RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 PNMA6EA0A0J9YXQ4 647 aa12.58□□□□□ -0.4
SMC4-210ENST00000469762 TERF1P54274 439 aa12.58□□□□□ -0.4
SMC4-210ENST00000469762 MSNP26038 577 aaKnown RBP12.58□□□□□ -0.4
SMC4-210ENST00000469762 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
SMC4-210ENST00000469762 PDCL3Q9H2J4 239 aa12.58□□□□□ -0.4
SMC4-210ENST00000469762 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
SMC4-210ENST00000469762 MAP3K19Q56UN5 1328 aa12.57□□□□□ -0.4
SMC4-210ENST00000469762 TTC21BQ7Z4L5 1316 aa12.57□□□□□ -0.4
SMC4-210ENST00000469762 N4BP2Q86UW6 1770 aaPredicted RBP12.57□□□□□ -0.4
SMC4-210ENST00000469762 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
SMC4-210ENST00000469762 CHMLP26374 656 aa12.57□□□□□ -0.4
SMC4-210ENST00000469762 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
SMC4-210ENST00000469762 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.57□□□□□ -0.4
SMC4-210ENST00000469762 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMC4-210ENST00000469762 AGLP35573 1532 aa12.57□□□□□ -0.4
SMC4-210ENST00000469762 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
SMC4-210ENST00000469762 R3HCC1Q9Y3T6 440 aaKnown RBP12.56□□□□□ -0.4
SMC4-210ENST00000469762 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
SMC4-210ENST00000469762 ROBO2Q9HCK4 1378 aa12.56□□□□□ -0.4
SMC4-210ENST00000469762 GADD45BO75293 160 aaPredicted RBP12.56□□□□□ -0.4
SMC4-210ENST00000469762 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
SMC4-210ENST00000469762 RBM10P98175 930 aaKnown RBP12.56□□□□□ -0.4
SMC4-210ENST00000469762 SLC4A10Q6U841 1118 aa12.56□□□□□ -0.4
SMC4-210ENST00000469762 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
SMC4-210ENST00000469762 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
SMC4-210ENST00000469762 CEP170BQ9Y4F5 1589 aaPredicted RBP12.55□□□□□ -0.4
SMC4-210ENST00000469762 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
SMC4-210ENST00000469762 SIRT1Q96EB6 747 aa12.55□□□□□ -0.4
SMC4-210ENST00000469762 GLIPR1L2Q4G1C9 344 aa12.54□□□□□ -0.4
SMC4-210ENST00000469762 GDPD2Q9HCC8 539 aa12.54□□□□□ -0.4
SMC4-210ENST00000469762 STAP2Q9UGK3 403 aa12.54□□□□□ -0.4
SMC4-210ENST00000469762 ACEP12821 1306 aa12.54□□□□□ -0.4
SMC4-210ENST00000469762 RPAP1Q9BWH6 1393 aaPredicted RBP12.54□□□□□ -0.4
SMC4-210ENST00000469762 USP6P35125 1406 aa12.54□□□□□ -0.4
SMC4-210ENST00000469762 MX1P20591 662 aa12.54□□□□□ -0.4
SMC4-210ENST00000469762 CCT4P50991 539 aaKnown RBP12.54□□□□□ -0.4
SMC4-210ENST00000469762 INTS4Q96HW7 963 aaKnown RBP12.54□□□□□ -0.4
SMC4-210ENST00000469762 NOL8Q76FK4 1167 aaKnown RBP12.53□□□□□ -0.4
SMC4-210ENST00000469762 UPF3BQ9BZI7 483 aaKnown RBP12.53□□□□□ -0.4
SMC4-210ENST00000469762 KDRP35968 1356 aa12.53□□□□□ -0.4
SMC4-210ENST00000469762 HMMRO75330 724 aa12.53□□□□□ -0.4
SMC4-210ENST00000469762 GNAI2P04899 355 aa12.53□□□□□ -0.4
SMC4-210ENST00000469762 HAP1P54257 671 aaPredicted RBP12.53□□□□□ -0.4
SMC4-210ENST00000469762 PKNOX2Q96KN3 472 aa12.53□□□□□ -0.4
SMC4-210ENST00000469762 ANAPC15P60006 121 aa12.52□□□□□ -0.4
SMC4-210ENST00000469762 ATP8B2P98198 1209 aa12.52□□□□□ -0.4
SMC4-210ENST00000469762 LRRCC1Q9C099 1032 aa12.52□□□□□ -0.4
SMC4-210ENST00000469762 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
SMC4-210ENST00000469762 MBD3O95983 291 aa12.52□□□□□ -0.41
SMC4-210ENST00000469762 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
SMC4-210ENST00000469762 ARHGEF10O15013 1369 aa12.52□□□□□ -0.41
SMC4-210ENST00000469762 ADAMTS13Q76LX8 1427 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 PLEKHG3A1L390 1219 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 MCM2P49736 904 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 FOXD4L6Q3SYB3 417 aaPredicted RBP12.51□□□□□ -0.41
SMC4-210ENST00000469762 FOXD4L3Q6VB84 417 aaPredicted RBP12.51□□□□□ -0.41
SMC4-210ENST00000469762 USP48Q86UV5 1035 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 UQCRHLA0A096LP55 91 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 UQCRHP07919 91 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 MCM5P33992 734 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 FLIIQ13045 1269 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 CRYBG1Q9Y4K1 1723 aa12.51□□□□□ -0.41
SMC4-210ENST00000469762 USP44Q9H0E7 712 aa12.5□□□□□ -0.41
SMC4-210ENST00000469762 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
SMC4-210ENST00000469762 NWD1Q149M9 1564 aa12.5□□□□□ -0.41
SMC4-210ENST00000469762 NUTM2FA1L443 756 aa12.5□□□□□ -0.41
SMC4-210ENST00000469762 HSPA4P34932 840 aa12.5□□□□□ -0.41
SMC4-210ENST00000469762 JARID2Q92833 1246 aaPredicted RBP12.5□□□□□ -0.41
SMC4-210ENST00000469762 RILPL2Q969X0 211 aa12.5□□□□□ -0.41
SMC4-210ENST00000469762 PPP6R1Q9UPN7 881 aa12.5□□□□□ -0.41
SMC4-210ENST00000469762 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMC4-210ENST00000469762 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
SMC4-210ENST00000469762 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
SMC4-210ENST00000469762 MARF1Q9Y4F3 1742 aaKnown RBP12.49□□□□□ -0.41
SMC4-210ENST00000469762 TSPOAP1O95153 1857 aa12.49□□□□□ -0.41
SMC4-210ENST00000469762 SOX12O15370 315 aa12.49□□□□□ -0.41
SMC4-210ENST00000469762 TTC14Q96N46 770 aa12.49□□□□□ -0.41
SMC4-210ENST00000469762 EYA1Q99502 592 aa12.49□□□□□ -0.41
SMC4-210ENST00000469762 SRCIN1Q9C0H9 1055 aa12.49□□□□□ -0.41
SMC4-210ENST00000469762 TSPY26PQ9H489 355 aa12.49□□□□□ -0.41
SMC4-210ENST00000469762 RGPD8O14715 1765 aaPredicted RBP12.49□□□□□ -0.41
SMC4-210ENST00000469762 PI4K2BQ8TCG2 481 aa12.49□□□□□ -0.41
SMC4-210ENST00000469762 IGSF1Q8N6C5 1336 aa12.48□□□□□ -0.41
SMC4-210ENST00000469762 NECTIN2Q92692 538 aa12.48□□□□□ -0.41
SMC4-210ENST00000469762 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
SMC4-210ENST00000469762 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
SMC4-210ENST00000469762 TMEM87AQ8NBN3 555 aa12.48□□□□□ -0.41
SMC4-210ENST00000469762 TRIM6-TRIM34B2RNG4 842 aa12.48□□□□□ -0.41
SMC4-210ENST00000469762 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
SMC4-210ENST00000469762 IL1RAPL2Q9NP60 686 aa12.48□□□□□ -0.41
SMC4-210ENST00000469762 PIK3C2AO00443 1686 aa12.48□□□□□ -0.41
SMC4-210ENST00000469762 MLECQ14165 292 aa12.47□□□□□ -0.41
SMC4-210ENST00000469762 MPNDQ8N594 471 aa12.47□□□□□ -0.41
SMC4-210ENST00000469762 DTNBO60941 627 aa12.47□□□□□ -0.41
SMC4-210ENST00000469762 NUTM1Q86Y26 1132 aa12.47□□□□□ -0.41
SMC4-210ENST00000469762 SSH3Q8TE77 659 aa12.47□□□□□ -0.41
SMC4-210ENST00000469762 ZNF830Q96NB3 372 aaPredicted RBP12.47□□□□□ -0.41
SMC4-210ENST00000469762 LARP6Q9BRS8 491 aaKnown RBP12.47□□□□□ -0.41
SMC4-210ENST00000469762 PTPRUQ92729 1446 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms