RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 SOCS7O14512 581 aa25.08■■□□□ 1.61
PCCB-208ENST00000468777 CCDC125Q86Z20 511 aa25.08■■□□□ 1.61
PCCB-208ENST00000468777 TRIM35Q9UPQ4 493 aa25.07■■□□□ 1.6
PCCB-208ENST00000468777 HTATSF1O43719 755 aaKnown RBP25.06■■□□□ 1.6
PCCB-208ENST00000468777 EN1Q05925 392 aaPredicted RBP25.06■■□□□ 1.6
PCCB-208ENST00000468777 SALL2Q9Y467 1007 aaPredicted RBP25.06■■□□□ 1.6
PCCB-208ENST00000468777 TEFQ10587 303 aa25.06■■□□□ 1.6
PCCB-208ENST00000468777 SIPA1L3O60292 1781 aaPredicted RBP25.05■■□□□ 1.6
PCCB-208ENST00000468777 ASAP1Q9ULH1 1129 aa25.05■■□□□ 1.6
PCCB-208ENST00000468777 BAG6P46379 1132 aa25.04■■□□□ 1.6
PCCB-208ENST00000468777 LMOD3Q0VAK6 560 aa25.02■■□□□ 1.6
PCCB-208ENST00000468777 SLC39A6Q13433 755 aa25.02■■□□□ 1.6
PCCB-208ENST00000468777 EZH2Q15910 746 aaKnown RBP25.02■■□□□ 1.6
PCCB-208ENST00000468777 ATG3Q9NT62 314 aa25.02■■□□□ 1.6
PCCB-208ENST00000468777 PALLDQ8WX93 1383 aa25.01■■□□□ 1.59
PCCB-208ENST00000468777 PLSCR1O15162 318 aa25■■□□□ 1.59
PCCB-208ENST00000468777 CAMKK2Q96RR4 588 aa25■■□□□ 1.59
PCCB-208ENST00000468777 KCNQ4P56696 695 aa24.99■■□□□ 1.59
PCCB-208ENST00000468777 MIS18AQ9NYP9 233 aa24.99■■□□□ 1.59
PCCB-208ENST00000468777 LY75O60449 1722 aa24.98■■□□□ 1.59
PCCB-208ENST00000468777 PAPPAQ13219 1627 aa24.98■■□□□ 1.59
PCCB-208ENST00000468777 PROM2Q8N271 834 aa24.98■■□□□ 1.59
PCCB-208ENST00000468777 RGPD3A6NKT7 1758 aaPredicted RBP24.97■■□□□ 1.59
PCCB-208ENST00000468777 RGPD4Q7Z3J3 1758 aa24.97■■□□□ 1.59
PCCB-208ENST00000468777 BTBD11A6QL63 1104 aa24.97■■□□□ 1.59
PCCB-208ENST00000468777 KCNQ3O43525 872 aa24.96■■□□□ 1.59
PCCB-208ENST00000468777 PTCD1O75127 700 aaKnown RBP24.96■■□□□ 1.59
PCCB-208ENST00000468777 TAF7Q15545 349 aaPredicted RBP24.96■■□□□ 1.59
PCCB-208ENST00000468777 TXNRD1Q16881 649 aa24.96■■□□□ 1.59
PCCB-208ENST00000468777 WWC1Q8IX03 1113 aa24.96■■□□□ 1.59
PCCB-208ENST00000468777 SMARCC1Q92922 1105 aaPredicted RBP24.95■■□□□ 1.58
PCCB-208ENST00000468777 RBM42Q9BTD8 480 aaKnown RBP24.94■■□□□ 1.58
PCCB-208ENST00000468777 ZNF790Q6PG37 636 aa24.94■■□□□ 1.58
PCCB-208ENST00000468777 LRRC4BQ9NT99 713 aa24.94■■□□□ 1.58
PCCB-208ENST00000468777 LAS1LQ9Y4W2 734 aaKnown RBP24.94■■□□□ 1.58
PCCB-208ENST00000468777 RREB1Q92766 1687 aa24.93■■□□□ 1.58
PCCB-208ENST00000468777 CCDC27Q2M243 656 aa24.93■■□□□ 1.58
PCCB-208ENST00000468777 TTC5Q8N0Z6 440 aa24.92■■□□□ 1.58
PCCB-208ENST00000468777 CCNL1Q9UK58 526 aaPredicted RBP24.92■■□□□ 1.58
PCCB-208ENST00000468777 UBR2Q8IWV8 1755 aa24.92■■□□□ 1.58
PCCB-208ENST00000468777 KCPQ6ZWJ8 1503 aa24.92■■□□□ 1.58
PCCB-208ENST00000468777 KDM3BQ7LBC6 1761 aa24.92■■□□□ 1.58
PCCB-208ENST00000468777 LOC102724428A0A0B4J2F2 783 aa24.92■■□□□ 1.58
PCCB-208ENST00000468777 SIK1P57059 783 aa24.92■■□□□ 1.58
PCCB-208ENST00000468777 SLC4A9Q96Q91 983 aa24.92■■□□□ 1.58
PCCB-208ENST00000468777 NUP188Q5SRE5 1749 aa24.9■■□□□ 1.58
PCCB-208ENST00000468777 ZNF496Q96IT1 587 aaPredicted RBP24.89■■□□□ 1.58
PCCB-208ENST00000468777 TSPYL4Q9UJ04 414 aa24.89■■□□□ 1.58
PCCB-208ENST00000468777 ATP6V1AP38606 617 aa24.88■■□□□ 1.57
PCCB-208ENST00000468777 HNRNPUQ00839 825 aaKnown RBP eCLIP24.88■■□□□ 1.57
PCCB-208ENST00000468777 NCBP3Q53F19 620 aaKnown RBP24.88■■□□□ 1.57
PCCB-208ENST00000468777 ITPK1Q13572 414 aa24.87■■□□□ 1.57
PCCB-208ENST00000468777 SLC27A3Q5K4L6 730 aa24.87■■□□□ 1.57
PCCB-208ENST00000468777 TAF1LQ8IZX4 1826 aa24.87■■□□□ 1.57
PCCB-208ENST00000468777 CFAP44Q96MT7 982 aa24.86■■□□□ 1.57
PCCB-208ENST00000468777 C5P01031 1676 aa24.86■■□□□ 1.57
PCCB-208ENST00000468777 CHL1O00533 1208 aa24.85■■□□□ 1.57
PCCB-208ENST00000468777 CALD1Q05682 793 aaKnown RBP24.85■■□□□ 1.57
PCCB-208ENST00000468777 TJP1Q07157 1748 aa24.85■■□□□ 1.57
PCCB-208ENST00000468777 NGEFQ8N5V2 710 aa24.85■■□□□ 1.57
PCCB-208ENST00000468777 ZNF521Q96K83 1311 aa24.85■■□□□ 1.57
PCCB-208ENST00000468777 FMNL2Q96PY5 1086 aa24.84■■□□□ 1.57
PCCB-208ENST00000468777 MBIPQ9NS73 344 aa24.84■■□□□ 1.57
PCCB-208ENST00000468777 IFT57Q9NWB7 429 aa24.84■■□□□ 1.57
PCCB-208ENST00000468777 ZNF853P0CG23 659 aa24.83■■□□□ 1.57
PCCB-208ENST00000468777 SPINK5Q9NQ38 1064 aaPredicted RBP24.83■■□□□ 1.57
PCCB-208ENST00000468777 HEG1Q9ULI3 1381 aa24.83■■□□□ 1.57
PCCB-208ENST00000468777 PRAMEF22A3QJZ6 481 aa24.83■■□□□ 1.56
PCCB-208ENST00000468777 LINC00116Q8NCU8 138 aa24.83■■□□□ 1.56
PCCB-208ENST00000468777 ANO8Q9HCE9 1232 aaPredicted RBP24.83■■□□□ 1.56
PCCB-208ENST00000468777 ZNF831Q5JPB2 1677 aa24.82■■□□□ 1.56
PCCB-208ENST00000468777 EIF4A1P60842 406 aaKnown RBP24.82■■□□□ 1.56
PCCB-208ENST00000468777 GNAI1P63096 354 aa24.82■■□□□ 1.56
PCCB-208ENST00000468777 DNAJC10Q8IXB1 793 aa24.82■■□□□ 1.56
PCCB-208ENST00000468777 TSR2Q969E8 191 aaKnown RBP24.82■■□□□ 1.56
PCCB-208ENST00000468777 WDR63Q8IWG1 891 aa24.81■■□□□ 1.56
PCCB-208ENST00000468777 BABAM1Q9NWV8 329 aa24.81■■□□□ 1.56
PCCB-208ENST00000468777 COL5A3P25940 1745 aaPredicted RBP24.81■■□□□ 1.56
PCCB-208ENST00000468777 KRT24Q2M2I5 525 aa24.81■■□□□ 1.56
PCCB-208ENST00000468777 C4BP0C0L5 1744 aa24.8■■□□□ 1.56
PCCB-208ENST00000468777 ZNF827Q17R98 1081 aa24.79■■□□□ 1.56
PCCB-208ENST00000468777 IL16Q14005 1332 aa24.79■■□□□ 1.56
PCCB-208ENST00000468777 VSIG10Q8N0Z9 540 aa24.79■■□□□ 1.56
PCCB-208ENST00000468777 CICQ96RK0 1608 aaPredicted RBP24.78■■□□□ 1.56
PCCB-208ENST00000468777 MYH14Q7Z406 1995 aaKnown RBP24.78■■□□□ 1.56
PCCB-208ENST00000468777 SNRPA1P09661 255 aaKnown RBP24.76■■□□□ 1.55
PCCB-208ENST00000468777 CDCA7LQ96GN5 454 aa24.76■■□□□ 1.55
PCCB-208ENST00000468777 USP16Q9Y5T5 823 aa24.76■■□□□ 1.55
PCCB-208ENST00000468777 SRCAPQ6ZRS2 3230 aa24.76■■□□□ 1.55
PCCB-208ENST00000468777 FANCIQ9NVI1 1328 aa24.75■■□□□ 1.55
PCCB-208ENST00000468777 GIGYF1O75420 1035 aaPredicted RBP24.75■■□□□ 1.55
PCCB-208ENST00000468777 GOLGA2Q08379 1002 aa24.75■■□□□ 1.55
PCCB-208ENST00000468777 SMIM5Q71RC9 77 aa24.75■■□□□ 1.55
PCCB-208ENST00000468777 AKT1S1Q96B36 256 aa24.75■■□□□ 1.55
PCCB-208ENST00000468777 TUBGCP6Q96RT7 1819 aa24.74■■□□□ 1.55
PCCB-208ENST00000468777 CYP19A1P11511 503 aaPredicted RBP24.74■■□□□ 1.55
PCCB-208ENST00000468777 CRKLP46109 303 aaKnown RBP24.74■■□□□ 1.55
PCCB-208ENST00000468777 NBPF14Q5TI25 921 aa24.74■■□□□ 1.55
PCCB-208ENST00000468777 AMIGO3Q86WK7 504 aa24.74■■□□□ 1.55
PCCB-208ENST00000468777 SLC15A2Q16348 729 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms