RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 KDM6AO15550 1401 aaPredicted RBP27.46■■□□□ 1.99
SNX13-206ENST00000474067 ZNF831Q5JPB2 1677 aa27.46■■□□□ 1.99
SNX13-206ENST00000474067 SSFA2P28290 1259 aa27.45■■□□□ 1.98
SNX13-206ENST00000474067 GAS2L2Q8NHY3 880 aa27.45■■□□□ 1.98
SNX13-206ENST00000474067 TUBGCP6Q96RT7 1819 aa27.45■■□□□ 1.98
SNX13-206ENST00000474067 MAP3K5Q99683 1374 aa27.44■■□□□ 1.98
SNX13-206ENST00000474067 COL3A1P02461 1466 aaPredicted RBP27.44■■□□□ 1.98
SNX13-206ENST00000474067 COL23A1Q86Y22 540 aaPredicted RBP27.42■■□□□ 1.98
SNX13-206ENST00000474067 RBM42Q9BTD8 480 aaKnown RBP27.42■■□□□ 1.98
SNX13-206ENST00000474067 SCN11AQ9UI33 1791 aa27.41■■□□□ 1.98
SNX13-206ENST00000474067 PPP2R1AP30153 589 aa27.41■■□□□ 1.98
SNX13-206ENST00000474067 NFATC2IPQ8NCF5 419 aa27.41■■□□□ 1.98
SNX13-206ENST00000474067 FHDC1Q9C0D6 1143 aaPredicted RBP27.41■■□□□ 1.98
SNX13-206ENST00000474067 COL24A1Q17RW2 1714 aa27.4■■□□□ 1.98
SNX13-206ENST00000474067 SYT17Q9BSW7 474 aa27.39■■□□□ 1.98
SNX13-206ENST00000474067 SLC52A2Q9HAB3 445 aa27.39■■□□□ 1.98
SNX13-206ENST00000474067 NEFMP07197 916 aa27.38■■□□□ 1.97
SNX13-206ENST00000474067 MTHFSDQ2M296 383 aaKnown RBP27.37■■□□□ 1.97
SNX13-206ENST00000474067 RC3H1Q5TC82 1133 aaKnown RBP27.37■■□□□ 1.97
SNX13-206ENST00000474067 LINC00116Q8NCU8 138 aa27.37■■□□□ 1.97
SNX13-206ENST00000474067 RTCBQ9Y3I0 505 aaKnown RBP27.37■■□□□ 1.97
SNX13-206ENST00000474067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.36■■□□□ 1.97
SNX13-206ENST00000474067 GNPATO15228 680 aa27.36■■□□□ 1.97
SNX13-206ENST00000474067 RNMTO43148 476 aaKnown RBP27.36■■□□□ 1.97
SNX13-206ENST00000474067 ADRA2BP18089 450 aa27.36■■□□□ 1.97
SNX13-206ENST00000474067 PHF14O94880 888 aa27.35■■□□□ 1.97
SNX13-206ENST00000474067 ZEB1P37275 1124 aaPredicted RBP27.35■■□□□ 1.97
SNX13-206ENST00000474067 MRC1P22897 1456 aa27.35■■□□□ 1.97
SNX13-206ENST00000474067 CNTNAP4Q9C0A0 1308 aa27.35■■□□□ 1.97
SNX13-206ENST00000474067 UBR3Q6ZT12 1888 aa27.34■■□□□ 1.97
SNX13-206ENST00000474067 GNAT3A8MTJ3 354 aa27.34■■□□□ 1.97
SNX13-206ENST00000474067 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
SNX13-206ENST00000474067 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.97
SNX13-206ENST00000474067 ITPK1Q13572 414 aa27.34■■□□□ 1.97
SNX13-206ENST00000474067 FCHSD2O94868 740 aa27.33■■□□□ 1.97
SNX13-206ENST00000474067 PTCD1O75127 700 aaKnown RBP27.32■■□□□ 1.96
SNX13-206ENST00000474067 TEFQ10587 303 aa27.32■■□□□ 1.96
SNX13-206ENST00000474067 TRAPPC3LQ5T215 181 aa27.32■■□□□ 1.96
SNX13-206ENST00000474067 KLHL34Q8N239 644 aa27.32■■□□□ 1.96
SNX13-206ENST00000474067 PNNQ9H307 717 aaKnown RBP27.32■■□□□ 1.96
SNX13-206ENST00000474067 RALBP1Q15311 655 aa27.31■■□□□ 1.96
SNX13-206ENST00000474067 PRKAR2BP31323 418 aa27.3■■□□□ 1.96
SNX13-206ENST00000474067 TTC5Q8N0Z6 440 aa27.3■■□□□ 1.96
SNX13-206ENST00000474067 ADAMTS7Q9UKP4 1686 aa27.3■■□□□ 1.96
SNX13-206ENST00000474067 LGR6Q9HBX8 967 aa27.29■■□□□ 1.96
SNX13-206ENST00000474067 CICQ96RK0 1608 aaPredicted RBP27.29■■□□□ 1.96
SNX13-206ENST00000474067 COL5A3P25940 1745 aaPredicted RBP27.28■■□□□ 1.96
SNX13-206ENST00000474067 RTF1Q92541 710 aaKnown RBP27.28■■□□□ 1.96
SNX13-206ENST00000474067 RSPH6AQ9H0K4 717 aa27.28■■□□□ 1.96
SNX13-206ENST00000474067 RPS6KA4O75676 772 aa27.27■■□□□ 1.96
SNX13-206ENST00000474067 MSL1Q68DK7 614 aa27.27■■□□□ 1.96
SNX13-206ENST00000474067 VSIG10Q8N0Z9 540 aa27.27■■□□□ 1.96
SNX13-206ENST00000474067 VIRMAQ69YN4 1812 aaKnown RBP27.27■■□□□ 1.96
SNX13-206ENST00000474067 RFC4P35249 363 aa27.26■■□□□ 1.95
SNX13-206ENST00000474067 NLGN1Q8N2Q7 840 aa27.26■■□□□ 1.95
SNX13-206ENST00000474067 SLC4A9Q96Q91 983 aa27.25■■□□□ 1.95
SNX13-206ENST00000474067 CD2APQ9Y5K6 639 aa27.25■■□□□ 1.95
SNX13-206ENST00000474067 HTATSF1O43719 755 aaKnown RBP27.22■■□□□ 1.95
SNX13-206ENST00000474067 CRKLP46109 303 aaKnown RBP27.22■■□□□ 1.95
SNX13-206ENST00000474067 TEX13AQ9BXU3 409 aaPredicted RBP27.22■■□□□ 1.95
SNX13-206ENST00000474067 GPR162Q16538 588 aa27.21■■□□□ 1.95
SNX13-206ENST00000474067 YY1P25490 414 aa27.2■■□□□ 1.94
SNX13-206ENST00000474067 STARD3NLO95772 234 aa27.19■■□□□ 1.94
SNX13-206ENST00000474067 DDX10Q13206 875 aaKnown RBP27.19■■□□□ 1.94
SNX13-206ENST00000474067 ARHGEF1Q92888 912 aaKnown RBP27.19■■□□□ 1.94
SNX13-206ENST00000474067 SLC39A6Q13433 755 aa27.18■■□□□ 1.94
SNX13-206ENST00000474067 PHACTR3Q96KR7 559 aa27.18■■□□□ 1.94
SNX13-206ENST00000474067 CCDC87Q9NVE4 849 aa27.18■■□□□ 1.94
SNX13-206ENST00000474067 CEMIPQ8WUJ3 1361 aa27.18■■□□□ 1.94
SNX13-206ENST00000474067 TJP1Q07157 1748 aa27.18■■□□□ 1.94
SNX13-206ENST00000474067 ZNF790Q6PG37 636 aa27.17■■□□□ 1.94
SNX13-206ENST00000474067 AMIGO3Q86WK7 504 aa27.17■■□□□ 1.94
SNX13-206ENST00000474067 IL17REQ8NFR9 667 aa27.17■■□□□ 1.94
SNX13-206ENST00000474067 KCPQ6ZWJ8 1503 aa27.16■■□□□ 1.94
SNX13-206ENST00000474067 MAPK8IP3Q9UPT6 1336 aa27.16■■□□□ 1.94
SNX13-206ENST00000474067 GRIN3BO60391 1043 aa27.15■■□□□ 1.94
SNX13-206ENST00000474067 NPM2Q86SE8 214 aaKnown RBP27.15■■□□□ 1.94
SNX13-206ENST00000474067 DNAJC10Q8IXB1 793 aa27.15■■□□□ 1.94
SNX13-206ENST00000474067 FMNL2Q96PY5 1086 aa27.15■■□□□ 1.94
SNX13-206ENST00000474067 MYBBP1AQ9BQG0 1328 aaKnown RBP27.15■■□□□ 1.94
SNX13-206ENST00000474067 UBR2Q8IWV8 1755 aa27.14■■□□□ 1.94
SNX13-206ENST00000474067 BTBD11A6QL63 1104 aa27.14■■□□□ 1.94
SNX13-206ENST00000474067 ZPR1O75312 459 aa27.14■■□□□ 1.94
SNX13-206ENST00000474067 MMP10P09238 476 aa27.13■■□□□ 1.93
SNX13-206ENST00000474067 CYP19A1P11511 503 aaPredicted RBP27.13■■□□□ 1.93
SNX13-206ENST00000474067 PELP1Q8IZL8 1130 aaKnown RBP27.13■■□□□ 1.93
SNX13-206ENST00000474067 PARP3Q9Y6F1 533 aa27.12■■□□□ 1.93
SNX13-206ENST00000474067 MYH14Q7Z406 1995 aaKnown RBP27.11■■□□□ 1.93
SNX13-206ENST00000474067 HEG1Q9ULI3 1381 aa27.11■■□□□ 1.93
SNX13-206ENST00000474067 GYS1P13807 737 aa27.11■■□□□ 1.93
SNX13-206ENST00000474067 INTS5Q6P9B9 1019 aaKnown RBP27.11■■□□□ 1.93
SNX13-206ENST00000474067 SMIM5Q71RC9 77 aa27.11■■□□□ 1.93
SNX13-206ENST00000474067 SIPA1L3O60292 1781 aaPredicted RBP27.11■■□□□ 1.93
SNX13-206ENST00000474067 USP42Q9H9J4 1324 aaKnown RBP27.11■■□□□ 1.93
SNX13-206ENST00000474067 A0A087WZG4 1122 aa27.1■■□□□ 1.93
SNX13-206ENST00000474067 NLGN2Q8NFZ4 835 aa27.1■■□□□ 1.93
SNX13-206ENST00000474067 PNISRQ8TF01 805 aaKnown RBP27.09■■□□□ 1.93
SNX13-206ENST00000474067 C4AP0C0L4 1744 aa27.09■■□□□ 1.93
SNX13-206ENST00000474067 SOS1Q07889 1333 aaPredicted RBP27.08■■□□□ 1.93
SNX13-206ENST00000474067 ZNF496Q96IT1 587 aaPredicted RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms