RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 MRC1P22897 1456 aa16.59■□□□□ 0.25
SND1-209ENST00000470723 VIRMAQ69YN4 1812 aaKnown RBP16.59■□□□□ 0.25
SND1-209ENST00000470723 TEFQ10587 303 aa16.57■□□□□ 0.24
SND1-209ENST00000470723 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
SND1-209ENST00000470723 SYTL4Q96C24 671 aaPredicted RBP16.57■□□□□ 0.24
SND1-209ENST00000470723 ATG3Q9NT62 314 aa16.57■□□□□ 0.24
SND1-209ENST00000470723 DOT1LQ8TEK3 1739 aa16.56■□□□□ 0.24
SND1-209ENST00000470723 CHL1O00533 1208 aa16.56■□□□□ 0.24
SND1-209ENST00000470723 APBA3O96018 575 aa16.56■□□□□ 0.24
SND1-209ENST00000470723 ZNF853P0CG23 659 aa16.56■□□□□ 0.24
SND1-209ENST00000470723 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
SND1-209ENST00000470723 CAMKK2Q96RR4 588 aa16.56■□□□□ 0.24
SND1-209ENST00000470723 ZNF521Q96K83 1311 aa16.55■□□□□ 0.24
SND1-209ENST00000470723 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
SND1-209ENST00000470723 PROM2Q8N271 834 aa16.55■□□□□ 0.24
SND1-209ENST00000470723 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
SND1-209ENST00000470723 ASAP1Q9ULH1 1129 aa16.55■□□□□ 0.24
SND1-209ENST00000470723 SIPA1L3O60292 1781 aaPredicted RBP16.55■□□□□ 0.24
SND1-209ENST00000470723 IL16Q14005 1332 aa16.54■□□□□ 0.24
SND1-209ENST00000470723 SF3B2Q13435 895 aaKnown RBP16.54■□□□□ 0.24
SND1-209ENST00000470723 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
SND1-209ENST00000470723 BTAF1O14981 1849 aa16.54■□□□□ 0.24
SND1-209ENST00000470723 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
SND1-209ENST00000470723 ZNF790Q6PG37 636 aa16.53■□□□□ 0.24
SND1-209ENST00000470723 TNS1Q9HBL0 1735 aaKnown RBP16.53■□□□□ 0.24
SND1-209ENST00000470723 BAG6P46379 1132 aa16.52■□□□□ 0.24
SND1-209ENST00000470723 IFT57Q9NWB7 429 aa16.52■□□□□ 0.24
SND1-209ENST00000470723 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
SND1-209ENST00000470723 SLC27A3Q5K4L6 730 aa16.51■□□□□ 0.23
SND1-209ENST00000470723 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
SND1-209ENST00000470723 GNAI1P63096 354 aa16.5■□□□□ 0.23
SND1-209ENST00000470723 EN1Q05925 392 aaPredicted RBP16.5■□□□□ 0.23
SND1-209ENST00000470723 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
SND1-209ENST00000470723 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
SND1-209ENST00000470723 HEG1Q9ULI3 1381 aa16.5■□□□□ 0.23
SND1-209ENST00000470723 LOC102724428A0A0B4J2F2 783 aa16.49■□□□□ 0.23
SND1-209ENST00000470723 KCNQ3O43525 872 aa16.49■□□□□ 0.23
SND1-209ENST00000470723 SIK1P57059 783 aa16.49■□□□□ 0.23
SND1-209ENST00000470723 TXNRD1Q16881 649 aa16.49■□□□□ 0.23
SND1-209ENST00000470723 DEFB132Q7Z7B7 95 aa16.49■□□□□ 0.23
SND1-209ENST00000470723 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
SND1-209ENST00000470723 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
SND1-209ENST00000470723 PALLDQ8WX93 1383 aa16.49■□□□□ 0.23
SND1-209ENST00000470723 RGPD3A6NKT7 1758 aaPredicted RBP16.49■□□□□ 0.23
SND1-209ENST00000470723 RGPD4Q7Z3J3 1758 aa16.49■□□□□ 0.23
SND1-209ENST00000470723 LY75O60449 1722 aa16.48■□□□□ 0.23
SND1-209ENST00000470723 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
SND1-209ENST00000470723 EZH2Q15910 746 aaKnown RBP16.48■□□□□ 0.23
SND1-209ENST00000470723 SENP3-EIF4A1A0A087X0R7 540 aa16.47■□□□□ 0.23
SND1-209ENST00000470723 TRMT2AQ8IZ69 625 aaKnown RBP16.47■□□□□ 0.23
SND1-209ENST00000470723 TTC5Q8N0Z6 440 aa16.47■□□□□ 0.23
SND1-209ENST00000470723 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
SND1-209ENST00000470723 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
SND1-209ENST00000470723 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
SND1-209ENST00000470723 ZNF831Q5JPB2 1677 aa16.46■□□□□ 0.23
SND1-209ENST00000470723 PAPPAQ13219 1627 aa16.46■□□□□ 0.23
SND1-209ENST00000470723 TEX13AQ9BXU3 409 aaPredicted RBP16.46■□□□□ 0.23
SND1-209ENST00000470723 MBIPQ9NS73 344 aa16.46■□□□□ 0.23
SND1-209ENST00000470723 TSPYL4Q9UJ04 414 aa16.46■□□□□ 0.23
SND1-209ENST00000470723 PTCD1O75127 700 aaKnown RBP16.45■□□□□ 0.22
SND1-209ENST00000470723 HNRNPUQ00839 825 aaKnown RBP eCLIP16.45■□□□□ 0.225e-6■□□□□ 10.1
SND1-209ENST00000470723 GOLGA2Q08379 1002 aa16.45■□□□□ 0.22
SND1-209ENST00000470723 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
SND1-209ENST00000470723 UBR2Q8IWV8 1755 aa16.45■□□□□ 0.22
SND1-209ENST00000470723 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
SND1-209ENST00000470723 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
SND1-209ENST00000470723 GIGYF1O75420 1035 aaPredicted RBP16.44■□□□□ 0.22
SND1-209ENST00000470723 SNRPA1P09661 255 aaKnown RBP16.44■□□□□ 0.22
SND1-209ENST00000470723 ATP6V1AP38606 617 aa16.44■□□□□ 0.22
SND1-209ENST00000470723 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
SND1-209ENST00000470723 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
SND1-209ENST00000470723 CCNL1Q9UK58 526 aaPredicted RBP16.44■□□□□ 0.22
SND1-209ENST00000470723 ITPK1Q13572 414 aa16.43■□□□□ 0.22
SND1-209ENST00000470723 RC3H1Q5TC82 1133 aaKnown RBP16.43■□□□□ 0.22
SND1-209ENST00000470723 LAS1LQ9Y4W2 734 aaKnown RBP16.43■□□□□ 0.22
SND1-209ENST00000470723 ZBED9Q6R2W3 1325 aa16.43■□□□□ 0.22
SND1-209ENST00000470723 E9PSI1 815 aa16.42■□□□□ 0.22
SND1-209ENST00000470723 HOXB7P09629 217 aa16.41■□□□□ 0.22
SND1-209ENST00000470723 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
SND1-209ENST00000470723 MYH16Q9H6N6 1097 aa16.41■□□□□ 0.22
SND1-209ENST00000470723 SOS1Q07889 1333 aaPredicted RBP16.41■□□□□ 0.22
SND1-209ENST00000470723 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
SND1-209ENST00000470723 KCNQ4P56696 695 aa16.4■□□□□ 0.22
SND1-209ENST00000470723 DNAJC10Q8IXB1 793 aa16.4■□□□□ 0.22
SND1-209ENST00000470723 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
SND1-209ENST00000470723 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
SND1-209ENST00000470723 STARD3NLO95772 234 aa16.39■□□□□ 0.21
SND1-209ENST00000470723 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
SND1-209ENST00000470723 CDCA7LQ96GN5 454 aa16.39■□□□□ 0.21
SND1-209ENST00000470723 RREB1Q92766 1687 aa16.39■□□□□ 0.21
SND1-209ENST00000470723 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
SND1-209ENST00000470723 INTS5Q6P9B9 1019 aaKnown RBP16.38■□□□□ 0.21
SND1-209ENST00000470723 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
SND1-209ENST00000470723 TSR2Q969E8 191 aaKnown RBP16.38■□□□□ 0.21
SND1-209ENST00000470723 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
SND1-209ENST00000470723 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
SND1-209ENST00000470723 PRAMEF22A3QJZ6 481 aa16.37■□□□□ 0.21
SND1-209ENST00000470723 YY1P25490 414 aa16.37■□□□□ 0.21
SND1-209ENST00000470723 NBPF14Q5TI25 921 aa16.37■□□□□ 0.21
SND1-209ENST00000470723 DUSP27Q5VZP5 1158 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms