RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 ADH1CP00326 375 aa10.63□□□□□ -0.71
SPTA1-203ENST00000465741 MYCP01106 439 aaPredicted RBP10.63□□□□□ -0.71
SPTA1-203ENST00000465741 NR5A1Q13285 461 aa10.63□□□□□ -0.71
SPTA1-203ENST00000465741 KCTD17Q8N5Z5 321 aa10.63□□□□□ -0.71
SPTA1-203ENST00000465741 KIFC2Q96AC6 838 aa10.63□□□□□ -0.71
SPTA1-203ENST00000465741 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
SPTA1-203ENST00000465741 AQRO60306 1485 aaKnown RBP eCLIP10.62□□□□□ -0.71
SPTA1-203ENST00000465741 IFT140Q96RY7 1462 aa10.62□□□□□ -0.71
SPTA1-203ENST00000465741 CRTC2Q53ET0 693 aaPredicted RBP10.62□□□□□ -0.71
SPTA1-203ENST00000465741 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
SPTA1-203ENST00000465741 OGFOD1Q8N543 542 aa10.62□□□□□ -0.71
SPTA1-203ENST00000465741 DNAAF2Q9NVR5 837 aaKnown RBP10.62□□□□□ -0.71
SPTA1-203ENST00000465741 RBM19Q9Y4C8 960 aaKnown RBP10.62□□□□□ -0.71
SPTA1-203ENST00000465741 ERVH48-1M5A8F1 160 aa10.61□□□□□ -0.71
SPTA1-203ENST00000465741 BMP1P13497 986 aa10.61□□□□□ -0.71
SPTA1-203ENST00000465741 GTF2IP78347 998 aa10.61□□□□□ -0.71
SPTA1-203ENST00000465741 PTK7Q13308 1070 aa10.61□□□□□ -0.71
SPTA1-203ENST00000465741 LARGE2Q8N3Y3 721 aa10.61□□□□□ -0.71
SPTA1-203ENST00000465741 CDCA7Q9BWT1 371 aaPredicted RBP10.61□□□□□ -0.71
SPTA1-203ENST00000465741 ALDH1A1P00352 501 aa10.6□□□□□ -0.71
SPTA1-203ENST00000465741 CARMIL1Q5VZK9 1371 aa10.6□□□□□ -0.71
SPTA1-203ENST00000465741 ZBTB7CA1YPR0 619 aa10.59□□□□□ -0.71
SPTA1-203ENST00000465741 GMPRP36959 345 aa10.59□□□□□ -0.71
SPTA1-203ENST00000465741 GRM5P41594 1212 aa10.59□□□□□ -0.71
SPTA1-203ENST00000465741 ANKMY2Q8IV38 441 aa10.59□□□□□ -0.71
SPTA1-203ENST00000465741 CCDC116Q8IYX3 515 aa10.59□□□□□ -0.71
SPTA1-203ENST00000465741 FAM200AQ8TCP9 573 aa10.59□□□□□ -0.71
SPTA1-203ENST00000465741 ZNF608Q9ULD9 1512 aaPredicted RBP10.58□□□□□ -0.72
SPTA1-203ENST00000465741 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
SPTA1-203ENST00000465741 PATL2C9JE40 543 aaKnown RBP10.58□□□□□ -0.72
SPTA1-203ENST00000465741 CLDN10P78369 228 aa10.58□□□□□ -0.72
SPTA1-203ENST00000465741 PSME1Q06323 249 aa10.58□□□□□ -0.72
SPTA1-203ENST00000465741 CC2D2BQ6DHV5 1058 aa10.58□□□□□ -0.72
SPTA1-203ENST00000465741 B4GALNT3Q6L9W6 998 aa10.58□□□□□ -0.72
SPTA1-203ENST00000465741 SIX5Q8N196 739 aa10.58□□□□□ -0.72
SPTA1-203ENST00000465741 NXF1Q9UBU9 619 aaKnown RBP10.58□□□□□ -0.72
SPTA1-203ENST00000465741 ZMIZ1Q9ULJ6 1067 aa10.58□□□□□ -0.72
SPTA1-203ENST00000465741 TMEM88BA6NKF7 163 aa10.57□□□□□ -0.72
SPTA1-203ENST00000465741 ERVK-9P63128 1117 aa10.57□□□□□ -0.72
SPTA1-203ENST00000465741 ZNF594Q96JF6 807 aaPredicted RBP10.57□□□□□ -0.72
SPTA1-203ENST00000465741 PGPEP1Q9NXJ5 209 aa10.57□□□□□ -0.72
SPTA1-203ENST00000465741 TMEM164Q5U3C3 297 aa10.56□□□□□ -0.72
SPTA1-203ENST00000465741 STK32AQ8WU08 396 aa10.56□□□□□ -0.72
SPTA1-203ENST00000465741 EMILIN1Q9Y6C2 1016 aa10.56□□□□□ -0.72
SPTA1-203ENST00000465741 WASF2Q9Y6W5 498 aa10.56□□□□□ -0.72
SPTA1-203ENST00000465741 BRD1O95696 1058 aa10.55□□□□□ -0.72
SPTA1-203ENST00000465741 VEGFBP49765 207 aa10.55□□□□□ -0.72
SPTA1-203ENST00000465741 DPYDQ12882 1025 aa10.55□□□□□ -0.72
SPTA1-203ENST00000465741 PPP1R26Q5T8A7 1209 aaPredicted RBP10.55□□□□□ -0.72
SPTA1-203ENST00000465741 CCDC102BQ68D86 513 aa10.55□□□□□ -0.72
SPTA1-203ENST00000465741 PCDHGA11Q9Y5H2 935 aa10.55□□□□□ -0.72
SPTA1-203ENST00000465741 RANGAP1P46060 587 aaPredicted RBP10.54□□□□□ -0.72
SPTA1-203ENST00000465741 SEC13P55735 322 aa10.54□□□□□ -0.72
SPTA1-203ENST00000465741 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
SPTA1-203ENST00000465741 AEBP1Q8IUX7 1158 aa10.54□□□□□ -0.72
SPTA1-203ENST00000465741 PRXQ9BXM0 1461 aa10.54□□□□□ -0.72
SPTA1-203ENST00000465741 ERBB4Q15303 1308 aa10.54□□□□□ -0.72
SPTA1-203ENST00000465741 ZBTB7BO15156 539 aaPredicted RBP10.53□□□□□ -0.72
SPTA1-203ENST00000465741 ZNF784Q8NCA9 323 aaPredicted RBP10.53□□□□□ -0.72
SPTA1-203ENST00000465741 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
SPTA1-203ENST00000465741 CYLDQ9NQC7 956 aa10.53□□□□□ -0.72
SPTA1-203ENST00000465741 TMPRSS4Q9NRS4 437 aa10.53□□□□□ -0.72
SPTA1-203ENST00000465741 KIAA1024Q9UPX6 916 aa10.53□□□□□ -0.72
SPTA1-203ENST00000465741 TARBP1Q13395 1621 aaKnown RBP10.53□□□□□ -0.72
SPTA1-203ENST00000465741 CAPN5O15484 640 aaPredicted RBP10.52□□□□□ -0.73
SPTA1-203ENST00000465741 SCTRP47872 440 aa10.52□□□□□ -0.73
SPTA1-203ENST00000465741 TRIM26Q12899 539 aaPredicted RBP10.52□□□□□ -0.73
SPTA1-203ENST00000465741 NNTQ13423 1086 aa10.52□□□□□ -0.73
SPTA1-203ENST00000465741 SLC16A10Q8TF71 515 aa10.52□□□□□ -0.73
SPTA1-203ENST00000465741 CHMP7Q8WUX9 453 aaPredicted RBP10.52□□□□□ -0.73
SPTA1-203ENST00000465741 GRIN2BQ13224 1484 aa10.52□□□□□ -0.73
SPTA1-203ENST00000465741 RAPGEF2Q9Y4G8 1499 aa10.52□□□□□ -0.73
SPTA1-203ENST00000465741 H3BM21 787 aa10.51□□□□□ -0.73
SPTA1-203ENST00000465741 KCNA1Q09470 495 aa10.51□□□□□ -0.73
SPTA1-203ENST00000465741 CYP2U1Q7Z449 544 aa10.51□□□□□ -0.73
SPTA1-203ENST00000465741 TNIKQ9UKE5 1360 aa10.51□□□□□ -0.73
SPTA1-203ENST00000465741 GOLGA3Q08378 1498 aa10.5□□□□□ -0.73
SPTA1-203ENST00000465741 NR3C2P08235 984 aa10.5□□□□□ -0.73
SPTA1-203ENST00000465741 ZSCAN1Q8NBB4 408 aa10.5□□□□□ -0.73
SPTA1-203ENST00000465741 CLP1Q92989 425 aaKnown RBP10.5□□□□□ -0.73
SPTA1-203ENST00000465741 OSBPL3Q9H4L5 887 aa10.5□□□□□ -0.73
SPTA1-203ENST00000465741 CARNS1A5YM72 827 aa10.49□□□□□ -0.73
SPTA1-203ENST00000465741 DKK1O94907 266 aa10.49□□□□□ -0.73
SPTA1-203ENST00000465741 NPAS3Q8IXF0 933 aa10.49□□□□□ -0.73
SPTA1-203ENST00000465741 LOC100996750A0A140TA64 210 aa10.48□□□□□ -0.73
SPTA1-203ENST00000465741 M0R2N6 131 aa10.48□□□□□ -0.73
SPTA1-203ENST00000465741 IRF7Q92985 503 aa10.48□□□□□ -0.73
SPTA1-203ENST00000465741 KRTAP4-6Q9BYQ5 205 aa10.48□□□□□ -0.73
SPTA1-203ENST00000465741 FHAD1B1AJZ9 1412 aa10.48□□□□□ -0.73
SPTA1-203ENST00000465741 LILRA1O75019 489 aa10.47□□□□□ -0.73
SPTA1-203ENST00000465741 GNRH1P01148 92 aa10.47□□□□□ -0.73
SPTA1-203ENST00000465741 ESCO1Q5FWF5 840 aa10.47□□□□□ -0.73
SPTA1-203ENST00000465741 ZFP42Q96MM3 310 aa10.47□□□□□ -0.73
SPTA1-203ENST00000465741 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
SPTA1-203ENST00000465741 SFI1A8K8P3 1242 aa10.46□□□□□ -0.73
SPTA1-203ENST00000465741 WASLO00401 505 aaPredicted RBP10.46□□□□□ -0.73
SPTA1-203ENST00000465741 BACH1O14867 736 aa10.46□□□□□ -0.73
SPTA1-203ENST00000465741 FAM69CQ0P6D2 419 aa10.46□□□□□ -0.73
SPTA1-203ENST00000465741 SNAPC4Q5SXM2 1469 aa10.45□□□□□ -0.74
SPTA1-203ENST00000465741 GDF10P55107 478 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms