RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 OFD1O75665 1012 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 BCAR3O75815 825 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 PDE3AQ14432 1141 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 MORC1Q86VD1 984 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 MAP7D2Q96T17 732 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 GGNBP2Q9H3C7 697 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 ROBO1Q9Y6N7 1651 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 IQSEC2Q5JU85 1478 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 NME9Q86XW9 330 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
SHQ1-203ENST00000463369 RIPK4P57078 832 aa10.8□□□□□ -0.68
SHQ1-203ENST00000463369 AAMPQ13685 434 aa10.8□□□□□ -0.68
SHQ1-203ENST00000463369 WDR43Q15061 677 aaKnown RBP eCLIP10.8□□□□□ -0.68
SHQ1-203ENST00000463369 BRINP3Q76B58 766 aa10.8□□□□□ -0.68
SHQ1-203ENST00000463369 KIAA1522Q9P206 1035 aaPredicted RBP10.8□□□□□ -0.68
SHQ1-203ENST00000463369 PPP2R1AP30153 589 aa10.8□□□□□ -0.68
SHQ1-203ENST00000463369 GAS2L3Q86XJ1 694 aa10.8□□□□□ -0.68
SHQ1-203ENST00000463369 OVOS2A0A0J9YW53 1432 aa10.79□□□□□ -0.68
SHQ1-203ENST00000463369 OVOS2Q6IE36 1432 aa10.79□□□□□ -0.68
SHQ1-203ENST00000463369 LTN1O94822 1766 aa10.79□□□□□ -0.68
SHQ1-203ENST00000463369 USP31Q70CQ4 1352 aa10.79□□□□□ -0.68
SHQ1-203ENST00000463369 NPHP3Q7Z494 1330 aa10.79□□□□□ -0.68
SHQ1-203ENST00000463369 KRT28Q7Z3Y7 464 aa10.79□□□□□ -0.68
SHQ1-203ENST00000463369 PXDNQ92626 1479 aa10.79□□□□□ -0.68
SHQ1-203ENST00000463369 MARCH6O60337 910 aa10.78□□□□□ -0.68
SHQ1-203ENST00000463369 KCNA1Q09470 495 aa10.78□□□□□ -0.68
SHQ1-203ENST00000463369 ZSCAN30Q86W11 494 aa10.78□□□□□ -0.68
SHQ1-203ENST00000463369 COG3Q96JB2 828 aa10.78□□□□□ -0.68
SHQ1-203ENST00000463369 PPP1R9BQ96SB3 815 aa10.78□□□□□ -0.68
SHQ1-203ENST00000463369 ZRANB1Q9UGI0 708 aa10.78□□□□□ -0.68
SHQ1-203ENST00000463369 NCLP19338 710 aaKnown RBP10.78□□□□□ -0.68
SHQ1-203ENST00000463369 CCDC173Q0VFZ6 552 aa10.78□□□□□ -0.68
SHQ1-203ENST00000463369 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.78□□□□□ -0.68
SHQ1-203ENST00000463369 CRYBG1Q9Y4K1 1723 aa10.77□□□□□ -0.68
SHQ1-203ENST00000463369 ABTB2Q8N961 1025 aa10.77□□□□□ -0.69
SHQ1-203ENST00000463369 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
SHQ1-203ENST00000463369 SBNO1A3KN83 1393 aa10.77□□□□□ -0.69
SHQ1-203ENST00000463369 XPCQ01831 940 aaPredicted RBP10.77□□□□□ -0.69
SHQ1-203ENST00000463369 SKOR2Q2VWA4 1001 aaPredicted RBP10.77□□□□□ -0.69
SHQ1-203ENST00000463369 SMAP1Q8IYB5 467 aaPredicted RBP10.77□□□□□ -0.69
SHQ1-203ENST00000463369 DDX17Q92841 729 aaKnown RBP10.77□□□□□ -0.69
SHQ1-203ENST00000463369 DDIT3P35638 169 aa10.76□□□□□ -0.69
SHQ1-203ENST00000463369 TNNT2P45379 298 aaPredicted RBP10.76□□□□□ -0.69
SHQ1-203ENST00000463369 C22orf23Q9BZE7 217 aa10.76□□□□□ -0.69
SHQ1-203ENST00000463369 AATKQ6ZMQ8 1374 aa10.76□□□□□ -0.69
SHQ1-203ENST00000463369 AHDC1Q5TGY3 1603 aaPredicted RBP10.76□□□□□ -0.69
SHQ1-203ENST00000463369 PHLPP1O60346 1717 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 ANKRD62A6NC57 917 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 TOM1O60784 492 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 NLRP6P59044 892 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 EXOC8Q8IYI6 725 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 COG6Q9Y2V7 657 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 SHPRHQ149N8 1683 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 PHRF1Q9P1Y6 1649 aaKnown RBP10.75□□□□□ -0.69
SHQ1-203ENST00000463369 SOS2Q07890 1332 aaPredicted RBP10.75□□□□□ -0.69
SHQ1-203ENST00000463369 ZC3H4Q9UPT8 1303 aaKnown RBP10.75□□□□□ -0.69
SHQ1-203ENST00000463369 CARNS1A5YM72 827 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 PATL2C9JE40 543 aaKnown RBP10.75□□□□□ -0.69
SHQ1-203ENST00000463369 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
SHQ1-203ENST00000463369 CERKQ8TCT0 537 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 PANK1Q8TE04 598 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 PLCD4Q9BRC7 762 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 RYDENQ9NUL5 291 aaKnown RBP10.75□□□□□ -0.69
SHQ1-203ENST00000463369 PDZRN3Q9UPQ7 1066 aa10.75□□□□□ -0.69
SHQ1-203ENST00000463369 PTMSP20962 102 aa10.74□□□□□ -0.69
SHQ1-203ENST00000463369 FAM13BQ9NYF5 915 aa10.74□□□□□ -0.69
SHQ1-203ENST00000463369 IVNS1ABPQ9Y6Y0 642 aa10.74□□□□□ -0.69
SHQ1-203ENST00000463369 RGPD5Q99666 1765 aa10.74□□□□□ -0.69
SHQ1-203ENST00000463369 TNS3Q68CZ2 1445 aa10.74□□□□□ -0.69
SHQ1-203ENST00000463369 SLIT3O75094 1523 aa10.74□□□□□ -0.69
SHQ1-203ENST00000463369 PEAK1Q9H792 1746 aa10.74□□□□□ -0.69
SHQ1-203ENST00000463369 MSNP26038 577 aaKnown RBP10.73□□□□□ -0.69
SHQ1-203ENST00000463369 MTHFSP49914 203 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 MTERF4Q7Z6M4 381 aaKnown RBP10.73□□□□□ -0.69
SHQ1-203ENST00000463369 TNPO1Q92973 898 aaKnown RBP10.73□□□□□ -0.69
SHQ1-203ENST00000463369 DRC1Q96MC2 740 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 STK24Q9Y6E0 443 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 ABCA3Q99758 1704 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 SPATA31A3Q5VYP0 1347 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 FBLN1P23142 703 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 E2F4Q16254 413 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 NUTM2GQ5VZR2 741 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 SND1Q7KZF4 910 aaKnown RBP eCLIP10.73□□□□□ -0.69
SHQ1-203ENST00000463369 HSCBQ8IWL3 235 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 GBP4Q96PP9 640 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 PCDHB15Q9Y5E8 787 aa10.73□□□□□ -0.69
SHQ1-203ENST00000463369 MED1Q15648 1581 aaPredicted RBP10.72□□□□□ -0.69
SHQ1-203ENST00000463369 NASPP49321 788 aaPredicted RBP10.72□□□□□ -0.69
SHQ1-203ENST00000463369 POLKQ9UBT6 870 aa10.72□□□□□ -0.69
SHQ1-203ENST00000463369 NFAT5O94916 1531 aa10.72□□□□□ -0.69
SHQ1-203ENST00000463369 APAF1O14727 1248 aa10.72□□□□□ -0.69
SHQ1-203ENST00000463369 HS1BP3Q53T59 392 aa10.72□□□□□ -0.69
SHQ1-203ENST00000463369 ANP32BQ92688 251 aaKnown RBP10.72□□□□□ -0.69
SHQ1-203ENST00000463369 MRRFQ96E11 262 aaKnown RBP10.72□□□□□ -0.69
SHQ1-203ENST00000463369 R3HCC1Q9Y3T6 440 aaKnown RBP10.72□□□□□ -0.69
SHQ1-203ENST00000463369 COL16A1Q07092 1604 aaPredicted RBP10.71□□□□□ -0.69
SHQ1-203ENST00000463369 ARHGEF10O15013 1369 aa10.71□□□□□ -0.69
SHQ1-203ENST00000463369 PNPLA6Q8IY17 1366 aa10.71□□□□□ -0.69
SHQ1-203ENST00000463369 ANAPC15P60006 121 aa10.71□□□□□ -0.69
SHQ1-203ENST00000463369 GPIHBP1Q8IV16 184 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms