RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 SIRT1Q96EB6 747 aa7.42□□□□□ -1.22
SRRM1-208ENST00000470243 STAU1O95793 577 aaKnown RBP7.41□□□□□ -1.22
SRRM1-208ENST00000470243 KCNA1Q09470 495 aa7.41□□□□□ -1.22
SRRM1-208ENST00000470243 CC2D2BQ6DHV5 1058 aa7.41□□□□□ -1.22
SRRM1-208ENST00000470243 CCDC116Q8IYX3 515 aa7.41□□□□□ -1.22
SRRM1-208ENST00000470243 MPNDQ8N594 471 aa7.41□□□□□ -1.22
SRRM1-208ENST00000470243 UNC13AQ9UPW8 1703 aa7.41□□□□□ -1.22
SRRM1-208ENST00000470243 LGR5O75473 907 aa7.4□□□□□ -1.22
SRRM1-208ENST00000470243 SEC13P55735 322 aa7.4□□□□□ -1.22
SRRM1-208ENST00000470243 SUZ12Q15022 739 aaKnown RBP7.4□□□□□ -1.22
SRRM1-208ENST00000470243 PPP1R26Q5T8A7 1209 aaPredicted RBP7.4□□□□□ -1.22
SRRM1-208ENST00000470243 PHLDB3Q6NSJ2 640 aa7.4□□□□□ -1.22
SRRM1-208ENST00000470243 CLP1Q92989 425 aaKnown RBP7.4□□□□□ -1.22
SRRM1-208ENST00000470243 PURBQ96QR8 312 aaKnown RBP7.4□□□□□ -1.22
SRRM1-208ENST00000470243 OSBPL3Q9H4L5 887 aa7.4□□□□□ -1.22
SRRM1-208ENST00000470243 DHX9Q08211 1270 aaKnown RBP7.39□□□□□ -1.23
SRRM1-208ENST00000470243 NR5A1Q13285 461 aa7.39□□□□□ -1.23
SRRM1-208ENST00000470243 GZF1Q9H116 711 aaPredicted RBP7.39□□□□□ -1.23
SRRM1-208ENST00000470243 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
SRRM1-208ENST00000470243 IVNS1ABPQ9Y6Y0 642 aa7.39□□□□□ -1.23
SRRM1-208ENST00000470243 PRMT3O60678 531 aa7.38□□□□□ -1.23
SRRM1-208ENST00000470243 LILRA1O75019 489 aa7.38□□□□□ -1.23
SRRM1-208ENST00000470243 ATP2B4P23634 1241 aa7.38□□□□□ -1.23
SRRM1-208ENST00000470243 NNTQ13423 1086 aa7.38□□□□□ -1.23
SRRM1-208ENST00000470243 SWI5Q1ZZU3 235 aa7.38□□□□□ -1.23
SRRM1-208ENST00000470243 B4GALNT3Q6L9W6 998 aa7.38□□□□□ -1.23
SRRM1-208ENST00000470243 MRPL14Q6P1L8 145 aaKnown RBP7.38□□□□□ -1.23
SRRM1-208ENST00000470243 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.38□□□□□ -1.23
SRRM1-208ENST00000470243 ZNF358Q9NW07 568 aa7.38□□□□□ -1.23
SRRM1-208ENST00000470243 TMEM229AB2RXF0 380 aa7.37□□□□□ -1.23
SRRM1-208ENST00000470243 PATL2C9JE40 543 aaKnown RBP7.37□□□□□ -1.23
SRRM1-208ENST00000470243 SCNN1AP37088 669 aa7.37□□□□□ -1.23
SRRM1-208ENST00000470243 SCNN1DP51172 638 aa7.37□□□□□ -1.23
SRRM1-208ENST00000470243 SCARF1Q14162 830 aa7.37□□□□□ -1.23
SRRM1-208ENST00000470243 TSEN2Q8NCE0 465 aaKnown RBP7.37□□□□□ -1.23
SRRM1-208ENST00000470243 ESF1Q9H501 851 aaKnown RBP7.37□□□□□ -1.23
SRRM1-208ENST00000470243 SSFA2P28290 1259 aa7.36□□□□□ -1.23
SRRM1-208ENST00000470243 GDF10P55107 478 aa7.36□□□□□ -1.23
SRRM1-208ENST00000470243 PRIMPOLQ96LW4 560 aa7.36□□□□□ -1.23
SRRM1-208ENST00000470243 ADD1P35611 737 aaKnown RBP7.35□□□□□ -1.23
SRRM1-208ENST00000470243 WDR4P57081 412 aaKnown RBP7.35□□□□□ -1.23
SRRM1-208ENST00000470243 OCLNQ16625 522 aa7.35□□□□□ -1.23
SRRM1-208ENST00000470243 HINFPQ9BQA5 517 aa7.35□□□□□ -1.23
SRRM1-208ENST00000470243 ETNK1Q9HBU6 452 aa7.35□□□□□ -1.23
SRRM1-208ENST00000470243 RAB6BQ9NRW1 208 aa7.35□□□□□ -1.23
SRRM1-208ENST00000470243 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
SRRM1-208ENST00000470243 TIMP2P16035 220 aa7.34□□□□□ -1.23
SRRM1-208ENST00000470243 CYP2U1Q7Z449 544 aa7.34□□□□□ -1.23
SRRM1-208ENST00000470243 GAS2L2Q8NHY3 880 aa7.34□□□□□ -1.23
SRRM1-208ENST00000470243 SERTAD1Q9UHV2 236 aa7.34□□□□□ -1.23
SRRM1-208ENST00000470243 EMILIN1Q9Y6C2 1016 aa7.34□□□□□ -1.23
SRRM1-208ENST00000470243 CBLBQ13191 982 aa7.33□□□□□ -1.24
SRRM1-208ENST00000470243 TXNDC2Q86VQ3 553 aa7.33□□□□□ -1.24
SRRM1-208ENST00000470243 ARHGEF10LQ9HCE6 1279 aa7.33□□□□□ -1.24
SRRM1-208ENST00000470243 CXXC1Q9P0U4 656 aaPredicted RBP7.33□□□□□ -1.24
SRRM1-208ENST00000470243 GNEQ9Y223 722 aaKnown RBP7.33□□□□□ -1.24
SRRM1-208ENST00000470243 CCDC9Q9Y3X0 531 aaKnown RBP7.33□□□□□ -1.24
SRRM1-208ENST00000470243 RB1CC1Q8TDY2 1594 aa7.33□□□□□ -1.24
SRRM1-208ENST00000470243 M0R2N6 131 aa7.32□□□□□ -1.24
SRRM1-208ENST00000470243 INHAP05111 366 aa7.32□□□□□ -1.24
SRRM1-208ENST00000470243 VSIG8P0DPA2 414 aa7.32□□□□□ -1.24
SRRM1-208ENST00000470243 C6orf118Q5T5N4 469 aa7.32□□□□□ -1.24
SRRM1-208ENST00000470243 TMCO4Q5TGY1 634 aa7.32□□□□□ -1.24
SRRM1-208ENST00000470243 ITPKCQ96DU7 683 aa7.32□□□□□ -1.24
SRRM1-208ENST00000470243 ZFAND3Q9H8U3 227 aa7.32□□□□□ -1.24
SRRM1-208ENST00000470243 WASLO00401 505 aaPredicted RBP7.31□□□□□ -1.24
SRRM1-208ENST00000470243 MAN1A2O60476 641 aa7.31□□□□□ -1.24
SRRM1-208ENST00000470243 ZIC2O95409 532 aaPredicted RBP7.31□□□□□ -1.24
SRRM1-208ENST00000470243 ADH1AP07327 375 aa7.31□□□□□ -1.24
SRRM1-208ENST00000470243 SERPINB4P48594 390 aa7.31□□□□□ -1.24
SRRM1-208ENST00000470243 TNS4Q8IZW8 715 aa7.31□□□□□ -1.24
SRRM1-208ENST00000470243 MKNK1Q9BUB5 465 aa7.31□□□□□ -1.24
SRRM1-208ENST00000470243 GNRH1P01148 92 aa7.3□□□□□ -1.24
SRRM1-208ENST00000470243 IL2RAP01589 272 aa7.3□□□□□ -1.24
SRRM1-208ENST00000470243 WEE1P30291 646 aa7.3□□□□□ -1.24
SRRM1-208ENST00000470243 GSK3AP49840 483 aa7.3□□□□□ -1.24
SRRM1-208ENST00000470243 EPHA4P54764 986 aa7.3□□□□□ -1.24
SRRM1-208ENST00000470243 KCNMA1Q12791 1236 aa7.3□□□□□ -1.24
SRRM1-208ENST00000470243 FKBP5Q13451 457 aaPredicted RBP7.3□□□□□ -1.24
SRRM1-208ENST00000470243 KDF1Q8NAX2 398 aaPredicted RBP7.3□□□□□ -1.24
SRRM1-208ENST00000470243 CCER1Q8TC90 406 aaPredicted RBP7.3□□□□□ -1.24
SRRM1-208ENST00000470243 TRIM52Q96A61 297 aa7.3□□□□□ -1.24
SRRM1-208ENST00000470243 KLF16Q9BXK1 252 aaPredicted RBP7.3□□□□□ -1.24
SRRM1-208ENST00000470243 PPFIA3O75145 1194 aa7.29□□□□□ -1.24
SRRM1-208ENST00000470243 TBCELQ5QJ74 424 aa7.29□□□□□ -1.24
SRRM1-208ENST00000470243 SND1Q7KZF4 910 aaKnown RBP eCLIP7.29□□□□□ -1.24
SRRM1-208ENST00000470243 C1orf216Q8TAB5 229 aa7.29□□□□□ -1.24
SRRM1-208ENST00000470243 AGBL1Q96MI9 1066 aa7.29□□□□□ -1.24
SRRM1-208ENST00000470243 TSPAN10Q9H1Z9 355 aaPredicted RBP7.29□□□□□ -1.24
SRRM1-208ENST00000470243 BACH1O14867 736 aa7.28□□□□□ -1.24
SRRM1-208ENST00000470243 ARID4AP29374 1257 aaPredicted RBP7.28□□□□□ -1.24
SRRM1-208ENST00000470243 MFAP1P55081 439 aaKnown RBP7.28□□□□□ -1.24
SRRM1-208ENST00000470243 ESCO1Q5FWF5 840 aa7.28□□□□□ -1.24
SRRM1-208ENST00000470243 CAPN12Q6ZSI9 719 aa7.28□□□□□ -1.24
SRRM1-208ENST00000470243 Q6ZVU0 165 aa7.28□□□□□ -1.24
SRRM1-208ENST00000470243 SCG3Q8WXD2 468 aaKnown RBP7.28□□□□□ -1.24
SRRM1-208ENST00000470243 C21orf2O43822 256 aa7.27□□□□□ -1.25
SRRM1-208ENST00000470243 RELBQ01201 579 aa7.27□□□□□ -1.25
SRRM1-208ENST00000470243 ZNF211Q13398 564 aaPredicted RBP7.27□□□□□ -1.25
SRRM1-208ENST00000470243 TLR1Q15399 786 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms