RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 DDX54Q8TDD1 881 aaKnown RBP25.23■■□□□ 1.63
CHMP2B-204ENST00000472024 MARCH10Q8NA82 808 aaPredicted RBP25.21■■□□□ 1.63
CHMP2B-204ENST00000472024 RBM6P78332 1123 aaKnown RBP25.2■■□□□ 1.62
CHMP2B-204ENST00000472024 TSPYL4Q9UJ04 414 aa25.2■■□□□ 1.62
CHMP2B-204ENST00000472024 PAPPAQ13219 1627 aa25.19■■□□□ 1.62
CHMP2B-204ENST00000472024 SOS1Q07889 1333 aaPredicted RBP25.19■■□□□ 1.62
CHMP2B-204ENST00000472024 ZNF428Q96B54 188 aa25.19■■□□□ 1.62
CHMP2B-204ENST00000472024 EXOSC9Q06265 439 aaKnown RBP25.18■■□□□ 1.62
CHMP2B-204ENST00000472024 RGS17Q9UGC6 210 aaPredicted RBP25.18■■□□□ 1.62
CHMP2B-204ENST00000472024 LAS1LQ9Y4W2 734 aaKnown RBP25.18■■□□□ 1.62
CHMP2B-204ENST00000472024 HEG1Q9ULI3 1381 aa25.18■■□□□ 1.62
CHMP2B-204ENST00000472024 RNF123Q5XPI4 1314 aa25.17■■□□□ 1.62
CHMP2B-204ENST00000472024 BTBD11A6QL63 1104 aa25.16■■□□□ 1.62
CHMP2B-204ENST00000472024 CABP4P57796 275 aa25.15■■□□□ 1.62
CHMP2B-204ENST00000472024 SEPT12Q8IYM1 358 aa25.15■■□□□ 1.62
CHMP2B-204ENST00000472024 NFATC2IPQ8NCF5 419 aa25.15■■□□□ 1.62
CHMP2B-204ENST00000472024 RCAN3Q9UKA8 241 aa25.15■■□□□ 1.62
CHMP2B-204ENST00000472024 MIS18AQ9NYP9 233 aa25.14■■□□□ 1.62
CHMP2B-204ENST00000472024 DOT1LQ8TEK3 1739 aa25.14■■□□□ 1.61
CHMP2B-204ENST00000472024 ITGB4P16144 1822 aa25.14■■□□□ 1.61
CHMP2B-204ENST00000472024 HOXB7P09629 217 aa25.13■■□□□ 1.61
CHMP2B-204ENST00000472024 EIF4A1P60842 406 aaKnown RBP25.13■■□□□ 1.61
CHMP2B-204ENST00000472024 UBR2Q8IWV8 1755 aa25.13■■□□□ 1.61
CHMP2B-204ENST00000472024 VAMP4O75379 141 aa25.12■■□□□ 1.61
CHMP2B-204ENST00000472024 C8orf58Q8NAV2 365 aa25.12■■□□□ 1.61
CHMP2B-204ENST00000472024 ZNF790Q6PG37 636 aa25.11■■□□□ 1.61
CHMP2B-204ENST00000472024 TSPYL6Q8N831 410 aa25.1■■□□□ 1.61
CHMP2B-204ENST00000472024 RARSP54136 660 aaKnown RBP25.09■■□□□ 1.61
CHMP2B-204ENST00000472024 BRPF1P55201 1214 aaPredicted RBP25.09■■□□□ 1.61
CHMP2B-204ENST00000472024 TWISTNBQ3B726 338 aaPredicted RBP25.09■■□□□ 1.61
CHMP2B-204ENST00000472024 ALDH1L2Q3SY69 923 aa25.09■■□□□ 1.61
CHMP2B-204ENST00000472024 TMOD3Q9NYL9 352 aa25.09■■□□□ 1.61
CHMP2B-204ENST00000472024 KCPQ6ZWJ8 1503 aa25.08■■□□□ 1.61
CHMP2B-204ENST00000472024 KCNQ3O43525 872 aa25.08■■□□□ 1.61
CHMP2B-204ENST00000472024 PIGBQ92521 554 aa25.08■■□□□ 1.61
CHMP2B-204ENST00000472024 RXRBP28702 533 aa25.07■■□□□ 1.6
CHMP2B-204ENST00000472024 NHSQ6T4R5 1651 aa25.07■■□□□ 1.6
CHMP2B-204ENST00000472024 KRT24Q2M2I5 525 aa25.06■■□□□ 1.6
CHMP2B-204ENST00000472024 POTEAQ6S8J7 498 aa25.06■■□□□ 1.6
CHMP2B-204ENST00000472024 BRWD3Q6RI45 1802 aa25.06■■□□□ 1.6
CHMP2B-204ENST00000472024 RGS12O14924 1447 aa25.04■■□□□ 1.6
CHMP2B-204ENST00000472024 A0A0G2JS52 829 aa25.04■■□□□ 1.6
CHMP2B-204ENST00000472024 PRIM1P49642 420 aaKnown RBP25.04■■□□□ 1.6
CHMP2B-204ENST00000472024 MYT1Q01538 1121 aa25.04■■□□□ 1.6
CHMP2B-204ENST00000472024 CHMP4AQ9BY43 222 aa25.04■■□□□ 1.6
CHMP2B-204ENST00000472024 GIGYF1O75420 1035 aaPredicted RBP25.03■■□□□ 1.6
CHMP2B-204ENST00000472024 SLC39A6Q13433 755 aa25.03■■□□□ 1.6
CHMP2B-204ENST00000472024 CICQ96RK0 1608 aaPredicted RBP25.03■■□□□ 1.6
CHMP2B-204ENST00000472024 KRT27Q7Z3Y8 459 aa25.02■■□□□ 1.6
CHMP2B-204ENST00000472024 TTC5Q8N0Z6 440 aa25.02■■□□□ 1.6
CHMP2B-204ENST00000472024 SSH1Q8WYL5 1049 aa25.02■■□□□ 1.6
CHMP2B-204ENST00000472024 ZNF496Q96IT1 587 aaPredicted RBP25.02■■□□□ 1.6
CHMP2B-204ENST00000472024 FMNL2Q96PY5 1086 aa25.02■■□□□ 1.6
CHMP2B-204ENST00000472024 ATG3Q9NT62 314 aa25.02■■□□□ 1.6
CHMP2B-204ENST00000472024 SBF2Q86WG5 1849 aa25.02■■□□□ 1.6
CHMP2B-204ENST00000472024 SUPT16HQ9Y5B9 1047 aaKnown RBP25.01■■□□□ 1.59
CHMP2B-204ENST00000472024 VSIG10Q8N0Z9 540 aa25■■□□□ 1.59
CHMP2B-204ENST00000472024 RRP1P56182 461 aaKnown RBP24.99■■□□□ 1.59
CHMP2B-204ENST00000472024 ZNF831Q5JPB2 1677 aa24.99■■□□□ 1.59
CHMP2B-204ENST00000472024 LAMB4A4D0S4 1761 aa24.98■■□□□ 1.59
CHMP2B-204ENST00000472024 C5P01031 1676 aa24.98■■□□□ 1.59
CHMP2B-204ENST00000472024 ELL2O00472 640 aaPredicted RBP24.98■■□□□ 1.59
CHMP2B-204ENST00000472024 BCAR3O75815 825 aa24.98■■□□□ 1.59
CHMP2B-204ENST00000472024 SNRPA1P09661 255 aaKnown RBP24.98■■□□□ 1.59
CHMP2B-204ENST00000472024 FAM196AQ6ZSG2 479 aa24.98■■□□□ 1.59
CHMP2B-204ENST00000472024 CACNA1FO60840 1977 aa24.98■■□□□ 1.59
CHMP2B-204ENST00000472024 MRPL50Q8N5N7 158 aaKnown RBP24.97■■□□□ 1.59
CHMP2B-204ENST00000472024 ASAP1Q9ULH1 1129 aa24.97■■□□□ 1.59
CHMP2B-204ENST00000472024 ACSBG1Q96GR2 724 aa24.96■■□□□ 1.59
CHMP2B-204ENST00000472024 KCNQ2O43526 872 aa24.95■■□□□ 1.58
CHMP2B-204ENST00000472024 CCDC30Q5VVM6 783 aa24.95■■□□□ 1.58
CHMP2B-204ENST00000472024 SMARCC1Q92922 1105 aaPredicted RBP24.95■■□□□ 1.58
CHMP2B-204ENST00000472024 SMC4Q9NTJ3 1288 aa24.95■■□□□ 1.58
CHMP2B-204ENST00000472024 KIF16BQ96L93 1317 aa24.94■■□□□ 1.58
CHMP2B-204ENST00000472024 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.94■■□□□ 1.58
CHMP2B-204ENST00000472024 BTAF1O14981 1849 aa24.93■■□□□ 1.58
CHMP2B-204ENST00000472024 HDGFL1Q5TGJ6 251 aa24.93■■□□□ 1.58
CHMP2B-204ENST00000472024 ARHGAP45Q92619 1136 aa24.93■■□□□ 1.58
CHMP2B-204ENST00000472024 SYTL4Q96C24 671 aaPredicted RBP24.93■■□□□ 1.58
CHMP2B-204ENST00000472024 BCL11BQ9C0K0 894 aaPredicted RBP24.93■■□□□ 1.58
CHMP2B-204ENST00000472024 ERBB4Q15303 1308 aa24.92■■□□□ 1.58
CHMP2B-204ENST00000472024 KAT6BQ8WYB5 2073 aa24.91■■□□□ 1.58
CHMP2B-204ENST00000472024 TEX13AQ9BXU3 409 aaPredicted RBP24.91■■□□□ 1.58
CHMP2B-204ENST00000472024 PALLDQ8WX93 1383 aa24.91■■□□□ 1.58
CHMP2B-204ENST00000472024 TJP1Q07157 1748 aa24.9■■□□□ 1.58
CHMP2B-204ENST00000472024 PRAMEF22A3QJZ6 481 aa24.9■■□□□ 1.58
CHMP2B-204ENST00000472024 FAM182BQ5T319 152 aa24.89■■□□□ 1.58
CHMP2B-204ENST00000472024 SLC4A9Q96Q91 983 aa24.89■■□□□ 1.58
CHMP2B-204ENST00000472024 BCL2L13Q9BXK5 485 aa24.89■■□□□ 1.58
CHMP2B-204ENST00000472024 PDE3AQ14432 1141 aa24.88■■□□□ 1.57
CHMP2B-204ENST00000472024 STK31Q9BXU1 1019 aa24.88■■□□□ 1.57
CHMP2B-204ENST00000472024 DBF4Q9UBU7 674 aaPredicted RBP24.88■■□□□ 1.57
CHMP2B-204ENST00000472024 LY75O60449 1722 aa24.87■■□□□ 1.57
CHMP2B-204ENST00000472024 IPO8O15397 1037 aaKnown RBP24.87■■□□□ 1.57
CHMP2B-204ENST00000472024 PTCD1O75127 700 aaKnown RBP24.87■■□□□ 1.57
CHMP2B-204ENST00000472024 USP16Q9Y5T5 823 aa24.87■■□□□ 1.57
CHMP2B-204ENST00000472024 PTPRCP08575 1304 aa24.86■■□□□ 1.57
CHMP2B-204ENST00000472024 PDIA6Q15084 440 aa24.86■■□□□ 1.57
CHMP2B-204ENST00000472024 ZKSCAN2Q63HK3 967 aa24.86■■□□□ 1.57
CHMP2B-204ENST00000472024 PTF1AQ7RTS3 328 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms