RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.26
NPHP4-207ENST00000470763 FKBP5Q13451 457 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-207ENST00000470763 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
NPHP4-207ENST00000470763 ADGRB3O60242 1522 aa16.67■□□□□ 0.26
NPHP4-207ENST00000470763 STK26Q9P289 416 aa16.67■□□□□ 0.26
NPHP4-207ENST00000470763 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
NPHP4-207ENST00000470763 FCHSD2O94868 740 aa16.67■□□□□ 0.26
NPHP4-207ENST00000470763 API5Q9BZZ5 524 aaKnown RBP16.67■□□□□ 0.26
NPHP4-207ENST00000470763 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
NPHP4-207ENST00000470763 PHF14O94880 888 aa16.66■□□□□ 0.26
NPHP4-207ENST00000470763 TSHZ3Q63HK5 1081 aa16.66■□□□□ 0.26
NPHP4-207ENST00000470763 PALD1Q9ULE6 856 aa16.66■□□□□ 0.26
NPHP4-207ENST00000470763 KIF20AO95235 890 aa16.65■□□□□ 0.26
NPHP4-207ENST00000470763 GNAI1P63096 354 aa16.65■□□□□ 0.26
NPHP4-207ENST00000470763 RIOK3O14730 519 aaKnown RBP16.65■□□□□ 0.26
NPHP4-207ENST00000470763 KRT24Q2M2I5 525 aa16.65■□□□□ 0.26
NPHP4-207ENST00000470763 ANKRD44Q8N8A2 993 aa16.65■□□□□ 0.26
NPHP4-207ENST00000470763 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
NPHP4-207ENST00000470763 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
NPHP4-207ENST00000470763 UPF3BQ9BZI7 483 aaKnown RBP16.64■□□□□ 0.25
NPHP4-207ENST00000470763 CPS1P31327 1500 aa16.64■□□□□ 0.25
NPHP4-207ENST00000470763 LETM1O95202 739 aaPredicted RBP16.64■□□□□ 0.25
NPHP4-207ENST00000470763 CEP85Q6P2H3 762 aa16.64■□□□□ 0.25
NPHP4-207ENST00000470763 EID1Q9Y6B2 187 aa16.64■□□□□ 0.25
NPHP4-207ENST00000470763 FAM184AQ8NB25 1140 aa16.63■□□□□ 0.25
NPHP4-207ENST00000470763 SPTLC3Q9NUV7 552 aa16.63■□□□□ 0.25
NPHP4-207ENST00000470763 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
NPHP4-207ENST00000470763 FAM83GA6ND36 823 aa16.63■□□□□ 0.25
NPHP4-207ENST00000470763 PYCARDQ9ULZ3 195 aa16.63■□□□□ 0.25
NPHP4-207ENST00000470763 ATP10DQ9P241 1426 aa16.63■□□□□ 0.25
NPHP4-207ENST00000470763 FAM135BQ49AJ0 1406 aa16.63■□□□□ 0.25
NPHP4-207ENST00000470763 PPLO60437 1756 aa16.62■□□□□ 0.25
NPHP4-207ENST00000470763 UVSSAQ2YD98 709 aa16.62■□□□□ 0.25
NPHP4-207ENST00000470763 SPC24Q8NBT2 197 aa16.62■□□□□ 0.25
NPHP4-207ENST00000470763 IFT57Q9NWB7 429 aa16.62■□□□□ 0.25
NPHP4-207ENST00000470763 CUL4AQ13619 759 aa16.62■□□□□ 0.25
NPHP4-207ENST00000470763 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
NPHP4-207ENST00000470763 BBXQ8WY36 941 aaPredicted RBP16.62■□□□□ 0.25
NPHP4-207ENST00000470763 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
NPHP4-207ENST00000470763 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
NPHP4-207ENST00000470763 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
NPHP4-207ENST00000470763 ARHGEF28Q8N1W1 1705 aaKnown RBP16.61■□□□□ 0.25
NPHP4-207ENST00000470763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.61■□□□□ 0.25
NPHP4-207ENST00000470763 MEIS3Q99687 375 aa16.61■□□□□ 0.25
NPHP4-207ENST00000470763 KCNF1Q9H3M0 494 aa16.61■□□□□ 0.25
NPHP4-207ENST00000470763 CHAF1AQ13111 956 aaPredicted RBP16.6■□□□□ 0.25
NPHP4-207ENST00000470763 CCDC183Q5T5S1 534 aa16.6■□□□□ 0.25
NPHP4-207ENST00000470763 ANO2Q9NQ90 1003 aa16.6■□□□□ 0.25
NPHP4-207ENST00000470763 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
NPHP4-207ENST00000470763 PUS7Q96PZ0 661 aaKnown RBP16.6■□□□□ 0.25
NPHP4-207ENST00000470763 UBAP1LF5GYI3 381 aa16.59■□□□□ 0.25
NPHP4-207ENST00000470763 AP5Z1O43299 807 aa16.59■□□□□ 0.25
NPHP4-207ENST00000470763 KDM4AO75164 1064 aa16.59■□□□□ 0.25
NPHP4-207ENST00000470763 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
NPHP4-207ENST00000470763 MSH6P52701 1360 aa16.59■□□□□ 0.25
NPHP4-207ENST00000470763 PNPLA6Q8IY17 1366 aa16.59■□□□□ 0.25
NPHP4-207ENST00000470763 ZNF853P0CG23 659 aa16.59■□□□□ 0.25
NPHP4-207ENST00000470763 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-207ENST00000470763 KIAA1524Q8TCG1 905 aa16.59■□□□□ 0.25
NPHP4-207ENST00000470763 MCM2P49736 904 aa16.59■□□□□ 0.25
NPHP4-207ENST00000470763 PDE1AP54750 535 aa16.58■□□□□ 0.24
NPHP4-207ENST00000470763 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
NPHP4-207ENST00000470763 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
NPHP4-207ENST00000470763 DTNBO60941 627 aa16.58■□□□□ 0.24
NPHP4-207ENST00000470763 MX1P20591 662 aa16.57■□□□□ 0.24
NPHP4-207ENST00000470763 ZNF771Q7L3S4 317 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-207ENST00000470763 ANKRD7Q92527 254 aa16.57■□□□□ 0.24
NPHP4-207ENST00000470763 INTS4Q96HW7 963 aaKnown RBP16.57■□□□□ 0.24
NPHP4-207ENST00000470763 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-207ENST00000470763 RTL1A6NKG5 1358 aa16.57■□□□□ 0.24
NPHP4-207ENST00000470763 WDR33Q9C0J8 1336 aaKnown RBP16.57■□□□□ 0.24
NPHP4-207ENST00000470763 SLC26A8Q96RN1 970 aa16.57■□□□□ 0.24
NPHP4-207ENST00000470763 ESYT1Q9BSJ8 1104 aa16.57■□□□□ 0.24
NPHP4-207ENST00000470763 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
NPHP4-207ENST00000470763 FIBPO43427 364 aa16.57■□□□□ 0.24
NPHP4-207ENST00000470763 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
NPHP4-207ENST00000470763 CGNQ9P2M7 1197 aaKnown RBP16.57■□□□□ 0.24
NPHP4-207ENST00000470763 RIMS2Q9UQ26 1411 aa16.56■□□□□ 0.24
NPHP4-207ENST00000470763 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
NPHP4-207ENST00000470763 MCCP23508 829 aa16.56■□□□□ 0.24
NPHP4-207ENST00000470763 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
NPHP4-207ENST00000470763 GTF2E1P29083 439 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-207ENST00000470763 EXOC6BQ9Y2D4 811 aa16.55■□□□□ 0.24
NPHP4-207ENST00000470763 TRIM6-TRIM34B2RNG4 842 aa16.55■□□□□ 0.24
NPHP4-207ENST00000470763 EMILIN1Q9Y6C2 1016 aa16.55■□□□□ 0.24
NPHP4-207ENST00000470763 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
NPHP4-207ENST00000470763 CD163L1Q9NR16 1453 aa16.54■□□□□ 0.24
NPHP4-207ENST00000470763 ZBTB22O15209 634 aa16.54■□□□□ 0.24
NPHP4-207ENST00000470763 HDGFL2Q7Z4V5 671 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-207ENST00000470763 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
NPHP4-207ENST00000470763 CABP1Q9NZU7 370 aa16.54■□□□□ 0.24
NPHP4-207ENST00000470763 KIF24Q5T7B8 1368 aa16.53■□□□□ 0.24
NPHP4-207ENST00000470763 RPAP1Q9BWH6 1393 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-207ENST00000470763 PLEKHG1Q9ULL1 1385 aa16.53■□□□□ 0.24
NPHP4-207ENST00000470763 NCBP1Q09161 790 aaKnown RBP16.53■□□□□ 0.24
NPHP4-207ENST00000470763 NAA30Q147X3 362 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-207ENST00000470763 CTIFO43310 598 aaKnown RBP16.52■□□□□ 0.24
NPHP4-207ENST00000470763 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.24
NPHP4-207ENST00000470763 RGS12O14924 1447 aa16.52■□□□□ 0.24
NPHP4-207ENST00000470763 SLC4A10Q6U841 1118 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms