RNA–Protein interactions for RNA: ENST00000464699.5

KRTCAP3-205, Transcript of keratinocyte associated protein 3, human

TSL 3

Gene KRTCAP3, Length 724 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRTCAP3-205	ENST00000464699	GAS2L2	Q8NHY3	880 aa		33.74	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	PHACTR3	Q96KR7	559 aa		33.74	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	MTFR1L	Q9H019	292 aa		33.74	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	LGR6	Q9HBX8	967 aa		33.74	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.74	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	TAF1L	Q8IZX4	1826 aa		33.73	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	RNMT	O43148	476 aa	Known RBP	33.72	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	HMGB2	P26583	209 aa	Known RBP	33.72	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	LOC102724428	A0A0B4J2F2	783 aa		33.71	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	SIK1	P57059	783 aa		33.71	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	C5	P01031	1676 aa		33.71	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	SYT17	Q9BSW7	474 aa		33.7	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.7	■■■□□ 2.99
KRTCAP3-205	ENST00000464699	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.69	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	TFCP2L1	Q9NZI6	479 aa		33.68	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	GNAT3	A8MTJ3	354 aa		33.67	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	SLC52A2	Q9HAB3	445 aa		33.67	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	MAP3K5	Q99683	1374 aa		33.67	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	ADAMTS7	Q9UKP4	1686 aa		33.67	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	QSER1	Q2KHR3	1735 aa		33.66	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	TUBGCP6	Q96RT7	1819 aa		33.65	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	ATP6V1A	P38606	617 aa		33.65	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	UTRN	P46939	3433 aa		33.64	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	RBM42	Q9BTD8	480 aa	Known RBP	33.64	■■■□□ 2.98
KRTCAP3-205	ENST00000464699	MRC1	P22897	1456 aa		33.62	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	CHD4	Q14839	1912 aa		33.61	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	PNPLA7	Q6ZV29	1317 aa		33.61	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	NEFM	P07197	916 aa		33.61	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	ITPK1	Q13572	414 aa		33.61	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.61	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	IL17RE	Q8NFR9	667 aa		33.61	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	C4B	P0C0L5	1744 aa		33.61	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	LINC00116	Q8NCU8	138 aa		33.59	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	SLC4A9	Q96Q91	983 aa		33.59	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	PNN	Q9H307	717 aa	Known RBP	33.59	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	PTCD1	O75127	700 aa	Known RBP	33.58	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	ARX	Q96QS3	562 aa		33.58	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	ZNF831	Q5JPB2	1677 aa		33.58	■■■□□ 2.97
KRTCAP3-205	ENST00000464699	COL24A1	Q17RW2	1714 aa		33.57	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	AK7	Q96M32	723 aa		33.57	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	TEF	Q10587	303 aa		33.56	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	PLEKHF1	Q96S99	279 aa		33.56	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	SLC39A6	Q13433	755 aa		33.54	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	SLC16A10	Q8TF71	515 aa		33.54	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	COL23A1	Q86Y22	540 aa	Predicted RBP	33.53	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	RTF1	Q92541	710 aa	Known RBP	33.53	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	UBR3	Q6ZT12	1888 aa		33.52	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	MSH5	O43196	834 aa		33.52	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	SIPA1L3	O60292	1781 aa	Predicted RBP	33.52	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	DLG5	Q8TDM6	1919 aa		33.51	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	CEMIP	Q8WUJ3	1361 aa		33.51	■■■□□ 2.96
KRTCAP3-205	ENST00000464699	FLAD1	Q8NFF5	587 aa		33.51	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	HTATSF1	O43719	755 aa	Known RBP	33.5	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	MAPK8IP3	Q9UPT6	1336 aa		33.5	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	COL5A3	P25940	1745 aa	Predicted RBP	33.49	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	WDR43	Q15061	677 aa	Known RBP eCLIP	33.48	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	MCM10	Q7L590	875 aa		33.48	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	GNPAT	O15228	680 aa		33.47	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	AMIGO3	Q86WK7	504 aa		33.47	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	DCTN1	Q14203	1278 aa		33.46	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	NFE2L2	Q16236	605 aa		33.46	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	RC3H1	Q5TC82	1133 aa	Known RBP	33.46	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	SMIM5	Q71RC9	77 aa		33.46	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	MYH14	Q7Z406	1995 aa	Known RBP	33.45	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	PHF14	O94880	888 aa		33.45	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	TTC5	Q8N0Z6	440 aa		33.45	■■■□□ 2.95
KRTCAP3-205	ENST00000464699	TJP1	Q07157	1748 aa		33.45	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.44	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	SSFA2	P28290	1259 aa		33.44	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	UBR2	Q8IWV8	1755 aa		33.44	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	KCP	Q6ZWJ8	1503 aa		33.43	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	CNTNAP4	Q9C0A0	1308 aa		33.43	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	CIC	Q96RK0	1608 aa	Predicted RBP	33.42	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	ANP32C	O43423	234 aa		33.42	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	ZNF790	Q6PG37	636 aa		33.42	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	BTBD11	A6QL63	1104 aa		33.41	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	DNAJC10	Q8IXB1	793 aa		33.41	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	ADAMTS8	Q9UP79	889 aa		33.41	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	RTCB	Q9Y3I0	505 aa	Known RBP	33.41	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	CRKL	P46109	303 aa	Known RBP	33.39	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	CCDC146	Q8IYE0	955 aa		33.39	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	VSIG10	Q8N0Z9	540 aa		33.39	■■■□□ 2.94
KRTCAP3-205	ENST00000464699	RPS6KA4	O75676	772 aa		33.38	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	ZNF496	Q96IT1	587 aa	Predicted RBP	33.38	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	POLD1	P28340	1107 aa		33.37	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	TRAPPC3L	Q5T215	181 aa		33.36	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	KCNQ3	O43525	872 aa		33.35	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	RIPK4	P57078	832 aa		33.35	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	TAF7	Q15545	349 aa	Predicted RBP	33.35	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	GPR162	Q16538	588 aa		33.35	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	MSL1	Q68DK7	614 aa		33.35	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	RUNDC1	Q96C34	613 aa		33.35	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	CYP19A1	P11511	503 aa	Predicted RBP	33.34	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	TMPO	P42166	694 aa	Known RBP	33.34	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	FMNL2	Q96PY5	1086 aa		33.34	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	HEG1	Q9ULI3	1381 aa		33.34	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	CCDC184	Q52MB2	194 aa		33.33	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	INTS5	Q6P9B9	1019 aa	Known RBP	33.33	■■■□□ 2.93
KRTCAP3-205	ENST00000464699	ADRA2B	P18089	450 aa		33.32	■■■□□ 2.92
KRTCAP3-205	ENST00000464699	C1QTNF8	P60827	252 aa		33.32	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms