RNA–Protein interactions for RNA: ENST00000462844.5

SPIN1-202, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-202ENST00000462844 COL24A1Q17RW2 1714 aa28.43■■■□□ 2.14
SPIN1-202ENST00000462844 TUBGCP6Q96RT7 1819 aa28.43■■■□□ 2.14
SPIN1-202ENST00000462844 C4BP0C0L5 1744 aa28.43■■■□□ 2.14
SPIN1-202ENST00000462844 SSFA2P28290 1259 aa28.42■■■□□ 2.14
SPIN1-202ENST00000462844 ZNF831Q5JPB2 1677 aa28.41■■■□□ 2.14
SPIN1-202ENST00000462844 HMOX1P09601 288 aa28.4■■■□□ 2.14
SPIN1-202ENST00000462844 COL3A1P02461 1466 aaPredicted RBP28.39■■■□□ 2.13
SPIN1-202ENST00000462844 LINC00116Q8NCU8 138 aa28.38■■■□□ 2.13
SPIN1-202ENST00000462844 CNGB1Q14028 1251 aaPredicted RBP28.37■■■□□ 2.13
SPIN1-202ENST00000462844 NFATC2IPQ8NCF5 419 aa28.37■■■□□ 2.13
SPIN1-202ENST00000462844 RBM42Q9BTD8 480 aaKnown RBP28.37■■■□□ 2.13
SPIN1-202ENST00000462844 NUDCQ9Y266 331 aa28.37■■■□□ 2.13
SPIN1-202ENST00000462844 U2SURPO15042 1029 aaKnown RBP28.36■■■□□ 2.13
SPIN1-202ENST00000462844 ITPK1Q13572 414 aa28.36■■■□□ 2.13
SPIN1-202ENST00000462844 RC3H1Q5TC82 1133 aaKnown RBP28.36■■■□□ 2.13
SPIN1-202ENST00000462844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.35■■■□□ 2.13
SPIN1-202ENST00000462844 SLC52A2Q9HAB3 445 aa28.34■■■□□ 2.13
SPIN1-202ENST00000462844 GNPATO15228 680 aa28.33■■■□□ 2.13
SPIN1-202ENST00000462844 MTHFSDQ2M296 383 aaKnown RBP28.33■■■□□ 2.13
SPIN1-202ENST00000462844 ADRA2BP18089 450 aa28.32■■■□□ 2.12
SPIN1-202ENST00000462844 PPP2R1AP30153 589 aa28.32■■■□□ 2.12
SPIN1-202ENST00000462844 GAS2L2Q8NHY3 880 aa28.32■■■□□ 2.12
SPIN1-202ENST00000462844 CNTNAP4Q9C0A0 1308 aa28.32■■■□□ 2.12
SPIN1-202ENST00000462844 UBR3Q6ZT12 1888 aa28.32■■■□□ 2.12
SPIN1-202ENST00000462844 RNMTO43148 476 aaKnown RBP28.31■■■□□ 2.12
SPIN1-202ENST00000462844 RTCBQ9Y3I0 505 aaKnown RBP28.31■■■□□ 2.12
SPIN1-202ENST00000462844 SCN11AQ9UI33 1791 aa28.31■■■□□ 2.12
SPIN1-202ENST00000462844 PHF14O94880 888 aa28.3■■■□□ 2.12
SPIN1-202ENST00000462844 MRC1P22897 1456 aa28.29■■■□□ 2.12
SPIN1-202ENST00000462844 SLC4A9Q96Q91 983 aa28.29■■■□□ 2.12
SPIN1-202ENST00000462844 PTCD1O75127 700 aaKnown RBP28.28■■■□□ 2.12
SPIN1-202ENST00000462844 LGR6Q9HBX8 967 aa28.28■■■□□ 2.12
SPIN1-202ENST00000462844 TRAPPC3LQ5T215 181 aa28.27■■■□□ 2.12
SPIN1-202ENST00000462844 MSL1Q68DK7 614 aa28.27■■■□□ 2.12
SPIN1-202ENST00000462844 CD2APQ9Y5K6 639 aa28.27■■■□□ 2.12
SPIN1-202ENST00000462844 RPS6KA4O75676 772 aa28.26■■■□□ 2.11
SPIN1-202ENST00000462844 GNAT3A8MTJ3 354 aa28.25■■■□□ 2.11
SPIN1-202ENST00000462844 FCHSD2O94868 740 aa28.25■■■□□ 2.11
SPIN1-202ENST00000462844 AMIGO3Q86WK7 504 aa28.25■■■□□ 2.11
SPIN1-202ENST00000462844 KLHL34Q8N239 644 aa28.25■■■□□ 2.11
SPIN1-202ENST00000462844 ADAMTS7Q9UKP4 1686 aa28.25■■■□□ 2.11
SPIN1-202ENST00000462844 YY1P25490 414 aa28.24■■■□□ 2.11
SPIN1-202ENST00000462844 CICQ96RK0 1608 aaPredicted RBP28.24■■■□□ 2.11
SPIN1-202ENST00000462844 VSIG10Q8N0Z9 540 aa28.22■■■□□ 2.11
SPIN1-202ENST00000462844 NLGN1Q8N2Q7 840 aa28.22■■■□□ 2.11
SPIN1-202ENST00000462844 RSPH6AQ9H0K4 717 aa28.22■■■□□ 2.11
SPIN1-202ENST00000462844 COL5A3P25940 1745 aaPredicted RBP28.21■■■□□ 2.11
SPIN1-202ENST00000462844 U2AF1L5P0DN76 240 aaPredicted RBP28.21■■■□□ 2.11
SPIN1-202ENST00000462844 PRKAR2BP31323 418 aa28.21■■■□□ 2.11
SPIN1-202ENST00000462844 U2AF1Q01081 240 aaKnown RBP eCLIP28.21■■■□□ 2.11
SPIN1-202ENST00000462844 RFC4P35249 363 aa28.2■■■□□ 2.1
SPIN1-202ENST00000462844 CRKLP46109 303 aaKnown RBP28.2■■■□□ 2.1
SPIN1-202ENST00000462844 TEFQ10587 303 aa28.2■■■□□ 2.1
SPIN1-202ENST00000462844 GPR162Q16538 588 aa28.2■■■□□ 2.1
SPIN1-202ENST00000462844 ARHGEF1Q92888 912 aaKnown RBP28.19■■■□□ 2.1
SPIN1-202ENST00000462844 TTC5Q8N0Z6 440 aa28.17■■■□□ 2.1
SPIN1-202ENST00000462844 SMIM5Q71RC9 77 aa28.16■■■□□ 2.1
SPIN1-202ENST00000462844 IL17REQ8NFR9 667 aa28.16■■■□□ 2.1
SPIN1-202ENST00000462844 NLGN2Q8NFZ4 835 aa28.15■■■□□ 2.1
SPIN1-202ENST00000462844 PHACTR3Q96KR7 559 aa28.15■■■□□ 2.1
SPIN1-202ENST00000462844 CEMIPQ8WUJ3 1361 aa28.14■■■□□ 2.1
SPIN1-202ENST00000462844 GRIN3BO60391 1043 aa28.14■■■□□ 2.1
SPIN1-202ENST00000462844 NEFMP07197 916 aa28.14■■■□□ 2.1
SPIN1-202ENST00000462844 SLC39A6Q13433 755 aa28.14■■■□□ 2.1
SPIN1-202ENST00000462844 RALBP1Q15311 655 aa28.14■■■□□ 2.1
SPIN1-202ENST00000462844 CCDC87Q9NVE4 849 aa28.14■■■□□ 2.1
SPIN1-202ENST00000462844 HTATSF1O43719 755 aaKnown RBP28.13■■■□□ 2.09
SPIN1-202ENST00000462844 TEX13AQ9BXU3 409 aaPredicted RBP28.13■■■□□ 2.09
SPIN1-202ENST00000462844 INTS5Q6P9B9 1019 aaKnown RBP28.12■■■□□ 2.09
SPIN1-202ENST00000462844 RTF1Q92541 710 aaKnown RBP28.12■■■□□ 2.09
SPIN1-202ENST00000462844 PNNQ9H307 717 aaKnown RBP28.12■■■□□ 2.09
SPIN1-202ENST00000462844 TJP1Q07157 1748 aa28.12■■■□□ 2.09
SPIN1-202ENST00000462844 MMP10P09238 476 aa28.11■■■□□ 2.09
SPIN1-202ENST00000462844 CYP19A1P11511 503 aaPredicted RBP28.11■■■□□ 2.09
SPIN1-202ENST00000462844 GYS1P13807 737 aa28.11■■■□□ 2.09
SPIN1-202ENST00000462844 ZNF790Q6PG37 636 aa28.11■■■□□ 2.09
SPIN1-202ENST00000462844 DNAJC10Q8IXB1 793 aa28.11■■■□□ 2.09
SPIN1-202ENST00000462844 KCPQ6ZWJ8 1503 aa28.11■■■□□ 2.09
SPIN1-202ENST00000462844 VIRMAQ69YN4 1812 aaKnown RBP28.11■■■□□ 2.09
SPIN1-202ENST00000462844 STARD3NLO95772 234 aa28.1■■■□□ 2.09
SPIN1-202ENST00000462844 MYH14Q7Z406 1995 aaKnown RBP28.09■■■□□ 2.09
SPIN1-202ENST00000462844 PELP1Q8IZL8 1130 aaKnown RBP28.08■■■□□ 2.09
SPIN1-202ENST00000462844 PARP3Q9Y6F1 533 aa28.07■■■□□ 2.08
SPIN1-202ENST00000462844 USP42Q9H9J4 1324 aaKnown RBP28.07■■■□□ 2.08
SPIN1-202ENST00000462844 FMNL2Q96PY5 1086 aa28.06■■■□□ 2.08
SPIN1-202ENST00000462844 SOS1Q07889 1333 aaPredicted RBP28.06■■■□□ 2.08
SPIN1-202ENST00000462844 UBR2Q8IWV8 1755 aa28.06■■■□□ 2.08
SPIN1-202ENST00000462844 ZPR1O75312 459 aa28.05■■■□□ 2.08
SPIN1-202ENST00000462844 HEG1Q9ULI3 1381 aa28.04■■■□□ 2.08
SPIN1-202ENST00000462844 BTBD11A6QL63 1104 aa28.04■■■□□ 2.08
SPIN1-202ENST00000462844 TGFB2P61812 414 aa28.04■■■□□ 2.08
SPIN1-202ENST00000462844 ZNF496Q96IT1 587 aaPredicted RBP28.04■■■□□ 2.08
SPIN1-202ENST00000462844 CHD4Q14839 1912 aa28.03■■■□□ 2.08
SPIN1-202ENST00000462844 DDX10Q13206 875 aaKnown RBP28.03■■■□□ 2.08
SPIN1-202ENST00000462844 C4AP0C0L4 1744 aa28.02■■■□□ 2.08
SPIN1-202ENST00000462844 SIPA1L3O60292 1781 aaPredicted RBP28.01■■■□□ 2.08
SPIN1-202ENST00000462844 YBX3P16989 372 aaKnown RBP eCLIP28.01■■■□□ 2.07
SPIN1-202ENST00000462844 ZEB1P37275 1124 aaPredicted RBP28.01■■■□□ 2.07
SPIN1-202ENST00000462844 COL15A1P39059 1388 aa28■■■□□ 2.07
SPIN1-202ENST00000462844 A0A087WZG4 1122 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms