RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 CABP4P57796 275 aa26.17■■□□□ 1.78
GMDS-203ENST00000467288 AKAP4Q5JQC9 854 aa26.17■■□□□ 1.78
GMDS-203ENST00000467288 KLHL34Q8N239 644 aa26.16■■□□□ 1.78
GMDS-203ENST00000467288 CFAP53Q96M91 514 aa26.16■■□□□ 1.78
GMDS-203ENST00000467288 C4BP0C0L5 1744 aa26.16■■□□□ 1.78
GMDS-203ENST00000467288 U2SURPO15042 1029 aaKnown RBP26.15■■□□□ 1.78
GMDS-203ENST00000467288 COL23A1Q86Y22 540 aaPredicted RBP26.15■■□□□ 1.78
GMDS-203ENST00000467288 COL24A1Q17RW2 1714 aa26.14■■□□□ 1.78
GMDS-203ENST00000467288 GPR162Q16538 588 aa26.14■■□□□ 1.78
GMDS-203ENST00000467288 MTHFSDQ2M296 383 aaKnown RBP26.14■■□□□ 1.78
GMDS-203ENST00000467288 SCN11AQ9UI33 1791 aa26.13■■□□□ 1.77
GMDS-203ENST00000467288 ITPK1Q13572 414 aa26.13■■□□□ 1.77
GMDS-203ENST00000467288 ATP6V1AP38606 617 aa26.12■■□□□ 1.77
GMDS-203ENST00000467288 NFATC2IPQ8NCF5 419 aa26.12■■□□□ 1.77
GMDS-203ENST00000467288 LINC00116Q8NCU8 138 aa26.12■■□□□ 1.77
GMDS-203ENST00000467288 FLAD1Q8NFF5 587 aa26.12■■□□□ 1.77
GMDS-203ENST00000467288 MSH5O43196 834 aa26.11■■□□□ 1.77
GMDS-203ENST00000467288 AK7Q96M32 723 aa26.11■■□□□ 1.77
GMDS-203ENST00000467288 ZNF831Q5JPB2 1677 aa26.1■■□□□ 1.77
GMDS-203ENST00000467288 SLC4A9Q96Q91 983 aa26.1■■□□□ 1.77
GMDS-203ENST00000467288 RNMTO43148 476 aaKnown RBP26.09■■□□□ 1.77
GMDS-203ENST00000467288 LGR6Q9HBX8 967 aa26.09■■□□□ 1.77
GMDS-203ENST00000467288 AMIGO3Q86WK7 504 aa26.08■■□□□ 1.77
GMDS-203ENST00000467288 NUDCQ9Y266 331 aa26.08■■□□□ 1.77
GMDS-203ENST00000467288 ADAMTS7Q9UKP4 1686 aa26.08■■□□□ 1.77
GMDS-203ENST00000467288 UBR3Q6ZT12 1888 aa26.07■■□□□ 1.76
GMDS-203ENST00000467288 MRC1P22897 1456 aa26.07■■□□□ 1.76
GMDS-203ENST00000467288 NLGN2Q8NFZ4 835 aa26.07■■□□□ 1.76
GMDS-203ENST00000467288 RBM42Q9BTD8 480 aaKnown RBP26.07■■□□□ 1.76
GMDS-203ENST00000467288 SLC52A2Q9HAB3 445 aa26.07■■□□□ 1.76
GMDS-203ENST00000467288 PELP1Q8IZL8 1130 aaKnown RBP26.06■■□□□ 1.76
GMDS-203ENST00000467288 SSFA2P28290 1259 aa26.05■■□□□ 1.76
GMDS-203ENST00000467288 RSPH6AQ9H0K4 717 aa26.05■■□□□ 1.76
GMDS-203ENST00000467288 GAS2L2Q8NHY3 880 aa26.04■■□□□ 1.76
GMDS-203ENST00000467288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.03■■□□□ 1.76
GMDS-203ENST00000467288 PRKAR2BP31323 418 aa26.03■■□□□ 1.76
GMDS-203ENST00000467288 SMIM5Q71RC9 77 aa26.03■■□□□ 1.76
GMDS-203ENST00000467288 GNPATO15228 680 aa26.02■■□□□ 1.76
GMDS-203ENST00000467288 PTCD1O75127 700 aaKnown RBP26.02■■□□□ 1.76
GMDS-203ENST00000467288 MSL1Q68DK7 614 aa26.02■■□□□ 1.76
GMDS-203ENST00000467288 GOLGB1Q14789 3259 aaKnown RBP26.02■■□□□ 1.76
GMDS-203ENST00000467288 VIRMAQ69YN4 1812 aaKnown RBP26.02■■□□□ 1.76
GMDS-203ENST00000467288 PHF14O94880 888 aa26.01■■□□□ 1.75
GMDS-203ENST00000467288 U2AF1L5P0DN76 240 aaPredicted RBP26.01■■□□□ 1.75
GMDS-203ENST00000467288 COL5A3P25940 1745 aaPredicted RBP26.01■■□□□ 1.75
GMDS-203ENST00000467288 U2AF1Q01081 240 aaKnown RBP eCLIP26.01■■□□□ 1.75
GMDS-203ENST00000467288 RC3H1Q5TC82 1133 aaKnown RBP26.01■■□□□ 1.75
GMDS-203ENST00000467288 PHACTR3Q96KR7 559 aa26.01■■□□□ 1.75
GMDS-203ENST00000467288 CNTNAP4Q9C0A0 1308 aa26■■□□□ 1.75
GMDS-203ENST00000467288 DDX10Q13206 875 aaKnown RBP26■■□□□ 1.75
GMDS-203ENST00000467288 GNAT3A8MTJ3 354 aa25.99■■□□□ 1.75
GMDS-203ENST00000467288 FCHSD2O94868 740 aa25.99■■□□□ 1.75
GMDS-203ENST00000467288 CICQ96RK0 1608 aaPredicted RBP25.99■■□□□ 1.75
GMDS-203ENST00000467288 IL17REQ8NFR9 667 aa25.98■■□□□ 1.75
GMDS-203ENST00000467288 RTCBQ9Y3I0 505 aaKnown RBP25.97■■□□□ 1.75
GMDS-203ENST00000467288 SLC39A6Q13433 755 aa25.96■■□□□ 1.75
GMDS-203ENST00000467288 TJP1Q07157 1748 aa25.96■■□□□ 1.75
GMDS-203ENST00000467288 RPS6KA4O75676 772 aa25.95■■□□□ 1.74
GMDS-203ENST00000467288 YBX3P16989 372 aaKnown RBP eCLIP25.95■■□□□ 1.74
GMDS-203ENST00000467288 RALBP1Q15311 655 aa25.95■■□□□ 1.74
GMDS-203ENST00000467288 KCPQ6ZWJ8 1503 aa25.93■■□□□ 1.74
GMDS-203ENST00000467288 MYH14Q7Z406 1995 aaKnown RBP25.93■■□□□ 1.74
GMDS-203ENST00000467288 GRIN3BO60391 1043 aa25.93■■□□□ 1.74
GMDS-203ENST00000467288 ADRA2BP18089 450 aa25.93■■□□□ 1.74
GMDS-203ENST00000467288 ZEB1P37275 1124 aaPredicted RBP25.93■■□□□ 1.74
GMDS-203ENST00000467288 C1QTNF8P60827 252 aa25.93■■□□□ 1.74
GMDS-203ENST00000467288 TRAPPC3LQ5T215 181 aa25.93■■□□□ 1.74
GMDS-203ENST00000467288 CEMIPQ8WUJ3 1361 aa25.93■■□□□ 1.74
GMDS-203ENST00000467288 CRKLP46109 303 aaKnown RBP25.92■■□□□ 1.74
GMDS-203ENST00000467288 TEFQ10587 303 aa25.92■■□□□ 1.74
GMDS-203ENST00000467288 CD2APQ9Y5K6 639 aa25.92■■□□□ 1.74
GMDS-203ENST00000467288 DNAJC10Q8IXB1 793 aa25.91■■□□□ 1.74
GMDS-203ENST00000467288 ARHGEF1Q92888 912 aaKnown RBP25.91■■□□□ 1.74
GMDS-203ENST00000467288 SIPA1L3O60292 1781 aaPredicted RBP25.9■■□□□ 1.74
GMDS-203ENST00000467288 VSIG10Q8N0Z9 540 aa25.89■■□□□ 1.74
GMDS-203ENST00000467288 UBR2Q8IWV8 1755 aa25.89■■□□□ 1.73
GMDS-203ENST00000467288 INTS5Q6P9B9 1019 aaKnown RBP25.88■■□□□ 1.73
GMDS-203ENST00000467288 SENP3-EIF4A1A0A087X0R7 540 aa25.86■■□□□ 1.73
GMDS-203ENST00000467288 CYP19A1P11511 503 aaPredicted RBP25.86■■□□□ 1.73
GMDS-203ENST00000467288 ZNF790Q6PG37 636 aa25.86■■□□□ 1.73
GMDS-203ENST00000467288 TTC5Q8N0Z6 440 aa25.86■■□□□ 1.73
GMDS-203ENST00000467288 HTATSF1O43719 755 aaKnown RBP25.85■■□□□ 1.73
GMDS-203ENST00000467288 RFC4P35249 363 aa25.85■■□□□ 1.73
GMDS-203ENST00000467288 PLEKHF1Q96S99 279 aa25.85■■□□□ 1.73
GMDS-203ENST00000467288 CCDC87Q9NVE4 849 aa25.85■■□□□ 1.73
GMDS-203ENST00000467288 C4AP0C0L4 1744 aa25.84■■□□□ 1.73
GMDS-203ENST00000467288 NLGN1Q8N2Q7 840 aa25.84■■□□□ 1.73
GMDS-203ENST00000467288 RTF1Q92541 710 aaKnown RBP25.84■■□□□ 1.73
GMDS-203ENST00000467288 MYBBP1AQ9BQG0 1328 aaKnown RBP25.84■■□□□ 1.73
GMDS-203ENST00000467288 GIGYF1O75420 1035 aaPredicted RBP25.83■■□□□ 1.73
GMDS-203ENST00000467288 GYS1P13807 737 aa25.83■■□□□ 1.73
GMDS-203ENST00000467288 ZNF496Q96IT1 587 aaPredicted RBP25.83■■□□□ 1.73
GMDS-203ENST00000467288 CHD4Q14839 1912 aa25.82■■□□□ 1.72
GMDS-203ENST00000467288 MCM10Q7L590 875 aa25.82■■□□□ 1.72
GMDS-203ENST00000467288 HEG1Q9ULI3 1381 aa25.82■■□□□ 1.72
GMDS-203ENST00000467288 NEFMP07197 916 aa25.81■■□□□ 1.72
GMDS-203ENST00000467288 MMP10P09238 476 aa25.81■■□□□ 1.72
GMDS-203ENST00000467288 SOS1Q07889 1333 aaPredicted RBP25.81■■□□□ 1.72
GMDS-203ENST00000467288 BTBD11A6QL63 1104 aa25.8■■□□□ 1.72
GMDS-203ENST00000467288 PNNQ9H307 717 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms