RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
SP140-208ENST00000473711 BCAR3O75815 825 aa13.88□□□□□ -0.19
SP140-208ENST00000473711 TAF7Q15545 349 aaPredicted RBP13.88□□□□□ -0.19
SP140-208ENST00000473711 ZCRB1Q8TBF4 217 aaKnown RBP13.88□□□□□ -0.19
SP140-208ENST00000473711 NGLY1Q96IV0 654 aa13.88□□□□□ -0.19
SP140-208ENST00000473711 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
SP140-208ENST00000473711 SPATA31A6Q5VVP1 1343 aa13.88□□□□□ -0.19
SP140-208ENST00000473711 ELL2O00472 640 aaPredicted RBP13.87□□□□□ -0.19
SP140-208ENST00000473711 PLIN1O60240 522 aa13.87□□□□□ -0.19
SP140-208ENST00000473711 CT47B1P0C2W7 299 aaPredicted RBP13.87□□□□□ -0.19
SP140-208ENST00000473711 PHKG2P15735 406 aa13.87□□□□□ -0.19
SP140-208ENST00000473711 RARSP54136 660 aaKnown RBP13.87□□□□□ -0.19
SP140-208ENST00000473711 IFNL2Q8IZJ0 200 aa13.87□□□□□ -0.19
SP140-208ENST00000473711 TSPYL4Q9UJ04 414 aa13.87□□□□□ -0.19
SP140-208ENST00000473711 CYP27B1O15528 508 aa13.86□□□□□ -0.19
SP140-208ENST00000473711 TSPYL6Q8N831 410 aa13.86□□□□□ -0.19
SP140-208ENST00000473711 C8orf58Q8NAV2 365 aa13.86□□□□□ -0.19
SP140-208ENST00000473711 OVOS2A0A0G2JMS6 1433 aa13.85□□□□□ -0.19
SP140-208ENST00000473711 VAMP4O75379 141 aa13.85□□□□□ -0.19
SP140-208ENST00000473711 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
SP140-208ENST00000473711 TEFQ10587 303 aa13.85□□□□□ -0.19
SP140-208ENST00000473711 MEX3CQ5U5Q3 659 aaKnown RBP13.85□□□□□ -0.19
SP140-208ENST00000473711 CCDC9Q9Y3X0 531 aaKnown RBP13.85□□□□□ -0.19
SP140-208ENST00000473711 CEMIPQ8WUJ3 1361 aa13.84□□□□□ -0.19
SP140-208ENST00000473711 KRT24Q2M2I5 525 aa13.84□□□□□ -0.19
SP140-208ENST00000473711 TWISTNBQ3B726 338 aaPredicted RBP13.84□□□□□ -0.19
SP140-208ENST00000473711 UNC5CLQ8IV45 518 aa13.84□□□□□ -0.19
SP140-208ENST00000473711 DDX54Q8TDD1 881 aaKnown RBP13.84□□□□□ -0.19
SP140-208ENST00000473711 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
SP140-208ENST00000473711 RGS17Q9UGC6 210 aaPredicted RBP13.84□□□□□ -0.19
SP140-208ENST00000473711 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.19
SP140-208ENST00000473711 HSP90AB1P08238 724 aaKnown RBP13.83□□□□□ -0.2
SP140-208ENST00000473711 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.83□□□□□ -0.2
SP140-208ENST00000473711 BABAM1Q9NWV8 329 aa13.83□□□□□ -0.2
SP140-208ENST00000473711 SLIT2O94813 1529 aa13.83□□□□□ -0.2
SP140-208ENST00000473711 SPATA31A1Q5TZJ5 1347 aa13.83□□□□□ -0.2
SP140-208ENST00000473711 PCDH11XQ9BZA7 1347 aa13.83□□□□□ -0.2
SP140-208ENST00000473711 PCDH11YQ9BZA8 1340 aa13.83□□□□□ -0.2
SP140-208ENST00000473711 PLCH1Q4KWH8 1693 aa13.82□□□□□ -0.2
SP140-208ENST00000473711 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
SP140-208ENST00000473711 CLCN6P51797 869 aa13.82□□□□□ -0.2
SP140-208ENST00000473711 FNBP4Q8N3X1 1017 aaPredicted RBP13.82□□□□□ -0.2
SP140-208ENST00000473711 SSH1Q8WYL5 1049 aa13.82□□□□□ -0.2
SP140-208ENST00000473711 DCAF5Q96JK2 942 aa13.82□□□□□ -0.2
SP140-208ENST00000473711 SPATA31A5Q5VU36 1347 aa13.82□□□□□ -0.2
SP140-208ENST00000473711 SPATA31A7Q8IWB4 1347 aa13.82□□□□□ -0.2
SP140-208ENST00000473711 LRP6O75581 1613 aa13.82□□□□□ -0.2
SP140-208ENST00000473711 TCERG1O14776 1098 aaKnown RBP13.81□□□□□ -0.2
SP140-208ENST00000473711 KCNQ3O43525 872 aa13.81□□□□□ -0.2
SP140-208ENST00000473711 ZNF579Q8NAF0 562 aaKnown RBP13.81□□□□□ -0.2
SP140-208ENST00000473711 FRAT1Q92837 279 aaPredicted RBP13.81□□□□□ -0.2
SP140-208ENST00000473711 SMC4Q9NTJ3 1288 aa13.81□□□□□ -0.2
SP140-208ENST00000473711 USP21Q9UK80 565 aa13.81□□□□□ -0.2
SP140-208ENST00000473711 THRAP3Q9Y2W1 955 aaKnown RBP13.81□□□□□ -0.2
SP140-208ENST00000473711 EXOC5O00471 708 aa13.8□□□□□ -0.2
SP140-208ENST00000473711 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
SP140-208ENST00000473711 VPS72Q15906 364 aa13.8□□□□□ -0.2
SP140-208ENST00000473711 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
SP140-208ENST00000473711 C20orf194Q5TEA3 1177 aa13.8□□□□□ -0.2
SP140-208ENST00000473711 NFATC2IPQ8NCF5 419 aa13.8□□□□□ -0.2
SP140-208ENST00000473711 DISP2A7MBM2 1401 aa13.8□□□□□ -0.2
SP140-208ENST00000473711 KDM6AO15550 1401 aaPredicted RBP13.8□□□□□ -0.2
SP140-208ENST00000473711 LRRC37A3O60309 1634 aa13.79□□□□□ -0.2
SP140-208ENST00000473711 PKD1L3Q7Z443 1732 aa13.79□□□□□ -0.2
SP140-208ENST00000473711 NRAPQ86VF7 1730 aa13.79□□□□□ -0.2
SP140-208ENST00000473711 PARP4Q9UKK3 1724 aaKnown RBP13.79□□□□□ -0.2
SP140-208ENST00000473711 CABP4P57796 275 aa13.79□□□□□ -0.2
SP140-208ENST00000473711 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
SP140-208ENST00000473711 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
SP140-208ENST00000473711 CDCA7Q9BWT1 371 aaPredicted RBP13.79□□□□□ -0.2
SP140-208ENST00000473711 SLC52A2Q9HAB3 445 aa13.79□□□□□ -0.2
SP140-208ENST00000473711 BCL9LQ86UU0 1499 aa13.79□□□□□ -0.2
SP140-208ENST00000473711 EIF4A1P60842 406 aaKnown RBP13.78□□□□□ -0.2
SP140-208ENST00000473711 ERICH6BQ5W0A0 696 aa13.78□□□□□ -0.2
SP140-208ENST00000473711 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
SP140-208ENST00000473711 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
SP140-208ENST00000473711 EXOC6Q8TAG9 804 aa13.77□□□□□ -0.21
SP140-208ENST00000473711 CRBNQ96SW2 442 aa13.77□□□□□ -0.21
SP140-208ENST00000473711 NWD2Q9ULI1 1742 aa13.77□□□□□ -0.21
SP140-208ENST00000473711 NOB1Q9ULX3 412 aaKnown RBP13.77□□□□□ -0.21
SP140-208ENST00000473711 AFF2P51816 1311 aa13.76□□□□□ -0.21
SP140-208ENST00000473711 ERVV-2B6SEH9 535 aa13.76□□□□□ -0.21
SP140-208ENST00000473711 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
SP140-208ENST00000473711 DDB1Q16531 1140 aa13.76□□□□□ -0.21
SP140-208ENST00000473711 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
SP140-208ENST00000473711 ZKSCAN2Q63HK3 967 aa13.76□□□□□ -0.21
SP140-208ENST00000473711 TNNQ9UQP3 1299 aa13.76□□□□□ -0.21
SP140-208ENST00000473711 SRCAPQ6ZRS2 3230 aa13.76□□□□□ -0.21
SP140-208ENST00000473711 PANK1Q8TE04 598 aa13.75□□□□□ -0.21
SP140-208ENST00000473711 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
SP140-208ENST00000473711 IPO8O15397 1037 aaKnown RBP13.74□□□□□ -0.21
SP140-208ENST00000473711 BRPF1P55201 1214 aaPredicted RBP13.74□□□□□ -0.21
SP140-208ENST00000473711 PDE3AQ14432 1141 aa13.74□□□□□ -0.21
SP140-208ENST00000473711 ZNF790Q6PG37 636 aa13.74□□□□□ -0.21
SP140-208ENST00000473711 PPP4R2Q9NY27 417 aa13.74□□□□□ -0.21
SP140-208ENST00000473711 ADAMTS7Q9UKP4 1686 aa13.74□□□□□ -0.21
SP140-208ENST00000473711 SCN11AQ9UI33 1791 aa13.73□□□□□ -0.21
SP140-208ENST00000473711 EIF2S2P20042 333 aaKnown RBP13.73□□□□□ -0.21
SP140-208ENST00000473711 CLUAP1Q96AJ1 413 aa13.73□□□□□ -0.21
SP140-208ENST00000473711 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms