RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 NBPF14Q5TI25 921 aa23.7■■□□□ 1.38
LMNA-211ENST00000470199 MCM10Q7L590 875 aa23.7■■□□□ 1.38
LMNA-211ENST00000470199 PAPPAQ13219 1627 aa23.7■■□□□ 1.38
LMNA-211ENST00000470199 MRC1P22897 1456 aa23.69■■□□□ 1.38
LMNA-211ENST00000470199 SLC4A9Q96Q91 983 aa23.69■■□□□ 1.38
LMNA-211ENST00000470199 SLC39A6Q13433 755 aa23.68■■□□□ 1.38
LMNA-211ENST00000470199 NFE2L2Q16236 605 aa23.68■■□□□ 1.38
LMNA-211ENST00000470199 VIRMAQ69YN4 1812 aaKnown RBP23.68■■□□□ 1.38
LMNA-211ENST00000470199 MAPK8IP3Q9UPT6 1336 aa23.67■■□□□ 1.38
LMNA-211ENST00000470199 LOC102724428A0A0B4J2F2 783 aa23.67■■□□□ 1.38
LMNA-211ENST00000470199 SIK1P57059 783 aa23.67■■□□□ 1.38
LMNA-211ENST00000470199 PDGFDQ9GZP0 370 aaPredicted RBP23.67■■□□□ 1.38
LMNA-211ENST00000470199 MRS2Q9HD23 443 aa23.67■■□□□ 1.38
LMNA-211ENST00000470199 CEMIPQ8WUJ3 1361 aa23.66■■□□□ 1.38
LMNA-211ENST00000470199 NEFMP07197 916 aa23.66■■□□□ 1.38
LMNA-211ENST00000470199 ITPK1Q13572 414 aa23.66■■□□□ 1.38
LMNA-211ENST00000470199 SLC15A2Q16348 729 aa23.66■■□□□ 1.38
LMNA-211ENST00000470199 AKT1S1Q96B36 256 aa23.66■■□□□ 1.38
LMNA-211ENST00000470199 RBM42Q9BTD8 480 aaKnown RBP23.66■■□□□ 1.38
LMNA-211ENST00000470199 PNNQ9H307 717 aaKnown RBP23.66■■□□□ 1.38
LMNA-211ENST00000470199 STK32BQ9NY57 414 aa23.66■■□□□ 1.38
LMNA-211ENST00000470199 RRP7AQ9Y3A4 280 aaKnown RBP23.66■■□□□ 1.38
LMNA-211ENST00000470199 PTCD1O75127 700 aaKnown RBP23.65■■□□□ 1.38
LMNA-211ENST00000470199 PNISRQ8TF01 805 aaKnown RBP23.64■■□□□ 1.37
LMNA-211ENST00000470199 RUNDC1Q96C34 613 aa23.64■■□□□ 1.37
LMNA-211ENST00000470199 THUMPD2Q9BTF0 503 aaKnown RBP23.64■■□□□ 1.37
LMNA-211ENST00000470199 ATP6V1AP38606 617 aa23.63■■□□□ 1.37
LMNA-211ENST00000470199 TEFQ10587 303 aa23.63■■□□□ 1.37
LMNA-211ENST00000470199 LINC00116Q8NCU8 138 aa23.63■■□□□ 1.37
LMNA-211ENST00000470199 RTF1Q92541 710 aaKnown RBP23.63■■□□□ 1.37
LMNA-211ENST00000470199 TMPOP42166 694 aaKnown RBP23.62■■□□□ 1.37
LMNA-211ENST00000470199 DLG5Q8TDM6 1919 aa23.62■■□□□ 1.37
LMNA-211ENST00000470199 KCNQ3O43525 872 aa23.61■■□□□ 1.37
LMNA-211ENST00000470199 HTATSF1O43719 755 aaKnown RBP23.61■■□□□ 1.37
LMNA-211ENST00000470199 RIPK4P57078 832 aa23.61■■□□□ 1.37
LMNA-211ENST00000470199 SMIM5Q71RC9 77 aa23.61■■□□□ 1.37
LMNA-211ENST00000470199 SENP3-EIF4A1A0A087X0R7 540 aa23.6■■□□□ 1.37
LMNA-211ENST00000470199 NEUROD2Q15784 382 aa23.6■■□□□ 1.37
LMNA-211ENST00000470199 C5P01031 1676 aa23.6■■□□□ 1.37
LMNA-211ENST00000470199 SIPA1L3O60292 1781 aaPredicted RBP23.6■■□□□ 1.37
LMNA-211ENST00000470199 AMIGO3Q86WK7 504 aa23.59■■□□□ 1.37
LMNA-211ENST00000470199 TAF1LQ8IZX4 1826 aa23.58■■□□□ 1.37
LMNA-211ENST00000470199 KCPQ6ZWJ8 1503 aa23.58■■□□□ 1.36
LMNA-211ENST00000470199 MIS18AQ9NYP9 233 aa23.57■■□□□ 1.36
LMNA-211ENST00000470199 BTBD11A6QL63 1104 aa23.56■■□□□ 1.36
LMNA-211ENST00000470199 APAF1O14727 1248 aa23.56■■□□□ 1.36
LMNA-211ENST00000470199 ZNF790Q6PG37 636 aa23.56■■□□□ 1.36
LMNA-211ENST00000470199 TFCP2L1Q9NZI6 479 aa23.56■■□□□ 1.36
LMNA-211ENST00000470199 PNPLA7Q6ZV29 1317 aa23.56■■□□□ 1.36
LMNA-211ENST00000470199 C4BP0C0L5 1744 aa23.56■■□□□ 1.36
LMNA-211ENST00000470199 ZNF496Q96IT1 587 aaPredicted RBP23.55■■□□□ 1.36
LMNA-211ENST00000470199 TRIM35Q9UPQ4 493 aa23.55■■□□□ 1.36
LMNA-211ENST00000470199 TUBGCP6Q96RT7 1819 aa23.54■■□□□ 1.36
LMNA-211ENST00000470199 DNAJC10Q8IXB1 793 aa23.54■■□□□ 1.36
LMNA-211ENST00000470199 CASZ1Q86V15 1759 aa23.54■■□□□ 1.36
LMNA-211ENST00000470199 TAF7Q15545 349 aaPredicted RBP23.53■■□□□ 1.36
LMNA-211ENST00000470199 DIEXFQ68CQ4 756 aaKnown RBP23.53■■□□□ 1.36
LMNA-211ENST00000470199 TJP1Q07157 1748 aa23.53■■□□□ 1.36
LMNA-211ENST00000470199 ZBTB7AO95365 584 aa23.52■■□□□ 1.36
LMNA-211ENST00000470199 TTC5Q8N0Z6 440 aa23.52■■□□□ 1.36
LMNA-211ENST00000470199 AK7Q96M32 723 aa23.52■■□□□ 1.36
LMNA-211ENST00000470199 ZNF831Q5JPB2 1677 aa23.51■■□□□ 1.35
LMNA-211ENST00000470199 UBR2Q8IWV8 1755 aa23.51■■□□□ 1.35
LMNA-211ENST00000470199 COL23A1Q86Y22 540 aaPredicted RBP23.51■■□□□ 1.35
LMNA-211ENST00000470199 FAM9BQ8IZU0 186 aa23.51■■□□□ 1.35
LMNA-211ENST00000470199 PHF14O94880 888 aa23.5■■□□□ 1.35
LMNA-211ENST00000470199 COL5A3P25940 1745 aaPredicted RBP23.5■■□□□ 1.35
LMNA-211ENST00000470199 GNPATO15228 680 aa23.49■■□□□ 1.35
LMNA-211ENST00000470199 ATF5Q9Y2D1 282 aaPredicted RBP23.49■■□□□ 1.35
LMNA-211ENST00000470199 PRAMEF22A3QJZ6 481 aa23.48■■□□□ 1.35
LMNA-211ENST00000470199 CRKLP46109 303 aaKnown RBP23.48■■□□□ 1.35
LMNA-211ENST00000470199 HEG1Q9ULI3 1381 aa23.48■■□□□ 1.35
LMNA-211ENST00000470199 CYP19A1P11511 503 aaPredicted RBP23.47■■□□□ 1.35
LMNA-211ENST00000470199 LMOD3Q0VAK6 560 aa23.47■■□□□ 1.35
LMNA-211ENST00000470199 INTS5Q6P9B9 1019 aaKnown RBP23.47■■□□□ 1.35
LMNA-211ENST00000470199 CNTNAP4Q9C0A0 1308 aa23.47■■□□□ 1.35
LMNA-211ENST00000470199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.46■■□□□ 1.35
LMNA-211ENST00000470199 MSH5O43196 834 aa23.46■■□□□ 1.35
LMNA-211ENST00000470199 QSER1Q2KHR3 1735 aa23.46■■□□□ 1.35
LMNA-211ENST00000470199 RC3H1Q5TC82 1133 aaKnown RBP23.46■■□□□ 1.35
LMNA-211ENST00000470199 VSIG10Q8N0Z9 540 aa23.46■■□□□ 1.35
LMNA-211ENST00000470199 MIER1Q8N108 512 aa23.46■■□□□ 1.35
LMNA-211ENST00000470199 FMNL2Q96PY5 1086 aa23.46■■□□□ 1.35
LMNA-211ENST00000470199 CICQ96RK0 1608 aaPredicted RBP23.46■■□□□ 1.35
LMNA-211ENST00000470199 UBR3Q6ZT12 1888 aa23.45■■□□□ 1.35
LMNA-211ENST00000470199 MYH14Q7Z406 1995 aaKnown RBP23.45■■□□□ 1.34
LMNA-211ENST00000470199 RPS6KA4O75676 772 aa23.43■■□□□ 1.34
LMNA-211ENST00000470199 KDM3BQ7LBC6 1761 aa23.42■■□□□ 1.34
LMNA-211ENST00000470199 HMGB2P26583 209 aaKnown RBP23.42■■□□□ 1.34
LMNA-211ENST00000470199 SSFA2P28290 1259 aa23.42■■□□□ 1.34
LMNA-211ENST00000470199 EIF4A1P60842 406 aaKnown RBP23.42■■□□□ 1.34
LMNA-211ENST00000470199 SPON1Q9HCB6 807 aa23.42■■□□□ 1.34
LMNA-211ENST00000470199 CCDC87Q9NVE4 849 aa23.42■■□□□ 1.34
LMNA-211ENST00000470199 TSPYL4Q9UJ04 414 aa23.42■■□□□ 1.34
LMNA-211ENST00000470199 ZBTB1Q9Y2K1 713 aa23.42■■□□□ 1.34
LMNA-211ENST00000470199 RTCBQ9Y3I0 505 aaKnown RBP23.42■■□□□ 1.34
LMNA-211ENST00000470199 LAS1LQ9Y4W2 734 aaKnown RBP23.42■■□□□ 1.34
LMNA-211ENST00000470199 USP16Q9Y5T5 823 aa23.42■■□□□ 1.34
LMNA-211ENST00000470199 SRCAPQ6ZRS2 3230 aa23.42■■□□□ 1.34
LMNA-211ENST00000470199 PTGER2P43116 358 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms