RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 CASTP20810 708 aaKnown RBP18.58■□□□□ 0.57
BRAT1-204ENST00000469750 IFIT1P09914 478 aaKnown RBP18.58■□□□□ 0.56
BRAT1-204ENST00000469750 MPRIPQ6WCQ1 1025 aa18.58■□□□□ 0.56
BRAT1-204ENST00000469750 ZHX3Q9H4I2 956 aa18.58■□□□□ 0.56
BRAT1-204ENST00000469750 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.58■□□□□ 0.561e-6■■■■■ 224.2
BRAT1-204ENST00000469750 ERCC4Q92889 916 aaPredicted RBP18.57■□□□□ 0.56
BRAT1-204ENST00000469750 FANCAO15360 1455 aa18.57■□□□□ 0.56
BRAT1-204ENST00000469750 CCDC66A2RUB6 948 aa18.57■□□□□ 0.56
BRAT1-204ENST00000469750 SPC24Q8NBT2 197 aa18.57■□□□□ 0.56
BRAT1-204ENST00000469750 DNAAF4Q8WXU2 420 aa18.57■□□□□ 0.56
BRAT1-204ENST00000469750 BCL11BQ9C0K0 894 aaPredicted RBP18.57■□□□□ 0.56
BRAT1-204ENST00000469750 C14orf93Q9H972 538 aaKnown RBP18.57■□□□□ 0.56
BRAT1-204ENST00000469750 U3KPZ7 1027 aaPredicted RBP18.57■□□□□ 0.56
BRAT1-204ENST00000469750 CEBPAP49715 358 aaPredicted RBP18.57■□□□□ 0.56
BRAT1-204ENST00000469750 MYO6Q9UM54 1294 aa18.57■□□□□ 0.56
BRAT1-204ENST00000469750 TTC21BQ7Z4L5 1316 aa18.57■□□□□ 0.56
BRAT1-204ENST00000469750 PPFIBP1Q86W92 1011 aa18.57■□□□□ 0.56
BRAT1-204ENST00000469750 SMARCA5O60264 1052 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-204ENST00000469750 DBF4Q9UBU7 674 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-204ENST00000469750 ZPR1O75312 459 aa18.56■□□□□ 0.56
BRAT1-204ENST00000469750 HSP90AB3PQ58FF7 597 aa18.56■□□□□ 0.56
BRAT1-204ENST00000469750 HYPKQ9NX55 129 aa18.56■□□□□ 0.56
BRAT1-204ENST00000469750 PATL2C9JE40 543 aaKnown RBP18.56■□□□□ 0.56
BRAT1-204ENST00000469750 CAVIN4Q5BKX8 364 aa18.55■□□□□ 0.56
BRAT1-204ENST00000469750 IL27Q8NEV9 243 aa18.55■□□□□ 0.56
BRAT1-204ENST00000469750 BOLA2Q9H3K6 86 aa18.55■□□□□ 0.56
BRAT1-204ENST00000469750 F6X3S4 739 aa18.55■□□□□ 0.56
BRAT1-204ENST00000469750 BMP2KQ9NSY1 1161 aaPredicted RBP18.55■□□□□ 0.56
BRAT1-204ENST00000469750 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
BRAT1-204ENST00000469750 RPRD2Q5VT52 1461 aaKnown RBP18.55■□□□□ 0.56
BRAT1-204ENST00000469750 URB2Q14146 1524 aaKnown RBP18.55■□□□□ 0.56
BRAT1-204ENST00000469750 IFIT5Q13325 482 aaKnown RBP18.54■□□□□ 0.56
BRAT1-204ENST00000469750 LUC7LQ9NQ29 371 aaKnown RBP18.54■□□□□ 0.56
BRAT1-204ENST00000469750 TMOD2Q9NZR1 351 aa18.54■□□□□ 0.56
BRAT1-204ENST00000469750 NUP62CLQ9H1M0 184 aa18.54■□□□□ 0.56
BRAT1-204ENST00000469750 ZNF287Q9HBT7 754 aa18.54■□□□□ 0.56
BRAT1-204ENST00000469750 PRPF40BQ6NWY9 871 aaKnown RBP18.53■□□□□ 0.56
BRAT1-204ENST00000469750 CEP57L1Q8IYX8 460 aa18.53■□□□□ 0.56
BRAT1-204ENST00000469750 CBFA2T2O43439 604 aa18.53■□□□□ 0.56
BRAT1-204ENST00000469750 LRPPRCP42704 1394 aaKnown RBP18.53■□□□□ 0.56
BRAT1-204ENST00000469750 PTPRCP08575 1304 aa18.53■□□□□ 0.56
BRAT1-204ENST00000469750 RRP9O43818 475 aaKnown RBP18.53■□□□□ 0.56
BRAT1-204ENST00000469750 DDX11Q96FC9 970 aa18.53■□□□□ 0.56
BRAT1-204ENST00000469750 TANGO6Q9C0B7 1094 aa18.53■□□□□ 0.56
BRAT1-204ENST00000469750 MCM4P33991 863 aa18.53■□□□□ 0.56
BRAT1-204ENST00000469750 LRRFIP2Q9Y608 721 aaKnown RBP18.53■□□□□ 0.56
BRAT1-204ENST00000469750 C20orf194Q5TEA3 1177 aa18.52■□□□□ 0.56
BRAT1-204ENST00000469750 HMGN5P82970 282 aaKnown RBP18.52■□□□□ 0.56
BRAT1-204ENST00000469750 SSBP05455 408 aaKnown RBP eCLIP18.52■□□□□ 0.56
BRAT1-204ENST00000469750 PDCL3Q9H2J4 239 aa18.52■□□□□ 0.56
BRAT1-204ENST00000469750 KRT28Q7Z3Y7 464 aa18.52■□□□□ 0.55
BRAT1-204ENST00000469750 TRMT112Q9UI30 125 aaKnown RBP18.52■□□□□ 0.55
BRAT1-204ENST00000469750 FLIIQ13045 1269 aa18.51■□□□□ 0.55
BRAT1-204ENST00000469750 DEF6Q9H4E7 631 aa18.51■□□□□ 0.55
BRAT1-204ENST00000469750 ADAMTS2O95450 1211 aa18.51■□□□□ 0.55
BRAT1-204ENST00000469750 UPF3BQ9BZI7 483 aaKnown RBP18.5■□□□□ 0.55
BRAT1-204ENST00000469750 GRPEL1Q9HAV7 217 aa18.5■□□□□ 0.55
BRAT1-204ENST00000469750 USP5P45974 858 aa18.5■□□□□ 0.55
BRAT1-204ENST00000469750 PIBF1Q8WXW3 757 aa18.5■□□□□ 0.55
BRAT1-204ENST00000469750 NAPBQ9H115 298 aa18.5■□□□□ 0.55
BRAT1-204ENST00000469750 CEP131Q9UPN4 1083 aa18.5■□□□□ 0.55
BRAT1-204ENST00000469750 MAP3K12Q12852 859 aa18.5■□□□□ 0.55
BRAT1-204ENST00000469750 TXLNBQ8N3L3 684 aa18.5■□□□□ 0.55
BRAT1-204ENST00000469750 CCDC83Q8IWF9 413 aa18.5■□□□□ 0.55
BRAT1-204ENST00000469750 A0A087WZG4 1122 aa18.49■□□□□ 0.55
BRAT1-204ENST00000469750 ZNF76P36508 570 aa18.49■□□□□ 0.55
BRAT1-204ENST00000469750 CCDC8Q9H0W5 538 aaPredicted RBP18.49■□□□□ 0.55
BRAT1-204ENST00000469750 TRIM27P14373 513 aa18.49■□□□□ 0.55
BRAT1-204ENST00000469750 BRPF3Q9ULD4 1205 aa18.49■□□□□ 0.55
BRAT1-204ENST00000469750 MINDY4BA8MYZ0 360 aa18.49■□□□□ 0.55
BRAT1-204ENST00000469750 EXOC5O00471 708 aa18.49■□□□□ 0.55
BRAT1-204ENST00000469750 SLC5A1P13866 664 aa18.49■□□□□ 0.55
BRAT1-204ENST00000469750 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
BRAT1-204ENST00000469750 POLR3DP05423 398 aaPredicted RBP18.48■□□□□ 0.55
BRAT1-204ENST00000469750 ANKRD36BQ8N2N9 1353 aa18.48■□□□□ 0.55
BRAT1-204ENST00000469750 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
BRAT1-204ENST00000469750 ANKRD18BA2A2Z9 1011 aa18.48■□□□□ 0.55
BRAT1-204ENST00000469750 ACEP12821 1306 aa18.48■□□□□ 0.55
BRAT1-204ENST00000469750 UBE2Q2Q8WVN8 375 aa18.48■□□□□ 0.55
BRAT1-204ENST00000469750 MKNK2Q9HBH9 465 aa18.47■□□□□ 0.55
BRAT1-204ENST00000469750 SH2B1Q9NRF2 756 aaPredicted RBP18.47■□□□□ 0.55
BRAT1-204ENST00000469750 CCDC196A0A1B0GTZ2 297 aa18.47■□□□□ 0.55
BRAT1-204ENST00000469750 ANKIB1Q9P2G1 1089 aa18.47■□□□□ 0.55
BRAT1-204ENST00000469750 DISP3Q9P2K9 1392 aa18.47■□□□□ 0.55
BRAT1-204ENST00000469750 HMGB1P09429 215 aaKnown RBP18.47■□□□□ 0.55
BRAT1-204ENST00000469750 FERMT3Q86UX7 667 aa18.47■□□□□ 0.55
BRAT1-204ENST00000469750 DZIP1Q86YF9 867 aaKnown RBP18.47■□□□□ 0.55
BRAT1-204ENST00000469750 TEX13AQ9BXU3 409 aaPredicted RBP18.47■□□□□ 0.55
BRAT1-204ENST00000469750 SMTNL1A8MU46 457 aa18.46■□□□□ 0.55
BRAT1-204ENST00000469750 MPHOSPH10O00566 681 aaKnown RBP18.46■□□□□ 0.55
BRAT1-204ENST00000469750 CWC15Q9P013 229 aaKnown RBP18.46■□□□□ 0.55
BRAT1-204ENST00000469750 MAP3K11Q16584 847 aa18.46■□□□□ 0.55
BRAT1-204ENST00000469750 KRI1Q8N9T8 703 aaKnown RBP18.46■□□□□ 0.55
BRAT1-204ENST00000469750 KDM5BQ9UGL1 1544 aa18.46■□□□□ 0.54
BRAT1-204ENST00000469750 ZBTB3Q9H5J0 574 aa18.46■□□□□ 0.54
BRAT1-204ENST00000469750 SEC63Q9UGP8 760 aaKnown RBP18.46■□□□□ 0.54
BRAT1-204ENST00000469750 FBXO3Q9UK99 471 aa18.46■□□□□ 0.54
BRAT1-204ENST00000469750 CRACR2BQ8N4Y2 399 aaPredicted RBP18.45■□□□□ 0.54
BRAT1-204ENST00000469750 IL16Q14005 1332 aa18.45■□□□□ 0.54
BRAT1-204ENST00000469750 TNRQ92752 1358 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms