RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 HSPA1BP0DMV9 641 aaKnown RBP17■□□□□ 0.31
LSM2-209ENST00000470083 ITPK1Q13572 414 aa17■□□□□ 0.31
LSM2-209ENST00000470083 NLGN1Q8N2Q7 840 aa17■□□□□ 0.31
LSM2-209ENST00000470083 TMF1P82094 1093 aa16.99■□□□□ 0.31
LSM2-209ENST00000470083 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
LSM2-209ENST00000470083 CCDC87Q9NVE4 849 aa16.99■□□□□ 0.31
LSM2-209ENST00000470083 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
LSM2-209ENST00000470083 INSRP06213 1382 aa16.98■□□□□ 0.31
LSM2-209ENST00000470083 SLC34A2O95436 690 aa16.97■□□□□ 0.31
LSM2-209ENST00000470083 KCNA3P22001 575 aa16.97■□□□□ 0.31
LSM2-209ENST00000470083 ATP6V1AP38606 617 aa16.97■□□□□ 0.31
LSM2-209ENST00000470083 DCAF5Q96JK2 942 aa16.97■□□□□ 0.31
LSM2-209ENST00000470083 CARD11Q9BXL7 1154 aa16.97■□□□□ 0.31
LSM2-209ENST00000470083 RNF181Q9P0P0 153 aa16.97■□□□□ 0.31
LSM2-209ENST00000470083 MAP2P11137 1827 aaKnown RBP16.97■□□□□ 0.31
LSM2-209ENST00000470083 HSP90AB2PQ58FF8 381 aa16.96■□□□□ 0.31
LSM2-209ENST00000470083 TRAPPC3LQ5T215 181 aa16.96■□□□□ 0.31
LSM2-209ENST00000470083 TMOD3Q9NYL9 352 aa16.96■□□□□ 0.31
LSM2-209ENST00000470083 ASAP1Q9ULH1 1129 aa16.96■□□□□ 0.31
LSM2-209ENST00000470083 N4BP2Q86UW6 1770 aaPredicted RBP16.96■□□□□ 0.31
LSM2-209ENST00000470083 PIM2Q9P1W9 311 aa16.95■□□□□ 0.3
LSM2-209ENST00000470083 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
LSM2-209ENST00000470083 FLT4P35916 1363 aa16.94■□□□□ 0.3
LSM2-209ENST00000470083 SIN3AQ96ST3 1273 aa16.94■□□□□ 0.3
LSM2-209ENST00000470083 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
LSM2-209ENST00000470083 KIF24Q5T7B8 1368 aa16.93■□□□□ 0.3
LSM2-209ENST00000470083 GYS1P13807 737 aa16.93■□□□□ 0.3
LSM2-209ENST00000470083 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
LSM2-209ENST00000470083 ITGB4P16144 1822 aa16.93■□□□□ 0.3
LSM2-209ENST00000470083 FYB1O15117 783 aa16.92■□□□□ 0.3
LSM2-209ENST00000470083 ARHGEF1Q92888 912 aaKnown RBP16.92■□□□□ 0.3
LSM2-209ENST00000470083 SPG7Q9UQ90 795 aa16.92■□□□□ 0.3
LSM2-209ENST00000470083 ZC3H4Q9UPT8 1303 aaKnown RBP16.92■□□□□ 0.3
LSM2-209ENST00000470083 KDRP35968 1356 aa16.91■□□□□ 0.3
LSM2-209ENST00000470083 C4AP0C0L4 1744 aa16.91■□□□□ 0.3
LSM2-209ENST00000470083 PKD1L3Q7Z443 1732 aa16.91■□□□□ 0.3
LSM2-209ENST00000470083 NCAPD2Q15021 1401 aa16.91■□□□□ 0.3
LSM2-209ENST00000470083 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
LSM2-209ENST00000470083 ATG3Q9NT62 314 aa16.91■□□□□ 0.3
LSM2-209ENST00000470083 TNRC6CQ9HCJ0 1690 aaKnown RBP16.91■□□□□ 0.3
LSM2-209ENST00000470083 BRCA1P38398 1863 aaKnown RBP16.9■□□□□ 0.3
LSM2-209ENST00000470083 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
LSM2-209ENST00000470083 RFC4P35249 363 aa16.89■□□□□ 0.29
LSM2-209ENST00000470083 NEUROD1Q13562 356 aa16.89■□□□□ 0.29
LSM2-209ENST00000470083 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
LSM2-209ENST00000470083 CNTNAP4Q9C0A0 1308 aa16.89■□□□□ 0.29
LSM2-209ENST00000470083 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
LSM2-209ENST00000470083 VEGFAP15692 232 aaPredicted RBP16.88■□□□□ 0.29
LSM2-209ENST00000470083 RPS6KA4O75676 772 aa16.87■□□□□ 0.29
LSM2-209ENST00000470083 SLC4A9Q96Q91 983 aa16.87■□□□□ 0.29
LSM2-209ENST00000470083 TESK2Q96S53 571 aa16.87■□□□□ 0.29
LSM2-209ENST00000470083 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
LSM2-209ENST00000470083 GLTPD2A6NH11 291 aa16.86■□□□□ 0.29
LSM2-209ENST00000470083 PHKG2P15735 406 aa16.86■□□□□ 0.29
LSM2-209ENST00000470083 IFNL2Q8IZJ0 200 aa16.86■□□□□ 0.29
LSM2-209ENST00000470083 TONSLQ96HA7 1378 aa16.85■□□□□ 0.29
LSM2-209ENST00000470083 CHRNA5P30532 468 aa16.84■□□□□ 0.29
LSM2-209ENST00000470083 DDR1Q08345 913 aa16.84■□□□□ 0.29
LSM2-209ENST00000470083 SLC24A1O60721 1099 aa16.83■□□□□ 0.28
LSM2-209ENST00000470083 LMNB1P20700 586 aa16.83■□□□□ 0.28
LSM2-209ENST00000470083 RASSF7Q02833 373 aa16.83■□□□□ 0.28
LSM2-209ENST00000470083 RBM42Q9BTD8 480 aaKnown RBP16.83■□□□□ 0.28
LSM2-209ENST00000470083 EMILIN1Q9Y6C2 1016 aa16.83■□□□□ 0.28
LSM2-209ENST00000470083 FKBP8Q14318 412 aa16.82■□□□□ 0.28
LSM2-209ENST00000470083 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
LSM2-209ENST00000470083 PRDM10Q9NQV6 1147 aa16.81■□□□□ 0.28
LSM2-209ENST00000470083 CREBZFQ9NS37 354 aa16.81■□□□□ 0.28
LSM2-209ENST00000470083 ZNF831Q5JPB2 1677 aa16.81■□□□□ 0.28
LSM2-209ENST00000470083 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
LSM2-209ENST00000470083 ERVV-2B6SEH9 535 aa16.8■□□□□ 0.28
LSM2-209ENST00000470083 EYA1Q99502 592 aa16.8■□□□□ 0.28
LSM2-209ENST00000470083 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
LSM2-209ENST00000470083 POLRMTO00411 1230 aaKnown RBP16.79■□□□□ 0.28
LSM2-209ENST00000470083 FOXN1O15353 648 aa16.79■□□□□ 0.28
LSM2-209ENST00000470083 SBF1O95248 1867 aa16.78■□□□□ 0.28
LSM2-209ENST00000470083 POTECB2RU33 542 aa16.78■□□□□ 0.28
LSM2-209ENST00000470083 MKRN1Q9UHC7 482 aaKnown RBP16.78■□□□□ 0.28
LSM2-209ENST00000470083 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.28
LSM2-209ENST00000470083 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
LSM2-209ENST00000470083 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
LSM2-209ENST00000470083 COL5A3P25940 1745 aaPredicted RBP16.76■□□□□ 0.27
LSM2-209ENST00000470083 TM4SF1P30408 202 aa16.76■□□□□ 0.27
LSM2-209ENST00000470083 PCDH10Q9P2E7 1040 aa16.76■□□□□ 0.27
LSM2-209ENST00000470083 HSP90AB1P08238 724 aaKnown RBP16.75■□□□□ 0.27
LSM2-209ENST00000470083 CTCFP49711 727 aaPredicted RBP16.75■□□□□ 0.27
LSM2-209ENST00000470083 CNTNAP1P78357 1384 aa16.75■□□□□ 0.27
LSM2-209ENST00000470083 DPY19L2Q6NUT2 758 aa16.74■□□□□ 0.27
LSM2-209ENST00000470083 NFKBIEO00221 500 aa16.73■□□□□ 0.27
LSM2-209ENST00000470083 PTCD1O75127 700 aaKnown RBP16.73■□□□□ 0.27
LSM2-209ENST00000470083 CHADLQ6NUI6 762 aa16.73■□□□□ 0.27
LSM2-209ENST00000470083 TTLL6Q8N841 843 aa16.73■□□□□ 0.27
LSM2-209ENST00000470083 AIDAQ96BJ3 306 aa16.73■□□□□ 0.27
LSM2-209ENST00000470083 MYH14Q7Z406 1995 aaKnown RBP16.73■□□□□ 0.27
LSM2-209ENST00000470083 CABP4P57796 275 aa16.72■□□□□ 0.27
LSM2-209ENST00000470083 FAM161AQ3B820 660 aa16.72■□□□□ 0.27
LSM2-209ENST00000470083 KIF20BQ96Q89 1820 aa16.7■□□□□ 0.26
LSM2-209ENST00000470083 ZPR1O75312 459 aa16.7■□□□□ 0.26
LSM2-209ENST00000470083 INTS5Q6P9B9 1019 aaKnown RBP16.7■□□□□ 0.26
LSM2-209ENST00000470083 CARD14Q9BXL6 1004 aa16.7■□□□□ 0.26
LSM2-209ENST00000470083 ANKRD26Q9UPS8 1709 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms