SNX13-207ENST00000475800 PIGBQ92521 554 aa20.01■□□□□ 0.79
SNX13-207ENST00000475800 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
SNX13-207ENST00000475800 PNPLA7Q6ZV29 1317 aa20.01■□□□□ 0.79
SNX13-207ENST00000475800 MRC1P22897 1456 aa20■□□□□ 0.79
SNX13-207ENST00000475800 HTATSF1O43719 755 aaKnown RBP20■□□□□ 0.79
SNX13-207ENST00000475800 RTF1Q92541 710 aaKnown RBP19.99■□□□□ 0.79
SNX13-207ENST00000475800 ADAMTS8Q9UP79 889 aa19.99■□□□□ 0.79
SNX13-207ENST00000475800 UTRNP46939 3433 aa19.99■□□□□ 0.79
SNX13-207ENST00000475800 TUBGCP6Q96RT7 1819 aa19.98■□□□□ 0.79
SNX13-207ENST00000475800 POLD1P28340 1107 aa19.98■□□□□ 0.79
SNX13-207ENST00000475800 NFE2L2Q16236 605 aa19.98■□□□□ 0.79
SNX13-207ENST00000475800 RUNDC1Q96C34 613 aa19.98■□□□□ 0.79
SNX13-207ENST00000475800 SLC52A2Q9HAB3 445 aa19.98■□□□□ 0.79
SNX13-207ENST00000475800 PALLDQ8WX93 1383 aa19.97■□□□□ 0.79
SNX13-207ENST00000475800 LGR6Q9HBX8 967 aa19.97■□□□□ 0.79
SNX13-207ENST00000475800 TEFQ10587 303 aa19.96■□□□□ 0.79
SNX13-207ENST00000475800 GPR162Q16538 588 aa19.96■□□□□ 0.79
SNX13-207ENST00000475800 CCDC184Q52MB2 194 aa19.96■□□□□ 0.79
SNX13-207ENST00000475800 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
SNX13-207ENST00000475800 MSL1Q68DK7 614 aa19.96■□□□□ 0.79
SNX13-207ENST00000475800 NFATC2IPQ8NCF5 419 aa19.96■□□□□ 0.79
SNX13-207ENST00000475800 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.79
SNX13-207ENST00000475800 SIPA1L3O60292 1781 aaPredicted RBP19.95■□□□□ 0.78
SNX13-207ENST00000475800 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
SNX13-207ENST00000475800 PNISRQ8TF01 805 aaKnown RBP19.94■□□□□ 0.78
SNX13-207ENST00000475800 LMOD3Q0VAK6 560 aa19.93■□□□□ 0.78
SNX13-207ENST00000475800 COL23A1Q86Y22 540 aaPredicted RBP19.93■□□□□ 0.78
SNX13-207ENST00000475800 SLC16A10Q8TF71 515 aa19.93■□□□□ 0.78
SNX13-207ENST00000475800 ATG3Q9NT62 314 aa19.93■□□□□ 0.78
SNX13-207ENST00000475800 ASAP1Q9ULH1 1129 aa19.93■□□□□ 0.78
SNX13-207ENST00000475800 ZNF831Q5JPB2 1677 aa19.93■□□□□ 0.78
SNX13-207ENST00000475800 TMPOP42166 694 aaKnown RBP19.92■□□□□ 0.78
SNX13-207ENST00000475800 CCDC146Q8IYE0 955 aa19.92■□□□□ 0.78
SNX13-207ENST00000475800 ZNF784Q8NCA9 323 aaPredicted RBP19.92■□□□□ 0.78
SNX13-207ENST00000475800 NLGN2Q8NFZ4 835 aa19.92■□□□□ 0.78
SNX13-207ENST00000475800 TAF1LQ8IZX4 1826 aa19.92■□□□□ 0.78
SNX13-207ENST00000475800 SMIM5Q71RC9 77 aa19.91■□□□□ 0.78
SNX13-207ENST00000475800 LOC102724428A0A0B4J2F2 783 aa19.9■□□□□ 0.78
SNX13-207ENST00000475800 CCER2I3L3R5 266 aa19.9■□□□□ 0.78
SNX13-207ENST00000475800 SIK1P57059 783 aa19.9■□□□□ 0.78
SNX13-207ENST00000475800 RIPK4P57078 832 aa19.9■□□□□ 0.78
SNX13-207ENST00000475800 C5P01031 1676 aa19.9■□□□□ 0.78
SNX13-207ENST00000475800 QSER1Q2KHR3 1735 aa19.9■□□□□ 0.78
SNX13-207ENST00000475800 MCM10Q7L590 875 aa19.89■□□□□ 0.77
SNX13-207ENST00000475800 CHD4Q14839 1912 aa19.88■□□□□ 0.77
SNX13-207ENST00000475800 UBR2Q8IWV8 1755 aa19.88■□□□□ 0.77
SNX13-207ENST00000475800 PHF14O94880 888 aa19.87■□□□□ 0.77
SNX13-207ENST00000475800 TTC5Q8N0Z6 440 aa19.87■□□□□ 0.77
SNX13-207ENST00000475800 CICQ96RK0 1608 aaPredicted RBP19.87■□□□□ 0.77
SNX13-207ENST00000475800 GOLGB1Q14789 3259 aaKnown RBP19.86■□□□□ 0.77
SNX13-207ENST00000475800 ATP6V1AP38606 617 aa19.86■□□□□ 0.77
SNX13-207ENST00000475800 DCTN1Q14203 1278 aa19.86■□□□□ 0.77
SNX13-207ENST00000475800 RBM42Q9BTD8 480 aaKnown RBP19.86■□□□□ 0.77
SNX13-207ENST00000475800 BTBD11A6QL63 1104 aa19.85■□□□□ 0.77
SNX13-207ENST00000475800 TAF7Q15545 349 aaPredicted RBP19.85■□□□□ 0.77
SNX13-207ENST00000475800 APAF1O14727 1248 aa19.84■□□□□ 0.77
SNX13-207ENST00000475800 NEUROD2Q15784 382 aa19.84■□□□□ 0.77
SNX13-207ENST00000475800 ZNF790Q6PG37 636 aa19.84■□□□□ 0.77
SNX13-207ENST00000475800 AK7Q96M32 723 aa19.84■□□□□ 0.77
SNX13-207ENST00000475800 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
SNX13-207ENST00000475800 KCPQ6ZWJ8 1503 aa19.83■□□□□ 0.77
SNX13-207ENST00000475800 C4BP0C0L5 1744 aa19.83■□□□□ 0.77
SNX13-207ENST00000475800 PTCD1O75127 700 aaKnown RBP19.83■□□□□ 0.77
SNX13-207ENST00000475800 SLC39A6Q13433 755 aa19.83■□□□□ 0.77
SNX13-207ENST00000475800 AMIGO3Q86WK7 504 aa19.83■□□□□ 0.77
SNX13-207ENST00000475800 FAM9BQ8IZU0 186 aa19.83■□□□□ 0.77
SNX13-207ENST00000475800 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.77
SNX13-207ENST00000475800 WWC3Q9ULE0 1092 aa19.83■□□□□ 0.77
SNX13-207ENST00000475800 COL5A3P25940 1745 aaPredicted RBP19.82■□□□□ 0.76
SNX13-207ENST00000475800 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
SNX13-207ENST00000475800 KDM3BQ7LBC6 1761 aa19.81■□□□□ 0.76
SNX13-207ENST00000475800 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
SNX13-207ENST00000475800 TJP1Q07157 1748 aa19.81■□□□□ 0.76
SNX13-207ENST00000475800 COL24A1Q17RW2 1714 aa19.8■□□□□ 0.76
SNX13-207ENST00000475800 YBX3P16989 372 aaKnown RBP eCLIP19.8■□□□□ 0.76
SNX13-207ENST00000475800 CALD1Q05682 793 aaKnown RBP19.8■□□□□ 0.76
SNX13-207ENST00000475800 ITPK1Q13572 414 aa19.8■□□□□ 0.76
SNX13-207ENST00000475800 FMNL2Q96PY5 1086 aa19.8■□□□□ 0.76
SNX13-207ENST00000475800 SLC4A9Q96Q91 983 aa19.8■□□□□ 0.76
SNX13-207ENST00000475800 TRIM35Q9UPQ4 493 aa19.8■□□□□ 0.76
SNX13-207ENST00000475800 NGEFQ8N5V2 710 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms