RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 RASSF7Q02833 373 aa18.42■□□□□ 0.54
UBR4-210ENST00000466969 VIRMAQ69YN4 1812 aaKnown RBP18.42■□□□□ 0.54
UBR4-210ENST00000466969 TMEM88BA6NKF7 163 aa18.41■□□□□ 0.54
UBR4-210ENST00000466969 CENPJQ9HC77 1338 aaPredicted RBP18.41■□□□□ 0.54
UBR4-210ENST00000466969 BEGAINQ9BUH8 593 aa18.4■□□□□ 0.54
UBR4-210ENST00000466969 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
UBR4-210ENST00000466969 KDM6AO15550 1401 aaPredicted RBP18.39■□□□□ 0.53
UBR4-210ENST00000466969 FAM208AQ9UK61 1670 aaKnown RBP18.38■□□□□ 0.53
UBR4-210ENST00000466969 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
UBR4-210ENST00000466969 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
UBR4-210ENST00000466969 DEFB115Q30KQ5 88 aa18.36■□□□□ 0.53
UBR4-210ENST00000466969 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
UBR4-210ENST00000466969 PASKQ96RG2 1323 aa18.36■□□□□ 0.53
UBR4-210ENST00000466969 MCOLN1Q9GZU1 580 aa18.36■□□□□ 0.53
UBR4-210ENST00000466969 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
UBR4-210ENST00000466969 LOC102724428A0A0B4J2F2 783 aa18.35■□□□□ 0.53
UBR4-210ENST00000466969 SIK1P57059 783 aa18.35■□□□□ 0.53
UBR4-210ENST00000466969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
UBR4-210ENST00000466969 IP6K1Q92551 441 aa18.35■□□□□ 0.53
UBR4-210ENST00000466969 MEGF6O75095 1541 aa18.34■□□□□ 0.53
UBR4-210ENST00000466969 WDR33Q9C0J8 1336 aaKnown RBP18.34■□□□□ 0.53
UBR4-210ENST00000466969 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
UBR4-210ENST00000466969 POTEJP0CG39 1038 aa18.34■□□□□ 0.53
UBR4-210ENST00000466969 CGNL1Q0VF96 1302 aa18.33■□□□□ 0.53
UBR4-210ENST00000466969 CHRNA5P30532 468 aa18.33■□□□□ 0.52
UBR4-210ENST00000466969 RTCBQ9Y3I0 505 aaKnown RBP18.33■□□□□ 0.52
UBR4-210ENST00000466969 TIAM2Q8IVF5 1701 aa18.32■□□□□ 0.52
UBR4-210ENST00000466969 EVC2Q86UK5 1308 aa18.32■□□□□ 0.52
UBR4-210ENST00000466969 RASSF10A6NK89 507 aa18.32■□□□□ 0.52
UBR4-210ENST00000466969 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
UBR4-210ENST00000466969 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
UBR4-210ENST00000466969 GYS1P13807 737 aa18.3■□□□□ 0.52
UBR4-210ENST00000466969 RFC4P35249 363 aa18.3■□□□□ 0.52
UBR4-210ENST00000466969 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
UBR4-210ENST00000466969 LDHDQ86WU2 507 aa18.3■□□□□ 0.52
UBR4-210ENST00000466969 NME9Q86XW9 330 aa18.3■□□□□ 0.52
UBR4-210ENST00000466969 RAPGEF4Q8WZA2 1011 aa18.3■□□□□ 0.52
UBR4-210ENST00000466969 ITPK1Q13572 414 aa18.28■□□□□ 0.52
UBR4-210ENST00000466969 PIGBQ92521 554 aa18.28■□□□□ 0.52
UBR4-210ENST00000466969 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
UBR4-210ENST00000466969 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
UBR4-210ENST00000466969 ADRA2BP18089 450 aa18.27■□□□□ 0.52
UBR4-210ENST00000466969 DGKZQ13574 1117 aa18.27■□□□□ 0.52
UBR4-210ENST00000466969 ABT1Q9ULW3 272 aaKnown RBP18.27■□□□□ 0.52
UBR4-210ENST00000466969 CCDC88AQ3V6T2 1871 aa18.26■□□□□ 0.51
UBR4-210ENST00000466969 TATP17735 454 aaPredicted RBP18.26■□□□□ 0.51
UBR4-210ENST00000466969 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
UBR4-210ENST00000466969 TSKSQ9UJT2 592 aa18.26■□□□□ 0.51
UBR4-210ENST00000466969 IQCA1LA6NCM1 817 aa18.25■□□□□ 0.51
UBR4-210ENST00000466969 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
UBR4-210ENST00000466969 MAP2P11137 1827 aaKnown RBP18.25■□□□□ 0.51
UBR4-210ENST00000466969 ITGB4P16144 1822 aa18.25■□□□□ 0.51
UBR4-210ENST00000466969 ITGBL1O95965 494 aaPredicted RBP18.24■□□□□ 0.51
UBR4-210ENST00000466969 ERFEQ4G0M1 354 aa18.24■□□□□ 0.51
UBR4-210ENST00000466969 PAXIP1Q6ZW49 1069 aaPredicted RBP18.24■□□□□ 0.51
UBR4-210ENST00000466969 ECE1P42892 770 aa18.23■□□□□ 0.51
UBR4-210ENST00000466969 SOX10P56693 466 aa18.23■□□□□ 0.51
UBR4-210ENST00000466969 CD163L1Q9NR16 1453 aa18.22■□□□□ 0.51
UBR4-210ENST00000466969 RGPD2P0DJD1 1756 aa18.22■□□□□ 0.51
UBR4-210ENST00000466969 NFKBIEO00221 500 aa18.21■□□□□ 0.51
UBR4-210ENST00000466969 DDNO94850 711 aaPredicted RBP18.21■□□□□ 0.51
UBR4-210ENST00000466969 HOXC9P31274 260 aa18.21■□□□□ 0.51
UBR4-210ENST00000466969 AMPHP49418 695 aa18.21■□□□□ 0.51
UBR4-210ENST00000466969 GRM1Q13255 1194 aa18.21■□□□□ 0.51
UBR4-210ENST00000466969 USHBP1Q8N6Y0 703 aa18.21■□□□□ 0.51
UBR4-210ENST00000466969 GPR101Q96P66 508 aaPredicted RBP18.21■□□□□ 0.51
UBR4-210ENST00000466969 CLEC11AQ9Y240 323 aa18.21■□□□□ 0.51
UBR4-210ENST00000466969 MON2Q7Z3U7 1717 aa18.2■□□□□ 0.5
UBR4-210ENST00000466969 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
UBR4-210ENST00000466969 NBPF6Q5VWK0 638 aa18.2■□□□□ 0.5
UBR4-210ENST00000466969 TTLL6Q8N841 843 aa18.2■□□□□ 0.5
UBR4-210ENST00000466969 CAPNS2Q96L46 248 aa18.2■□□□□ 0.5
UBR4-210ENST00000466969 NBPF4Q96M43 638 aa18.2■□□□□ 0.5
UBR4-210ENST00000466969 CYP27B1O15528 508 aa18.19■□□□□ 0.5
UBR4-210ENST00000466969 CA12O43570 354 aa18.19■□□□□ 0.5
UBR4-210ENST00000466969 TMOD3Q9NYL9 352 aa18.19■□□□□ 0.5
UBR4-210ENST00000466969 ASAP1Q9ULH1 1129 aa18.19■□□□□ 0.5
UBR4-210ENST00000466969 DDR1Q08345 913 aa18.18■□□□□ 0.5
UBR4-210ENST00000466969 TAF1DQ9H5J8 278 aaPredicted RBP18.18■□□□□ 0.5
UBR4-210ENST00000466969 CASP8AP2Q9UKL3 1982 aa18.18■□□□□ 0.5
UBR4-210ENST00000466969 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
UBR4-210ENST00000466969 RC3H1Q5TC82 1133 aaKnown RBP18.17■□□□□ 0.5
UBR4-210ENST00000466969 SBNO2Q9Y2G9 1366 aa18.17■□□□□ 0.5
UBR4-210ENST00000466969 MAP3K19Q56UN5 1328 aa18.16■□□□□ 0.5
UBR4-210ENST00000466969 THSD7BQ9C0I4 1608 aa18.16■□□□□ 0.5
UBR4-210ENST00000466969 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
UBR4-210ENST00000466969 FKBP8Q14318 412 aa18.15■□□□□ 0.5
UBR4-210ENST00000466969 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
UBR4-210ENST00000466969 HABP4Q5JVS0 413 aaKnown RBP18.14■□□□□ 0.49
UBR4-210ENST00000466969 CYP4F22Q6NT55 531 aa18.14■□□□□ 0.49
UBR4-210ENST00000466969 NBPF15Q8N660 670 aa18.14■□□□□ 0.49
UBR4-210ENST00000466969 DICER1Q9UPY3 1922 aaKnown RBP18.13■□□□□ 0.49
UBR4-210ENST00000466969 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
UBR4-210ENST00000466969 MAP2K2P36507 400 aa18.13■□□□□ 0.49
UBR4-210ENST00000466969 HDGFL2Q7Z4V5 671 aaPredicted RBP18.13■□□□□ 0.49
UBR4-210ENST00000466969 CNTNAP4Q9C0A0 1308 aa18.13■□□□□ 0.49
UBR4-210ENST00000466969 SCN4AP35499 1836 aa18.12■□□□□ 0.49
UBR4-210ENST00000466969 SRP68Q9UHB9 627 aaKnown RBP18.12■□□□□ 0.49
UBR4-210ENST00000466969 LTBP1Q14766 1721 aa18.12■□□□□ 0.49
UBR4-210ENST00000466969 DLL1O00548 723 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms