RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 LOC102724428A0A0B4J2F2 783 aa9.56□□□□□ -0.88
SF3A3-205ENST00000470585 CYP27B1O15528 508 aa9.56□□□□□ -0.88
SF3A3-205ENST00000470585 SIK1P57059 783 aa9.56□□□□□ -0.88
SF3A3-205ENST00000470585 NLGN1Q8N2Q7 840 aa9.56□□□□□ -0.88
SF3A3-205ENST00000470585 ZNF526Q8TF50 670 aaPredicted RBP9.56□□□□□ -0.88
SF3A3-205ENST00000470585 SPG7Q9UQ90 795 aa9.56□□□□□ -0.88
SF3A3-205ENST00000470585 WDR90Q96KV7 1748 aa9.56□□□□□ -0.88
SF3A3-205ENST00000470585 TONSLQ96HA7 1378 aa9.55□□□□□ -0.88
SF3A3-205ENST00000470585 ARFGEF1Q9Y6D6 1849 aa9.55□□□□□ -0.88
SF3A3-205ENST00000470585 RC3H1Q5TC82 1133 aaKnown RBP9.55□□□□□ -0.88
SF3A3-205ENST00000470585 MPRIPQ6WCQ1 1025 aa9.55□□□□□ -0.88
SF3A3-205ENST00000470585 KLRG1Q96E93 195 aa9.55□□□□□ -0.88
SF3A3-205ENST00000470585 TESK2Q96S53 571 aa9.55□□□□□ -0.88
SF3A3-205ENST00000470585 KIAA1551Q9HCM1 1747 aa9.54□□□□□ -0.88
SF3A3-205ENST00000470585 BRCA1P38398 1863 aaKnown RBP9.54□□□□□ -0.88
SF3A3-205ENST00000470585 FYB1O15117 783 aa9.54□□□□□ -0.88
SF3A3-205ENST00000470585 MYCNP04198 464 aaPredicted RBP9.54□□□□□ -0.88
SF3A3-205ENST00000470585 CDCA8Q53HL2 280 aa9.54□□□□□ -0.88
SF3A3-205ENST00000470585 PIGBQ92521 554 aa9.54□□□□□ -0.88
SF3A3-205ENST00000470585 KDM2BQ8NHM5 1336 aa9.54□□□□□ -0.88
SF3A3-205ENST00000470585 ANKRD26Q9UPS8 1709 aa9.53□□□□□ -0.88
SF3A3-205ENST00000470585 MMP10P09238 476 aa9.53□□□□□ -0.88
SF3A3-205ENST00000470585 TMF1P82094 1093 aa9.53□□□□□ -0.88
SF3A3-205ENST00000470585 C16orf71Q8IYS4 520 aaPredicted RBP9.53□□□□□ -0.88
SF3A3-205ENST00000470585 CCDC87Q9NVE4 849 aa9.53□□□□□ -0.88
SF3A3-205ENST00000470585 TMOD3Q9NYL9 352 aa9.53□□□□□ -0.88
SF3A3-205ENST00000470585 KDRP35968 1356 aa9.52□□□□□ -0.88
SF3A3-205ENST00000470585 TNRC6CQ9HCJ0 1690 aaKnown RBP9.52□□□□□ -0.89
SF3A3-205ENST00000470585 GNPATO15228 680 aa9.52□□□□□ -0.89
SF3A3-205ENST00000470585 PHF14O94880 888 aa9.52□□□□□ -0.89
SF3A3-205ENST00000470585 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.89
SF3A3-205ENST00000470585 AMIGO3Q86WK7 504 aa9.52□□□□□ -0.89
SF3A3-205ENST00000470585 LINC00116Q8NCU8 138 aa9.52□□□□□ -0.89
SF3A3-205ENST00000470585 SP7Q8TDD2 431 aaPredicted RBP9.52□□□□□ -0.89
SF3A3-205ENST00000470585 SIN3AQ96ST3 1273 aa9.52□□□□□ -0.89
SF3A3-205ENST00000470585 RTCBQ9Y3I0 505 aaKnown RBP9.52□□□□□ -0.89
SF3A3-205ENST00000470585 CNTNAP4Q9C0A0 1308 aa9.52□□□□□ -0.89
SF3A3-205ENST00000470585 KIF20BQ96Q89 1820 aa9.52□□□□□ -0.89
SF3A3-205ENST00000470585 C4AP0C0L4 1744 aa9.51□□□□□ -0.89
SF3A3-205ENST00000470585 PRELPP51888 382 aa9.51□□□□□ -0.89
SF3A3-205ENST00000470585 HSP90AB2PQ58FF8 381 aa9.51□□□□□ -0.89
SF3A3-205ENST00000470585 TRAPPC3LQ5T215 181 aa9.51□□□□□ -0.89
SF3A3-205ENST00000470585 IFNL2Q8IZJ0 200 aa9.51□□□□□ -0.89
SF3A3-205ENST00000470585 ERVV-2B6SEH9 535 aa9.5□□□□□ -0.89
SF3A3-205ENST00000470585 HSP90AB1P08238 724 aaKnown RBP9.5□□□□□ -0.89
SF3A3-205ENST00000470585 ATP6V1AP38606 617 aa9.5□□□□□ -0.89
SF3A3-205ENST00000470585 NEUROD1Q13562 356 aa9.5□□□□□ -0.89
SF3A3-205ENST00000470585 USHBP1Q8N6Y0 703 aa9.5□□□□□ -0.89
SF3A3-205ENST00000470585 SMC1BQ8NDV3 1235 aa9.5□□□□□ -0.89
SF3A3-205ENST00000470585 DCAF5Q96JK2 942 aa9.5□□□□□ -0.89
SF3A3-205ENST00000470585 BCS1LQ9Y276 419 aa9.5□□□□□ -0.89
SF3A3-205ENST00000470585 WASHC2AQ641Q2 1341 aa9.5□□□□□ -0.89
SF3A3-205ENST00000470585 ST20-MTHFSA0A0A6YYL1 179 aa9.49□□□□□ -0.89
SF3A3-205ENST00000470585 RPS6KA4O75676 772 aa9.49□□□□□ -0.89
SF3A3-205ENST00000470585 FCHSD2O94868 740 aa9.49□□□□□ -0.89
SF3A3-205ENST00000470585 ARHGAP27Q6ZUM4 889 aa9.49□□□□□ -0.89
SF3A3-205ENST00000470585 GGNBP2Q9H3C7 697 aa9.49□□□□□ -0.89
SF3A3-205ENST00000470585 NMRK2Q9NPI5 230 aa9.49□□□□□ -0.89
SF3A3-205ENST00000470585 PIM2Q9P1W9 311 aa9.49□□□□□ -0.89
SF3A3-205ENST00000470585 PARP3Q9Y6F1 533 aa9.49□□□□□ -0.89
SF3A3-205ENST00000470585 N4BP2Q86UW6 1770 aaPredicted RBP9.49□□□□□ -0.89
SF3A3-205ENST00000470585 COL5A3P25940 1745 aaPredicted RBP9.48□□□□□ -0.89
SF3A3-205ENST00000470585 PCNTO95613 3336 aa9.48□□□□□ -0.89
SF3A3-205ENST00000470585 GYS1P13807 737 aa9.48□□□□□ -0.89
SF3A3-205ENST00000470585 PHKG2P15735 406 aa9.48□□□□□ -0.89
SF3A3-205ENST00000470585 ITPK1Q13572 414 aa9.48□□□□□ -0.89
SF3A3-205ENST00000470585 C9orf131Q5VYM1 1079 aa9.48□□□□□ -0.89
SF3A3-205ENST00000470585 ATG3Q9NT62 314 aa9.48□□□□□ -0.89
SF3A3-205ENST00000470585 ASAP1Q9ULH1 1129 aa9.48□□□□□ -0.89
SF3A3-205ENST00000470585 KDM6AO15550 1401 aaPredicted RBP9.48□□□□□ -0.89
SF3A3-205ENST00000470585 A0A0G2JLW4 131 aa9.47□□□□□ -0.89
SF3A3-205ENST00000470585 DPEP1P16444 411 aa9.47□□□□□ -0.89
SF3A3-205ENST00000470585 KCNA3P22001 575 aa9.47□□□□□ -0.89
SF3A3-205ENST00000470585 FBLN1P23142 703 aa9.47□□□□□ -0.89
SF3A3-205ENST00000470585 RFC4P35249 363 aa9.47□□□□□ -0.89
SF3A3-205ENST00000470585 DALRD3Q5D0E6 543 aaKnown RBP9.47□□□□□ -0.89
SF3A3-205ENST00000470585 COL13A1Q5TAT6 717 aaPredicted RBP9.47□□□□□ -0.89
SF3A3-205ENST00000470585 TNS4Q8IZW8 715 aa9.47□□□□□ -0.89
SF3A3-205ENST00000470585 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
SF3A3-205ENST00000470585 SBF1O95248 1867 aa9.46□□□□□ -0.9
SF3A3-205ENST00000470585 AMOTQ4VCS5 1084 aa9.45□□□□□ -0.9
SF3A3-205ENST00000470585 EYA1Q99502 592 aa9.45□□□□□ -0.9
SF3A3-205ENST00000470585 MYH14Q7Z406 1995 aaKnown RBP9.44□□□□□ -0.9
SF3A3-205ENST00000470585 VEGFAP15692 232 aaPredicted RBP9.44□□□□□ -0.9
SF3A3-205ENST00000470585 RNF181Q9P0P0 153 aa9.44□□□□□ -0.9
SF3A3-205ENST00000470585 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
SF3A3-205ENST00000470585 USP42Q9H9J4 1324 aaKnown RBP9.44□□□□□ -0.9
SF3A3-205ENST00000470585 KCPQ6ZWJ8 1503 aa9.44□□□□□ -0.9
SF3A3-205ENST00000470585 GLTPD2A6NH11 291 aa9.43□□□□□ -0.9
SF3A3-205ENST00000470585 LMNB1P20700 586 aa9.43□□□□□ -0.9
SF3A3-205ENST00000470585 WWC3Q9ULE0 1092 aa9.43□□□□□ -0.9
SF3A3-205ENST00000470585 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
SF3A3-205ENST00000470585 PLEKHO1Q53GL0 409 aaPredicted RBP9.42□□□□□ -0.9
SF3A3-205ENST00000470585 REM2Q8IYK8 340 aaPredicted RBP9.42□□□□□ -0.9
SF3A3-205ENST00000470585 PIP4P2Q8N4L2 257 aa9.42□□□□□ -0.9
SF3A3-205ENST00000470585 SLC4A9Q96Q91 983 aa9.42□□□□□ -0.9
SF3A3-205ENST00000470585 TM4SF1P30408 202 aa9.41□□□□□ -0.9
SF3A3-205ENST00000470585 CRKLP46109 303 aaKnown RBP9.41□□□□□ -0.9
SF3A3-205ENST00000470585 SMIM5Q71RC9 77 aa9.41□□□□□ -0.9
SF3A3-205ENST00000470585 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms