RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
GPATCH4-204ENST00000463513 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.29
GPATCH4-204ENST00000463513 NBPF14Q5TI25 921 aa13.21□□□□□ -0.29
GPATCH4-204ENST00000463513 LGR6Q9HBX8 967 aa13.21□□□□□ -0.29
GPATCH4-204ENST00000463513 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.29
GPATCH4-204ENST00000463513 UBR2Q8IWV8 1755 aa13.2□□□□□ -0.3
GPATCH4-204ENST00000463513 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
GPATCH4-204ENST00000463513 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
GPATCH4-204ENST00000463513 NFATC2IPQ8NCF5 419 aa13.2□□□□□ -0.3
GPATCH4-204ENST00000463513 ZNF831Q5JPB2 1677 aa13.19□□□□□ -0.3
GPATCH4-204ENST00000463513 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
GPATCH4-204ENST00000463513 MCM10Q7L590 875 aa13.19□□□□□ -0.3
GPATCH4-204ENST00000463513 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
GPATCH4-204ENST00000463513 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
GPATCH4-204ENST00000463513 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
GPATCH4-204ENST00000463513 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
GPATCH4-204ENST00000463513 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
GPATCH4-204ENST00000463513 HMGB2P26583 209 aaKnown RBP13.18□□□□□ -0.3
GPATCH4-204ENST00000463513 RIPK4P57078 832 aa13.18□□□□□ -0.3
GPATCH4-204ENST00000463513 PNISRQ8TF01 805 aaKnown RBP13.18□□□□□ -0.3
GPATCH4-204ENST00000463513 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
GPATCH4-204ENST00000463513 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
GPATCH4-204ENST00000463513 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
GPATCH4-204ENST00000463513 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
GPATCH4-204ENST00000463513 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
GPATCH4-204ENST00000463513 C4BP0C0L5 1744 aa13.17□□□□□ -0.3
GPATCH4-204ENST00000463513 TMPOP42166 694 aaKnown RBP13.17□□□□□ -0.3
GPATCH4-204ENST00000463513 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
GPATCH4-204ENST00000463513 IL17REQ8NFR9 667 aa13.17□□□□□ -0.3
GPATCH4-204ENST00000463513 ATG3Q9NT62 314 aa13.17□□□□□ -0.3
GPATCH4-204ENST00000463513 TJP1Q07157 1748 aa13.16□□□□□ -0.3
GPATCH4-204ENST00000463513 QSER1Q2KHR3 1735 aa13.16□□□□□ -0.3
GPATCH4-204ENST00000463513 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
GPATCH4-204ENST00000463513 CCER2I3L3R5 266 aa13.16□□□□□ -0.3
GPATCH4-204ENST00000463513 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
GPATCH4-204ENST00000463513 KCNQ4P56696 695 aa13.16□□□□□ -0.3
GPATCH4-204ENST00000463513 SIK1P57059 783 aa13.16□□□□□ -0.3
GPATCH4-204ENST00000463513 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
GPATCH4-204ENST00000463513 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
GPATCH4-204ENST00000463513 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
GPATCH4-204ENST00000463513 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
GPATCH4-204ENST00000463513 APAF1O14727 1248 aa13.15□□□□□ -0.3
GPATCH4-204ENST00000463513 ATP6V1AP38606 617 aa13.15□□□□□ -0.3
GPATCH4-204ENST00000463513 R3HDM1Q15032 1099 aaKnown RBP13.15□□□□□ -0.3
GPATCH4-204ENST00000463513 SLC39A6Q13433 755 aa13.14□□□□□ -0.31
GPATCH4-204ENST00000463513 PROM2Q8N271 834 aa13.14□□□□□ -0.31
GPATCH4-204ENST00000463513 AK7Q96M32 723 aa13.14□□□□□ -0.31
GPATCH4-204ENST00000463513 THUMPD2Q9BTF0 503 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-204ENST00000463513 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
GPATCH4-204ENST00000463513 LRRC4BQ9NT99 713 aa13.14□□□□□ -0.31
GPATCH4-204ENST00000463513 LAMB4A4D0S4 1761 aa13.14□□□□□ -0.31
GPATCH4-204ENST00000463513 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
GPATCH4-204ENST00000463513 CALD1Q05682 793 aaKnown RBP13.12□□□□□ -0.31
GPATCH4-204ENST00000463513 TAF7Q15545 349 aaPredicted RBP13.12□□□□□ -0.31
GPATCH4-204ENST00000463513 ZNF790Q6PG37 636 aa13.12□□□□□ -0.31
GPATCH4-204ENST00000463513 MIER1Q8N108 512 aa13.12□□□□□ -0.31
GPATCH4-204ENST00000463513 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
GPATCH4-204ENST00000463513 SENP3-EIF4A1A0A087X0R7 540 aa13.11□□□□□ -0.31
GPATCH4-204ENST00000463513 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
GPATCH4-204ENST00000463513 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
GPATCH4-204ENST00000463513 FMNL2Q96PY5 1086 aa13.11□□□□□ -0.31
GPATCH4-204ENST00000463513 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
GPATCH4-204ENST00000463513 LAS1LQ9Y4W2 734 aaKnown RBP13.11□□□□□ -0.31
GPATCH4-204ENST00000463513 CASZ1Q86V15 1759 aa13.11□□□□□ -0.31
GPATCH4-204ENST00000463513 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
GPATCH4-204ENST00000463513 MSH5O43196 834 aa13.1□□□□□ -0.31
GPATCH4-204ENST00000463513 ITPK1Q13572 414 aa13.1□□□□□ -0.31
GPATCH4-204ENST00000463513 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
GPATCH4-204ENST00000463513 HEG1Q9ULI3 1381 aa13.09□□□□□ -0.31
GPATCH4-204ENST00000463513 GNPATO15228 680 aa13.09□□□□□ -0.31
GPATCH4-204ENST00000463513 ZNF496Q96IT1 587 aaPredicted RBP13.09□□□□□ -0.31
GPATCH4-204ENST00000463513 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
GPATCH4-204ENST00000463513 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
GPATCH4-204ENST00000463513 SALL2Q9Y467 1007 aaPredicted RBP13.09□□□□□ -0.31
GPATCH4-204ENST00000463513 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
GPATCH4-204ENST00000463513 PHF14O94880 888 aa13.08□□□□□ -0.32
GPATCH4-204ENST00000463513 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
GPATCH4-204ENST00000463513 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
GPATCH4-204ENST00000463513 CNTNAP4Q9C0A0 1308 aa13.08□□□□□ -0.32
GPATCH4-204ENST00000463513 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
GPATCH4-204ENST00000463513 STARD3NLO95772 234 aa13.07□□□□□ -0.32
GPATCH4-204ENST00000463513 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
GPATCH4-204ENST00000463513 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
GPATCH4-204ENST00000463513 KCNQ3O43525 872 aa13.06□□□□□ -0.32
GPATCH4-204ENST00000463513 CRKLP46109 303 aaKnown RBP13.06□□□□□ -0.32
GPATCH4-204ENST00000463513 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
GPATCH4-204ENST00000463513 TEX13AQ9BXU3 409 aaPredicted RBP13.06□□□□□ -0.32
GPATCH4-204ENST00000463513 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
GPATCH4-204ENST00000463513 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
GPATCH4-204ENST00000463513 GNAI1P63096 354 aa13.05□□□□□ -0.32
GPATCH4-204ENST00000463513 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
GPATCH4-204ENST00000463513 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
GPATCH4-204ENST00000463513 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
GPATCH4-204ENST00000463513 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
GPATCH4-204ENST00000463513 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
GPATCH4-204ENST00000463513 LRP5O75197 1615 aa13.05□□□□□ -0.32
GPATCH4-204ENST00000463513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
GPATCH4-204ENST00000463513 SSFA2P28290 1259 aa13.04□□□□□ -0.32
GPATCH4-204ENST00000463513 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
GPATCH4-204ENST00000463513 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms