RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 HMMRO75330 724 aa14.76□□□□□ -0.05
VARS2-205ENST00000469358 NUTM1Q86Y26 1132 aa14.76□□□□□ -0.05
VARS2-205ENST00000469358 LTV1Q96GA3 475 aaPredicted RBP14.76□□□□□ -0.05
VARS2-205ENST00000469358 CWC22Q9HCG8 908 aaKnown RBP14.76□□□□□ -0.05
VARS2-205ENST00000469358 LRRFIP2Q9Y608 721 aaKnown RBP14.75□□□□□ -0.05
VARS2-205ENST00000469358 DLC1Q96QB1 1528 aa14.75□□□□□ -0.05
VARS2-205ENST00000469358 GNAI2P04899 355 aa14.75□□□□□ -0.05
VARS2-205ENST00000469358 GADD45BO75293 160 aaPredicted RBP14.75□□□□□ -0.05
VARS2-205ENST00000469358 MX1P20591 662 aa14.75□□□□□ -0.05
VARS2-205ENST00000469358 LRRCC1Q9C099 1032 aa14.74□□□□□ -0.05
VARS2-205ENST00000469358 RIMS1Q86UR5 1692 aaKnown RBP14.74□□□□□ -0.05
VARS2-205ENST00000469358 IBTKQ9P2D0 1353 aaPredicted RBP14.74□□□□□ -0.05
VARS2-205ENST00000469358 CHMLP26374 656 aa14.73□□□□□ -0.05
VARS2-205ENST00000469358 FLIIQ13045 1269 aa14.73□□□□□ -0.05
VARS2-205ENST00000469358 EYA1Q99502 592 aa14.73□□□□□ -0.05
VARS2-205ENST00000469358 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
VARS2-205ENST00000469358 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
VARS2-205ENST00000469358 STK31Q9BXU1 1019 aa14.72□□□□□ -0.05
VARS2-205ENST00000469358 RRP9O43818 475 aaKnown RBP14.72□□□□□ -0.05
VARS2-205ENST00000469358 CCT4P50991 539 aaKnown RBP14.72□□□□□ -0.05
VARS2-205ENST00000469358 OFD1O75665 1012 aa14.72□□□□□ -0.05
VARS2-205ENST00000469358 LRSAM1Q6UWE0 723 aa14.72□□□□□ -0.05
VARS2-205ENST00000469358 USHBP1Q8N6Y0 703 aa14.72□□□□□ -0.05
VARS2-205ENST00000469358 ESF1Q9H501 851 aaKnown RBP14.72□□□□□ -0.05
VARS2-205ENST00000469358 SETD1AO15047 1707 aaKnown RBP14.72□□□□□ -0.05
VARS2-205ENST00000469358 CPA1P15085 419 aa14.71□□□□□ -0.05
VARS2-205ENST00000469358 AMPHP49418 695 aa14.71□□□□□ -0.05
VARS2-205ENST00000469358 OSBPL3Q9H4L5 887 aa14.71□□□□□ -0.05
VARS2-205ENST00000469358 PHAXQ9H814 394 aaKnown RBP14.71□□□□□ -0.05
VARS2-205ENST00000469358 NRXN3Q9Y4C0 1643 aa14.71□□□□□ -0.05
VARS2-205ENST00000469358 SALL3Q9BXA9 1300 aa14.71□□□□□ -0.05
VARS2-205ENST00000469358 HAP1P54257 671 aaPredicted RBP14.71□□□□□ -0.05
VARS2-205ENST00000469358 BRD1O95696 1058 aa14.7□□□□□ -0.06
VARS2-205ENST00000469358 PDLIM2Q96JY6 352 aa14.7□□□□□ -0.06
VARS2-205ENST00000469358 TSPOAP1O95153 1857 aa14.7□□□□□ -0.06
VARS2-205ENST00000469358 REREQ9P2R6 1566 aa14.7□□□□□ -0.06
VARS2-205ENST00000469358 DDX54Q8TDD1 881 aaKnown RBP14.7□□□□□ -0.06
VARS2-205ENST00000469358 PEAK1Q9H792 1746 aa14.7□□□□□ -0.06
VARS2-205ENST00000469358 LTKP29376 864 aa14.69□□□□□ -0.06
VARS2-205ENST00000469358 ZNF830Q96NB3 372 aaPredicted RBP14.69□□□□□ -0.06
VARS2-205ENST00000469358 FAM13BQ9NYF5 915 aa14.69□□□□□ -0.06
VARS2-205ENST00000469358 ANXA1P04083 346 aa14.69□□□□□ -0.06
VARS2-205ENST00000469358 NOL7Q9UMY1 257 aaKnown RBP14.69□□□□□ -0.06
VARS2-205ENST00000469358 JARID2Q92833 1246 aaPredicted RBP14.69□□□□□ -0.06
VARS2-205ENST00000469358 USP44Q9H0E7 712 aa14.69□□□□□ -0.06
VARS2-205ENST00000469358 EIF2S2P20042 333 aaKnown RBP14.68□□□□□ -0.06
VARS2-205ENST00000469358 ATP8B2P98198 1209 aa14.68□□□□□ -0.06
VARS2-205ENST00000469358 C3P01024 1663 aa14.68□□□□□ -0.06
VARS2-205ENST00000469358 OVOS2A0A0J9YW53 1432 aa14.68□□□□□ -0.06
VARS2-205ENST00000469358 OVOS2Q6IE36 1432 aa14.68□□□□□ -0.06
VARS2-205ENST00000469358 USP48Q86UV5 1035 aa14.67□□□□□ -0.06
VARS2-205ENST00000469358 NGDNQ8NEJ9 315 aaKnown RBP14.67□□□□□ -0.06
VARS2-205ENST00000469358 IL17REQ8NFR9 667 aa14.67□□□□□ -0.06
VARS2-205ENST00000469358 MON2Q7Z3U7 1717 aa14.67□□□□□ -0.06
VARS2-205ENST00000469358 SURF6O75683 361 aaKnown RBP14.67□□□□□ -0.06
VARS2-205ENST00000469358 TPM2P07951 284 aa14.67□□□□□ -0.06
VARS2-205ENST00000469358 CEBPAP49715 358 aaPredicted RBP14.67□□□□□ -0.06
VARS2-205ENST00000469358 ZMYND15Q9H091 742 aa14.67□□□□□ -0.06
VARS2-205ENST00000469358 CEP170BQ9Y4F5 1589 aaPredicted RBP14.67□□□□□ -0.06
VARS2-205ENST00000469358 USP6P35125 1406 aa14.67□□□□□ -0.06
VARS2-205ENST00000469358 MCCP23508 829 aa14.66□□□□□ -0.06
VARS2-205ENST00000469358 CUL4AQ13619 759 aa14.66□□□□□ -0.06
VARS2-205ENST00000469358 SPG7Q9UQ90 795 aa14.66□□□□□ -0.06
VARS2-205ENST00000469358 RASEFQ8IZ41 740 aa14.66□□□□□ -0.06
VARS2-205ENST00000469358 C17orf53Q8N3J3 647 aaPredicted RBP14.66□□□□□ -0.06
VARS2-205ENST00000469358 PPP1R42Q7Z4L9 355 aa14.66□□□□□ -0.06
VARS2-205ENST00000469358 CNPY2Q9Y2B0 182 aa14.66□□□□□ -0.06
VARS2-205ENST00000469358 ZKSCAN5Q9Y2L8 839 aa14.66□□□□□ -0.06
VARS2-205ENST00000469358 PTMAP06454 111 aaKnown RBP14.65□□□□□ -0.06
VARS2-205ENST00000469358 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
VARS2-205ENST00000469358 CCDC30Q5VVM6 783 aa14.65□□□□□ -0.06
VARS2-205ENST00000469358 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.65□□□□□ -0.06
VARS2-205ENST00000469358 GNAI3P08754 354 aa14.65□□□□□ -0.06
VARS2-205ENST00000469358 NBPF7P0C2Y1 421 aaPredicted RBP14.65□□□□□ -0.06
VARS2-205ENST00000469358 NLRP6P59044 892 aa14.65□□□□□ -0.06
VARS2-205ENST00000469358 PLEKHG3A1L390 1219 aa14.64□□□□□ -0.07
VARS2-205ENST00000469358 CWC27Q6UX04 472 aaKnown RBP14.64□□□□□ -0.07
VARS2-205ENST00000469358 SRCIN1Q9C0H9 1055 aa14.64□□□□□ -0.07
VARS2-205ENST00000469358 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
VARS2-205ENST00000469358 C14orf37Q86TY3 774 aa14.64□□□□□ -0.07
VARS2-205ENST00000469358 TSPY26PQ9H489 355 aa14.64□□□□□ -0.07
VARS2-205ENST00000469358 UQCRHLA0A096LP55 91 aa14.64□□□□□ -0.07
VARS2-205ENST00000469358 UQCRHP07919 91 aa14.64□□□□□ -0.07
VARS2-205ENST00000469358 GLIPR1L2Q4G1C9 344 aa14.64□□□□□ -0.07
VARS2-205ENST00000469358 TSC1Q92574 1164 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 SOS1Q07889 1333 aaPredicted RBP14.63□□□□□ -0.07
VARS2-205ENST00000469358 NRKQ7Z2Y5 1582 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 GNAT3A8MTJ3 354 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 SRGAP3O43295 1099 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 LARGE1O95461 756 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 HDGFL1Q5TGJ6 251 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 USP25Q9UHP3 1055 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 ITSN1Q15811 1721 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 KCNQ3O43525 872 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 MBD3O95983 291 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
VARS2-205ENST00000469358 RBM33Q96EV2 1170 aaKnown RBP14.63□□□□□ -0.07
VARS2-205ENST00000469358 ZNF500O60304 480 aaPredicted RBP14.62□□□□□ -0.07
VARS2-205ENST00000469358 COL9A3Q14050 684 aaPredicted RBP14.62□□□□□ -0.07
VARS2-205ENST00000469358 FIBPO43427 364 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms