RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
BRAT1-205ENST00000473879 PDGFDQ9GZP0 370 aaPredicted RBP17.53■□□□□ 0.4
BRAT1-205ENST00000473879 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
BRAT1-205ENST00000473879 U2SURPO15042 1029 aaKnown RBP17.52■□□□□ 0.4
BRAT1-205ENST00000473879 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
BRAT1-205ENST00000473879 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
BRAT1-205ENST00000473879 PNNQ9H307 717 aaKnown RBP17.51■□□□□ 0.39
BRAT1-205ENST00000473879 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
BRAT1-205ENST00000473879 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
BRAT1-205ENST00000473879 FCHSD2O94868 740 aa17.5■□□□□ 0.39
BRAT1-205ENST00000473879 AKAP4Q5JQC9 854 aa17.5■□□□□ 0.39
BRAT1-205ENST00000473879 ZNF831Q5JPB2 1677 aa17.5■□□□□ 0.39
BRAT1-205ENST00000473879 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
BRAT1-205ENST00000473879 ASAP1Q9ULH1 1129 aa17.49■□□□□ 0.39
BRAT1-205ENST00000473879 ZBTB7AO95365 584 aa17.48■□□□□ 0.39
BRAT1-205ENST00000473879 MTFR1LQ9H019 292 aa17.48■□□□□ 0.39
BRAT1-205ENST00000473879 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
BRAT1-205ENST00000473879 TFCP2L1Q9NZI6 479 aa17.48■□□□□ 0.39
BRAT1-205ENST00000473879 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
BRAT1-205ENST00000473879 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
BRAT1-205ENST00000473879 SIK1P57059 783 aa17.47■□□□□ 0.39
BRAT1-205ENST00000473879 CABP4P57796 275 aa17.47■□□□□ 0.39
BRAT1-205ENST00000473879 MTHFSDQ2M296 383 aaKnown RBP17.47■□□□□ 0.39
BRAT1-205ENST00000473879 PHACTR3Q96KR7 559 aa17.47■□□□□ 0.39
BRAT1-205ENST00000473879 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
BRAT1-205ENST00000473879 PNPLA7Q6ZV29 1317 aa17.47■□□□□ 0.39
BRAT1-205ENST00000473879 CEMIPQ8WUJ3 1361 aa17.46■□□□□ 0.39
BRAT1-205ENST00000473879 NEFMP07197 916 aa17.46■□□□□ 0.39
BRAT1-205ENST00000473879 PRKAR2BP31323 418 aa17.46■□□□□ 0.39
BRAT1-205ENST00000473879 SLC16A10Q8TF71 515 aa17.46■□□□□ 0.39
BRAT1-205ENST00000473879 RUNDC1Q96C34 613 aa17.46■□□□□ 0.39
BRAT1-205ENST00000473879 DLG5Q8TDM6 1919 aa17.46■□□□□ 0.39
BRAT1-205ENST00000473879 PTGER2P43116 358 aa17.45■□□□□ 0.38
BRAT1-205ENST00000473879 NGEFQ8N5V2 710 aa17.45■□□□□ 0.38
BRAT1-205ENST00000473879 ATF5Q9Y2D1 282 aaPredicted RBP17.45■□□□□ 0.38
BRAT1-205ENST00000473879 MAPK8IP3Q9UPT6 1336 aa17.45■□□□□ 0.38
BRAT1-205ENST00000473879 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
BRAT1-205ENST00000473879 COL24A1Q17RW2 1714 aa17.44■□□□□ 0.38
BRAT1-205ENST00000473879 UBR2Q8IWV8 1755 aa17.44■□□□□ 0.38
BRAT1-205ENST00000473879 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
BRAT1-205ENST00000473879 NFATC2IPQ8NCF5 419 aa17.44■□□□□ 0.38
BRAT1-205ENST00000473879 PPP1R1BQ9UD71 204 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-205ENST00000473879 MAP3K5Q99683 1374 aa17.43■□□□□ 0.38
BRAT1-205ENST00000473879 RNMTO43148 476 aaKnown RBP17.43■□□□□ 0.38
BRAT1-205ENST00000473879 SGIP1Q9BQI5 828 aa17.43■□□□□ 0.38
BRAT1-205ENST00000473879 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
BRAT1-205ENST00000473879 FLAD1Q8NFF5 587 aa17.42■□□□□ 0.38
BRAT1-205ENST00000473879 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
BRAT1-205ENST00000473879 SLC52A2Q9HAB3 445 aa17.42■□□□□ 0.38
BRAT1-205ENST00000473879 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
BRAT1-205ENST00000473879 UBR3Q6ZT12 1888 aa17.41■□□□□ 0.38
BRAT1-205ENST00000473879 ITPK1Q13572 414 aa17.41■□□□□ 0.38
BRAT1-205ENST00000473879 COL23A1Q86Y22 540 aaPredicted RBP17.41■□□□□ 0.38
BRAT1-205ENST00000473879 LINC00116Q8NCU8 138 aa17.41■□□□□ 0.38
BRAT1-205ENST00000473879 AK7Q96M32 723 aa17.41■□□□□ 0.38
BRAT1-205ENST00000473879 COL5A3P25940 1745 aaPredicted RBP17.41■□□□□ 0.38
BRAT1-205ENST00000473879 SLC4A9Q96Q91 983 aa17.4■□□□□ 0.38
BRAT1-205ENST00000473879 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
BRAT1-205ENST00000473879 KCPQ6ZWJ8 1503 aa17.39■□□□□ 0.37
BRAT1-205ENST00000473879 APAF1O14727 1248 aa17.39■□□□□ 0.37
BRAT1-205ENST00000473879 NCBP3Q53F19 620 aaKnown RBP17.39■□□□□ 0.37
BRAT1-205ENST00000473879 GNAT3A8MTJ3 354 aa17.38■□□□□ 0.37
BRAT1-205ENST00000473879 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
BRAT1-205ENST00000473879 TJP1Q07157 1748 aa17.38■□□□□ 0.37
BRAT1-205ENST00000473879 MSH5O43196 834 aa17.37■□□□□ 0.37
BRAT1-205ENST00000473879 SSFA2P28290 1259 aa17.37■□□□□ 0.37
BRAT1-205ENST00000473879 UTRNP46939 3433 aa17.37■□□□□ 0.37
BRAT1-205ENST00000473879 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
BRAT1-205ENST00000473879 PTCD1O75127 700 aaKnown RBP17.36■□□□□ 0.37
BRAT1-205ENST00000473879 RC3H1Q5TC82 1133 aaKnown RBP17.36■□□□□ 0.37
BRAT1-205ENST00000473879 ARXQ96QS3 562 aa17.36■□□□□ 0.37
BRAT1-205ENST00000473879 POLD1P28340 1107 aa17.35■□□□□ 0.37
BRAT1-205ENST00000473879 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
BRAT1-205ENST00000473879 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
BRAT1-205ENST00000473879 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.34■□□□□ 0.37
BRAT1-205ENST00000473879 GNPATO15228 680 aa17.34■□□□□ 0.37
BRAT1-205ENST00000473879 NFE2L2Q16236 605 aa17.34■□□□□ 0.37
BRAT1-205ENST00000473879 CNTNAP4Q9C0A0 1308 aa17.34■□□□□ 0.37
BRAT1-205ENST00000473879 SALL2Q9Y467 1007 aaPredicted RBP17.34■□□□□ 0.37
BRAT1-205ENST00000473879 PHF14O94880 888 aa17.33■□□□□ 0.36
BRAT1-205ENST00000473879 TMPOP42166 694 aaKnown RBP17.33■□□□□ 0.36
BRAT1-205ENST00000473879 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
BRAT1-205ENST00000473879 FHDC1Q9C0D6 1143 aaPredicted RBP17.33■□□□□ 0.36
BRAT1-205ENST00000473879 SENP3-EIF4A1A0A087X0R7 540 aa17.32■□□□□ 0.36
BRAT1-205ENST00000473879 TEFQ10587 303 aa17.32■□□□□ 0.36
BRAT1-205ENST00000473879 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
BRAT1-205ENST00000473879 RTCBQ9Y3I0 505 aaKnown RBP17.32■□□□□ 0.36
BRAT1-205ENST00000473879 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
BRAT1-205ENST00000473879 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
BRAT1-205ENST00000473879 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
BRAT1-205ENST00000473879 SYT17Q9BSW7 474 aa17.31■□□□□ 0.36
BRAT1-205ENST00000473879 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
BRAT1-205ENST00000473879 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
BRAT1-205ENST00000473879 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
BRAT1-205ENST00000473879 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
BRAT1-205ENST00000473879 ADRA2BP18089 450 aa17.3■□□□□ 0.36
BRAT1-205ENST00000473879 TRAPPC3LQ5T215 181 aa17.3■□□□□ 0.36
BRAT1-205ENST00000473879 VSIG10Q8N0Z9 540 aa17.3■□□□□ 0.36
BRAT1-205ENST00000473879 MYH14Q7Z406 1995 aaKnown RBP17.29■□□□□ 0.36
BRAT1-205ENST00000473879 CRKLP46109 303 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms