RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 EXOC6BQ9Y2D4 811 aa15.84■□□□□ 0.13
PDZRN3-205ENST00000466780 AGLP35573 1532 aa15.84■□□□□ 0.13
PDZRN3-205ENST00000466780 RNF214Q8ND24 703 aa15.83■□□□□ 0.13
PDZRN3-205ENST00000466780 PRR36Q9H6K5 1346 aa15.83■□□□□ 0.12
PDZRN3-205ENST00000466780 SPATA31D1Q6ZQQ2 1576 aa15.82■□□□□ 0.12
PDZRN3-205ENST00000466780 MCM5P33992 734 aa15.82■□□□□ 0.12
PDZRN3-205ENST00000466780 MCM2P49736 904 aa15.82■□□□□ 0.12
PDZRN3-205ENST00000466780 ITSN1Q15811 1721 aa15.81■□□□□ 0.12
PDZRN3-205ENST00000466780 CCDC39Q9UFE4 941 aa15.81■□□□□ 0.12
PDZRN3-205ENST00000466780 CCT4P50991 539 aaKnown RBP15.81■□□□□ 0.12
PDZRN3-205ENST00000466780 HSP90AB2PQ58FF8 381 aa15.81■□□□□ 0.12
PDZRN3-205ENST00000466780 NOL8Q76FK4 1167 aaKnown RBP15.81■□□□□ 0.12
PDZRN3-205ENST00000466780 RGPD1P0DJD0 1748 aa15.8■□□□□ 0.12
PDZRN3-205ENST00000466780 PEAK1Q9H792 1746 aa15.8■□□□□ 0.12
PDZRN3-205ENST00000466780 UQCRHLA0A096LP55 91 aa15.8■□□□□ 0.12
PDZRN3-205ENST00000466780 FOXO3O43524 673 aa15.8■□□□□ 0.12
PDZRN3-205ENST00000466780 UQCRHP07919 91 aa15.8■□□□□ 0.12
PDZRN3-205ENST00000466780 CHMLP26374 656 aa15.8■□□□□ 0.12
PDZRN3-205ENST00000466780 INTS4Q96HW7 963 aaKnown RBP15.8■□□□□ 0.12
PDZRN3-205ENST00000466780 GNAI2P04899 355 aa15.8■□□□□ 0.12
PDZRN3-205ENST00000466780 MX1P20591 662 aa15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 HDGFP51858 240 aaKnown RBP15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 ANAPC15P60006 121 aa15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 TSPY26PQ9H489 355 aa15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 ANO2Q9NQ90 1003 aa15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 FAM13BQ9NYF5 915 aa15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 PNMA6EA0A0J9YXQ4 647 aa15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 NUTM2FA1L443 756 aa15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 CSPP1Q1MSJ5 1256 aa15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 LRRCC1Q9C099 1032 aa15.79■□□□□ 0.12
PDZRN3-205ENST00000466780 GADD45BO75293 160 aaPredicted RBP15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 IL17RAQ96F46 866 aa15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 TTC21BQ7Z4L5 1316 aa15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 OVOS2A0A0J9YW53 1432 aa15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 OVOS2Q6IE36 1432 aa15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 MCCP23508 829 aa15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 UNC5CLQ8IV45 518 aa15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 UPF3BQ9BZI7 483 aaKnown RBP15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 GDPD2Q9HCC8 539 aa15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 TSPYL4Q9UJ04 414 aa15.78■□□□□ 0.12
PDZRN3-205ENST00000466780 RILPL2Q969X0 211 aa15.77■□□□□ 0.12
PDZRN3-205ENST00000466780 FOXD4L6Q3SYB3 417 aaPredicted RBP15.77■□□□□ 0.11
PDZRN3-205ENST00000466780 FOXD4L3Q6VB84 417 aaPredicted RBP15.77■□□□□ 0.11
PDZRN3-205ENST00000466780 IL25Q9H293 177 aa15.77■□□□□ 0.11
PDZRN3-205ENST00000466780 TRIM6-TRIM34B2RNG4 842 aa15.76■□□□□ 0.11
PDZRN3-205ENST00000466780 MTHFSDQ2M296 383 aaKnown RBP15.76■□□□□ 0.11
PDZRN3-205ENST00000466780 MAP3K19Q56UN5 1328 aa15.76■□□□□ 0.11
PDZRN3-205ENST00000466780 TECPR2O15040 1411 aa15.76■□□□□ 0.11
PDZRN3-205ENST00000466780 SSH2Q76I76 1423 aa15.76■□□□□ 0.11
PDZRN3-205ENST00000466780 STAP2Q9UGK3 403 aa15.76■□□□□ 0.11
PDZRN3-205ENST00000466780 ATP8B2P98198 1209 aa15.75■□□□□ 0.11
PDZRN3-205ENST00000466780 SIRT1Q96EB6 747 aa15.75■□□□□ 0.11
PDZRN3-205ENST00000466780 RIMS1Q86UR5 1692 aaKnown RBP15.75■□□□□ 0.11
PDZRN3-205ENST00000466780 USP48Q86UV5 1035 aa15.75■□□□□ 0.11
PDZRN3-205ENST00000466780 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
PDZRN3-205ENST00000466780 SYAP1Q96A49 352 aaPredicted RBP15.74■□□□□ 0.11
PDZRN3-205ENST00000466780 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
PDZRN3-205ENST00000466780 ACEP12821 1306 aa15.74■□□□□ 0.11
PDZRN3-205ENST00000466780 SASS6Q6UVJ0 657 aa15.74■□□□□ 0.11
PDZRN3-205ENST00000466780 TCHHQ07283 1943 aa15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 NALCNQ8IZF0 1738 aa15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 ARHGEF10O15013 1369 aa15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 TNRQ92752 1358 aa15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 DYNC1I1O14576 645 aa15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 SOX12O15370 315 aa15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 GNAI3P08754 354 aa15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 FLIIQ13045 1269 aa15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 PTMAP06454 111 aaKnown RBP15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 XRN1Q8IZH2 1706 aaKnown RBP15.73■□□□□ 0.11
PDZRN3-205ENST00000466780 USP31Q70CQ4 1352 aa15.72■□□□□ 0.11
PDZRN3-205ENST00000466780 RPAP1Q9BWH6 1393 aaPredicted RBP15.72■□□□□ 0.11
PDZRN3-205ENST00000466780 WDR33Q9C0J8 1336 aaKnown RBP15.72■□□□□ 0.11
PDZRN3-205ENST00000466780 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
PDZRN3-205ENST00000466780 LRRFIP2Q9Y608 721 aaKnown RBP15.72■□□□□ 0.11
PDZRN3-205ENST00000466780 HSPA4P34932 840 aa15.72■□□□□ 0.11
PDZRN3-205ENST00000466780 FKBP5Q13451 457 aaPredicted RBP15.72■□□□□ 0.11
PDZRN3-205ENST00000466780 STK31Q9BXU1 1019 aa15.72■□□□□ 0.11
PDZRN3-205ENST00000466780 SRCIN1Q9C0H9 1055 aa15.72■□□□□ 0.11
PDZRN3-205ENST00000466780 ROBO2Q9HCK4 1378 aa15.71■□□□□ 0.11
PDZRN3-205ENST00000466780 USP6P35125 1406 aa15.71■□□□□ 0.11
PDZRN3-205ENST00000466780 KIAA2012Q0VF49 1180 aa15.71■□□□□ 0.11
PDZRN3-205ENST00000466780 MPNDQ8N594 471 aa15.71■□□□□ 0.11
PDZRN3-205ENST00000466780 TMEM87AQ8NBN3 555 aa15.71■□□□□ 0.11
PDZRN3-205ENST00000466780 PHF14O94880 888 aa15.7■□□□□ 0.1
PDZRN3-205ENST00000466780 NECTIN2Q92692 538 aa15.7■□□□□ 0.1
PDZRN3-205ENST00000466780 IL1RAPL2Q9NP60 686 aa15.7■□□□□ 0.1
PDZRN3-205ENST00000466780 FAM208AQ9UK61 1670 aaKnown RBP15.7■□□□□ 0.1
PDZRN3-205ENST00000466780 TMEM2Q9UHN6 1383 aa15.7■□□□□ 0.1
PDZRN3-205ENST00000466780 AOX1Q06278 1338 aa15.7■□□□□ 0.1
PDZRN3-205ENST00000466780 PLEKHG3A1L390 1219 aa15.69■□□□□ 0.1
PDZRN3-205ENST00000466780 USP25Q9UHP3 1055 aa15.69■□□□□ 0.1
PDZRN3-205ENST00000466780 CNPY2Q9Y2B0 182 aa15.69■□□□□ 0.1
PDZRN3-205ENST00000466780 TOPAZ1Q8N9V7 1692 aa15.69■□□□□ 0.1
PDZRN3-205ENST00000466780 KDRP35968 1356 aa15.69■□□□□ 0.1
PDZRN3-205ENST00000466780 UVSSAQ2YD98 709 aa15.69■□□□□ 0.1
PDZRN3-205ENST00000466780 NUTM1Q86Y26 1132 aa15.69■□□□□ 0.1
PDZRN3-205ENST00000466780 ZNF830Q96NB3 372 aaPredicted RBP15.69■□□□□ 0.1
PDZRN3-205ENST00000466780 SLC26A8Q96RN1 970 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms