RNA–Protein interactions for RNA: ENST00000465402.1

KDM5C-209, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-209ENST00000465402 FKBP8Q14318 412 aa11.77□□□□□ -0.53
KDM5C-209ENST00000465402 FAM208AQ9UK61 1670 aaKnown RBP11.77□□□□□ -0.53
KDM5C-209ENST00000465402 CANXP27824 592 aaKnown RBP11.76□□□□□ -0.53
KDM5C-209ENST00000465402 TXNRD1Q16881 649 aa11.76□□□□□ -0.53
KDM5C-209ENST00000465402 AMOTQ4VCS5 1084 aa11.76□□□□□ -0.53
KDM5C-209ENST00000465402 DUSP27Q5VZP5 1158 aa11.76□□□□□ -0.53
KDM5C-209ENST00000465402 CDCA7LQ96GN5 454 aa11.76□□□□□ -0.53
KDM5C-209ENST00000465402 EYA1Q99502 592 aa11.76□□□□□ -0.53
KDM5C-209ENST00000465402 SHANK3Q9BYB0 1731 aa11.75□□□□□ -0.53
KDM5C-209ENST00000465402 PLEKHO1Q53GL0 409 aaPredicted RBP11.75□□□□□ -0.53
KDM5C-209ENST00000465402 RAPGEF4Q8WZA2 1011 aa11.75□□□□□ -0.53
KDM5C-209ENST00000465402 ZNF428Q96B54 188 aa11.75□□□□□ -0.53
KDM5C-209ENST00000465402 CHMP4AQ9BY43 222 aa11.75□□□□□ -0.53
KDM5C-209ENST00000465402 IFT57Q9NWB7 429 aa11.75□□□□□ -0.53
KDM5C-209ENST00000465402 MS4A1P11836 297 aa11.74□□□□□ -0.53
KDM5C-209ENST00000465402 C1orf141Q5JVX7 400 aa11.74□□□□□ -0.53
KDM5C-209ENST00000465402 USHBP1Q8N6Y0 703 aa11.74□□□□□ -0.53
KDM5C-209ENST00000465402 DDX54Q8TDD1 881 aaKnown RBP11.74□□□□□ -0.53
KDM5C-209ENST00000465402 MEGF6O75095 1541 aa11.73□□□□□ -0.53
KDM5C-209ENST00000465402 ZBTB7AO95365 584 aa11.73□□□□□ -0.53
KDM5C-209ENST00000465402 RRP1P56182 461 aaKnown RBP11.73□□□□□ -0.53
KDM5C-209ENST00000465402 AEBP1Q8IUX7 1158 aa11.73□□□□□ -0.53
KDM5C-209ENST00000465402 TRMT2AQ8IZ69 625 aaKnown RBP11.73□□□□□ -0.53
KDM5C-209ENST00000465402 DOT1LQ8TEK3 1739 aa11.73□□□□□ -0.53
KDM5C-209ENST00000465402 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
KDM5C-209ENST00000465402 TATP17735 454 aaPredicted RBP11.72□□□□□ -0.53
KDM5C-209ENST00000465402 PHACTR3Q96KR7 559 aa11.72□□□□□ -0.53
KDM5C-209ENST00000465402 SPON1Q9HCB6 807 aa11.72□□□□□ -0.53
KDM5C-209ENST00000465402 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
KDM5C-209ENST00000465402 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
KDM5C-209ENST00000465402 PAPPAQ13219 1627 aa11.71□□□□□ -0.53
KDM5C-209ENST00000465402 NCAPD2Q15021 1401 aa11.71□□□□□ -0.53
KDM5C-209ENST00000465402 MAP3K5Q99683 1374 aa11.71□□□□□ -0.53
KDM5C-209ENST00000465402 NBPF6Q5VWK0 638 aa11.71□□□□□ -0.53
KDM5C-209ENST00000465402 NBPF4Q96M43 638 aa11.71□□□□□ -0.53
KDM5C-209ENST00000465402 SPG7Q9UQ90 795 aa11.71□□□□□ -0.53
KDM5C-209ENST00000465402 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
KDM5C-209ENST00000465402 RNF123Q5XPI4 1314 aa11.7□□□□□ -0.54
KDM5C-209ENST00000465402 FANCIQ9NVI1 1328 aa11.7□□□□□ -0.54
KDM5C-209ENST00000465402 KCNQ4P56696 695 aa11.7□□□□□ -0.54
KDM5C-209ENST00000465402 SLC15A2Q16348 729 aa11.7□□□□□ -0.54
KDM5C-209ENST00000465402 CFAP44Q96MT7 982 aa11.7□□□□□ -0.54
KDM5C-209ENST00000465402 LRRC4BQ9NT99 713 aa11.7□□□□□ -0.54
KDM5C-209ENST00000465402 BABAM1Q9NWV8 329 aa11.7□□□□□ -0.54
KDM5C-209ENST00000465402 STK32BQ9NY57 414 aa11.7□□□□□ -0.54
KDM5C-209ENST00000465402 PPP1R1BQ9UD71 204 aaPredicted RBP11.7□□□□□ -0.54
KDM5C-209ENST00000465402 HSP90AB1P08238 724 aaKnown RBP11.69□□□□□ -0.54
KDM5C-209ENST00000465402 ZNF827Q17R98 1081 aa11.69□□□□□ -0.54
KDM5C-209ENST00000465402 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
KDM5C-209ENST00000465402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.69□□□□□ -0.545e-7■□□□□ 10.3
KDM5C-209ENST00000465402 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
KDM5C-209ENST00000465402 KIF16BQ96L93 1317 aa11.68□□□□□ -0.54
KDM5C-209ENST00000465402 IPO8O15397 1037 aaKnown RBP11.68□□□□□ -0.54
KDM5C-209ENST00000465402 PTGER2P43116 358 aa11.68□□□□□ -0.54
KDM5C-209ENST00000465402 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
KDM5C-209ENST00000465402 MTHFSDQ2M296 383 aaKnown RBP11.68□□□□□ -0.54
KDM5C-209ENST00000465402 AKAP4Q5JQC9 854 aa11.68□□□□□ -0.54
KDM5C-209ENST00000465402 ZNF530Q6P9A1 599 aaPredicted RBP11.68□□□□□ -0.54
KDM5C-209ENST00000465402 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
KDM5C-209ENST00000465402 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
KDM5C-209ENST00000465402 TEFQ10587 303 aa11.67□□□□□ -0.54
KDM5C-209ENST00000465402 ZCRB1Q8TBF4 217 aaKnown RBP11.67□□□□□ -0.54
KDM5C-209ENST00000465402 RNF39Q9H2S5 420 aa11.67□□□□□ -0.54
KDM5C-209ENST00000465402 CHMP4BQ9H444 224 aaKnown RBP11.67□□□□□ -0.54
KDM5C-209ENST00000465402 EXOSC9Q06265 439 aaKnown RBP11.66□□□□□ -0.54
KDM5C-209ENST00000465402 AAMPQ13685 434 aa11.66□□□□□ -0.54
KDM5C-209ENST00000465402 ALDH1L2Q3SY69 923 aa11.66□□□□□ -0.54
KDM5C-209ENST00000465402 SMC4Q9NTJ3 1288 aa11.66□□□□□ -0.54
KDM5C-209ENST00000465402 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
KDM5C-209ENST00000465402 LY75O60449 1722 aa11.66□□□□□ -0.54
KDM5C-209ENST00000465402 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
KDM5C-209ENST00000465402 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.54
KDM5C-209ENST00000465402 TOGARAM1Q9Y4F4 1720 aa11.65□□□□□ -0.54
KDM5C-209ENST00000465402 PDE3AQ14432 1141 aa11.64□□□□□ -0.55
KDM5C-209ENST00000465402 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
KDM5C-209ENST00000465402 MCM10Q7L590 875 aa11.64□□□□□ -0.55
KDM5C-209ENST00000465402 FTSJ3Q8IY81 847 aaKnown RBP11.64□□□□□ -0.55
KDM5C-209ENST00000465402 AKT1S1Q96B36 256 aa11.64□□□□□ -0.55
KDM5C-209ENST00000465402 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
KDM5C-209ENST00000465402 SPINK5Q9NQ38 1064 aaPredicted RBP11.64□□□□□ -0.55
KDM5C-209ENST00000465402 ZNF853P0CG23 659 aa11.63□□□□□ -0.55
KDM5C-209ENST00000465402 RARSP54136 660 aaKnown RBP11.63□□□□□ -0.55
KDM5C-209ENST00000465402 IRX6P78412 446 aaPredicted RBP11.63□□□□□ -0.55
KDM5C-209ENST00000465402 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
KDM5C-209ENST00000465402 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
KDM5C-209ENST00000465402 IFNL2Q8IZJ0 200 aa11.63□□□□□ -0.55
KDM5C-209ENST00000465402 FRAT1Q92837 279 aaPredicted RBP11.63□□□□□ -0.55
KDM5C-209ENST00000465402 MTFR1LQ9H019 292 aa11.63□□□□□ -0.55
KDM5C-209ENST00000465402 MBIPQ9NS73 344 aa11.63□□□□□ -0.55
KDM5C-209ENST00000465402 ITGB4P16144 1822 aa11.63□□□□□ -0.55
KDM5C-209ENST00000465402 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
KDM5C-209ENST00000465402 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
KDM5C-209ENST00000465402 CHL1O00533 1208 aa11.62□□□□□ -0.55
KDM5C-209ENST00000465402 CYP27B1O15528 508 aa11.62□□□□□ -0.55
KDM5C-209ENST00000465402 CCDC136Q96JN2 1154 aa11.62□□□□□ -0.55
KDM5C-209ENST00000465402 THUMPD2Q9BTF0 503 aaKnown RBP11.62□□□□□ -0.55
KDM5C-209ENST00000465402 STK31Q9BXU1 1019 aa11.62□□□□□ -0.55
KDM5C-209ENST00000465402 FHDC1Q9C0D6 1143 aaPredicted RBP11.62□□□□□ -0.55
KDM5C-209ENST00000465402 QSER1Q2KHR3 1735 aa11.62□□□□□ -0.55
KDM5C-209ENST00000465402 PKD1L3Q7Z443 1732 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms