RNA–Protein interactions for RNA: ENST00000471143.5

TSC2-212, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-212ENST00000471143 LGR6Q9HBX8 967 aa16.18■□□□□ 0.18
TSC2-212ENST00000471143 POLD1P28340 1107 aa16.17■□□□□ 0.18
TSC2-212ENST00000471143 SMIM5Q71RC9 77 aa16.17■□□□□ 0.18
TSC2-212ENST00000471143 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
TSC2-212ENST00000471143 LY75O60449 1722 aa16.16■□□□□ 0.18
TSC2-212ENST00000471143 TOGARAM1Q9Y4F4 1720 aa16.16■□□□□ 0.18
TSC2-212ENST00000471143 CFAP53Q96M91 514 aa16.16■□□□□ 0.18
TSC2-212ENST00000471143 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
TSC2-212ENST00000471143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
TSC2-212ENST00000471143 PTCD1O75127 700 aaKnown RBP16.14■□□□□ 0.17
TSC2-212ENST00000471143 SLC52A2Q9HAB3 445 aa16.14■□□□□ 0.17
TSC2-212ENST00000471143 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
TSC2-212ENST00000471143 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
TSC2-212ENST00000471143 PHF14O94880 888 aa16.13■□□□□ 0.17
TSC2-212ENST00000471143 SSFA2P28290 1259 aa16.13■□□□□ 0.17
TSC2-212ENST00000471143 MSL1Q68DK7 614 aa16.13■□□□□ 0.17
TSC2-212ENST00000471143 GNPATO15228 680 aa16.12■□□□□ 0.17
TSC2-212ENST00000471143 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
TSC2-212ENST00000471143 NUDCQ9Y266 331 aa16.12■□□□□ 0.17
TSC2-212ENST00000471143 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
TSC2-212ENST00000471143 PHACTR3Q96KR7 559 aa16.11■□□□□ 0.17
TSC2-212ENST00000471143 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
TSC2-212ENST00000471143 ITGB4P16144 1822 aa16.1■□□□□ 0.17
TSC2-212ENST00000471143 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
TSC2-212ENST00000471143 GAS2L2Q8NHY3 880 aa16.1■□□□□ 0.17
TSC2-212ENST00000471143 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
TSC2-212ENST00000471143 RPS6KA4O75676 772 aa16.09■□□□□ 0.17
TSC2-212ENST00000471143 FCHSD2O94868 740 aa16.09■□□□□ 0.17
TSC2-212ENST00000471143 U2AF1L5P0DN76 240 aaPredicted RBP16.09■□□□□ 0.17
TSC2-212ENST00000471143 PRKAR2BP31323 418 aa16.09■□□□□ 0.17
TSC2-212ENST00000471143 U2AF1Q01081 240 aaKnown RBP eCLIP16.09■□□□□ 0.17
TSC2-212ENST00000471143 SLC39A6Q13433 755 aa16.09■□□□□ 0.17
TSC2-212ENST00000471143 TRAPPC3LQ5T215 181 aa16.09■□□□□ 0.17
TSC2-212ENST00000471143 RTCBQ9Y3I0 505 aaKnown RBP16.09■□□□□ 0.17
TSC2-212ENST00000471143 KLHL34Q8N239 644 aa16.08■□□□□ 0.16
TSC2-212ENST00000471143 ARHGEF1Q92888 912 aaKnown RBP16.08■□□□□ 0.16
TSC2-212ENST00000471143 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
TSC2-212ENST00000471143 CRKLP46109 303 aaKnown RBP16.07■□□□□ 0.16
TSC2-212ENST00000471143 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
TSC2-212ENST00000471143 C4BP0C0L5 1744 aa16.07■□□□□ 0.16
TSC2-212ENST00000471143 ADRA2BP18089 450 aa16.06■□□□□ 0.16
TSC2-212ENST00000471143 NLGN2Q8NFZ4 835 aa16.06■□□□□ 0.16
TSC2-212ENST00000471143 QSER1Q2KHR3 1735 aa16.05■□□□□ 0.16
TSC2-212ENST00000471143 C5P01031 1676 aa16.05■□□□□ 0.16
TSC2-212ENST00000471143 INTS5Q6P9B9 1019 aaKnown RBP16.05■□□□□ 0.16
TSC2-212ENST00000471143 DNAJC10Q8IXB1 793 aa16.04■□□□□ 0.16
TSC2-212ENST00000471143 CD2APQ9Y5K6 639 aa16.04■□□□□ 0.16
TSC2-212ENST00000471143 CYP19A1P11511 503 aaPredicted RBP16.03■□□□□ 0.16
TSC2-212ENST00000471143 YY1P25490 414 aa16.03■□□□□ 0.16
TSC2-212ENST00000471143 RFC4P35249 363 aa16.03■□□□□ 0.16
TSC2-212ENST00000471143 TEFQ10587 303 aa16.03■□□□□ 0.16
TSC2-212ENST00000471143 GPR162Q16538 588 aa16.03■□□□□ 0.16
TSC2-212ENST00000471143 VSIG10Q8N0Z9 540 aa16.03■□□□□ 0.16
TSC2-212ENST00000471143 NLGN1Q8N2Q7 840 aa16.03■□□□□ 0.16
TSC2-212ENST00000471143 GYS1P13807 737 aa16.02■□□□□ 0.16
TSC2-212ENST00000471143 RALBP1Q15311 655 aa16.02■□□□□ 0.16
TSC2-212ENST00000471143 TUBGCP6Q96RT7 1819 aa16.02■□□□□ 0.16
TSC2-212ENST00000471143 CEMIPQ8WUJ3 1361 aa16.01■□□□□ 0.15
TSC2-212ENST00000471143 TAF1LQ8IZX4 1826 aa16.01■□□□□ 0.15
TSC2-212ENST00000471143 MMP10P09238 476 aa16.01■□□□□ 0.15
TSC2-212ENST00000471143 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
TSC2-212ENST00000471143 CCDC87Q9NVE4 849 aa16.01■□□□□ 0.15
TSC2-212ENST00000471143 MRC1P22897 1456 aa16.01■□□□□ 0.15
TSC2-212ENST00000471143 COL24A1Q17RW2 1714 aa16■□□□□ 0.15
TSC2-212ENST00000471143 TTC5Q8N0Z6 440 aa16■□□□□ 0.15
TSC2-212ENST00000471143 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
TSC2-212ENST00000471143 HTATSF1O43719 755 aaKnown RBP15.99■□□□□ 0.15
TSC2-212ENST00000471143 RTF1Q92541 710 aaKnown RBP15.99■□□□□ 0.15
TSC2-212ENST00000471143 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
TSC2-212ENST00000471143 UTRNP46939 3433 aa15.98■□□□□ 0.15
TSC2-212ENST00000471143 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
TSC2-212ENST00000471143 MCM10Q7L590 875 aa15.98■□□□□ 0.15
TSC2-212ENST00000471143 PELP1Q8IZL8 1130 aaKnown RBP15.98■□□□□ 0.15
TSC2-212ENST00000471143 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
TSC2-212ENST00000471143 ZNF831Q5JPB2 1677 aa15.98■□□□□ 0.15
TSC2-212ENST00000471143 KCNQ3O43525 872 aa15.97■□□□□ 0.15
TSC2-212ENST00000471143 YBX3P16989 372 aaKnown RBP eCLIP15.97■□□□□ 0.15
TSC2-212ENST00000471143 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
TSC2-212ENST00000471143 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
TSC2-212ENST00000471143 SOS1Q07889 1333 aaPredicted RBP15.96■□□□□ 0.15
TSC2-212ENST00000471143 USP42Q9H9J4 1324 aaKnown RBP15.96■□□□□ 0.15
TSC2-212ENST00000471143 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
TSC2-212ENST00000471143 SCN11AQ9UI33 1791 aa15.96■□□□□ 0.15
TSC2-212ENST00000471143 KCPQ6ZWJ8 1503 aa15.96■□□□□ 0.15
TSC2-212ENST00000471143 STARD3NLO95772 234 aa15.96■□□□□ 0.15
TSC2-212ENST00000471143 FKBP8Q14318 412 aa15.96■□□□□ 0.15
TSC2-212ENST00000471143 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
TSC2-212ENST00000471143 TEX13AQ9BXU3 409 aaPredicted RBP15.96■□□□□ 0.15
TSC2-212ENST00000471143 ZBTB1Q9Y2K1 713 aa15.96■□□□□ 0.15
TSC2-212ENST00000471143 GOLGB1Q14789 3259 aaKnown RBP15.95■□□□□ 0.14
TSC2-212ENST00000471143 NEFMP07197 916 aa15.95■□□□□ 0.14
TSC2-212ENST00000471143 PNNQ9H307 717 aaKnown RBP15.95■□□□□ 0.14
TSC2-212ENST00000471143 HEG1Q9ULI3 1381 aa15.95■□□□□ 0.14
TSC2-212ENST00000471143 GRIN3BO60391 1043 aa15.94■□□□□ 0.14
TSC2-212ENST00000471143 ZPR1O75312 459 aa15.94■□□□□ 0.14
TSC2-212ENST00000471143 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
TSC2-212ENST00000471143 TM4SF1P30408 202 aa15.94■□□□□ 0.14
TSC2-212ENST00000471143 ZEB1P37275 1124 aaPredicted RBP15.94■□□□□ 0.14
TSC2-212ENST00000471143 EIF5P55010 431 aaKnown RBP15.94■□□□□ 0.14
TSC2-212ENST00000471143 USPL1Q5W0Q7 1092 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms