RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 ADAMTS7Q9UKP4 1686 aa23.33■■□□□ 1.32
ATPAF2-202ENST00000462733 TEFQ10587 303 aa23.32■■□□□ 1.32
ATPAF2-202ENST00000462733 KRT27Q7Z3Y8 459 aa23.32■■□□□ 1.32
ATPAF2-202ENST00000462733 CDCA7LQ96GN5 454 aa23.32■■□□□ 1.32
ATPAF2-202ENST00000462733 CALD1Q05682 793 aaKnown RBP23.31■■□□□ 1.32
ATPAF2-202ENST00000462733 TOGARAM1Q9Y4F4 1720 aa23.31■■□□□ 1.32
ATPAF2-202ENST00000462733 SPINK5Q9NQ38 1064 aaPredicted RBP23.3■■□□□ 1.32
ATPAF2-202ENST00000462733 CABP4P57796 275 aa23.29■■□□□ 1.32
ATPAF2-202ENST00000462733 NFATC2IPQ8NCF5 419 aa23.29■■□□□ 1.32
ATPAF2-202ENST00000462733 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
ATPAF2-202ENST00000462733 SLC52A2Q9HAB3 445 aa23.29■■□□□ 1.32
ATPAF2-202ENST00000462733 DOT1LQ8TEK3 1739 aa23.29■■□□□ 1.32
ATPAF2-202ENST00000462733 ERVV-2B6SEH9 535 aa23.28■■□□□ 1.32
ATPAF2-202ENST00000462733 SYTL4Q96C24 671 aaPredicted RBP23.28■■□□□ 1.32
ATPAF2-202ENST00000462733 MIS18AQ9NYP9 233 aa23.28■■□□□ 1.32
ATPAF2-202ENST00000462733 ITGB4P16144 1822 aa23.27■■□□□ 1.32
ATPAF2-202ENST00000462733 IL16Q14005 1332 aa23.27■■□□□ 1.32
ATPAF2-202ENST00000462733 TAF7Q15545 349 aaPredicted RBP23.27■■□□□ 1.32
ATPAF2-202ENST00000462733 IFT57Q9NWB7 429 aa23.26■■□□□ 1.31
ATPAF2-202ENST00000462733 SIPA1L3O60292 1781 aaPredicted RBP23.26■■□□□ 1.31
ATPAF2-202ENST00000462733 E9PSI1 815 aa23.25■■□□□ 1.31
ATPAF2-202ENST00000462733 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
ATPAF2-202ENST00000462733 GNAI1P63096 354 aa23.25■■□□□ 1.31
ATPAF2-202ENST00000462733 SLFN5Q08AF3 891 aa23.25■■□□□ 1.31
ATPAF2-202ENST00000462733 CFAP44Q96MT7 982 aa23.25■■□□□ 1.31
ATPAF2-202ENST00000462733 TMOD3Q9NYL9 352 aa23.25■■□□□ 1.31
ATPAF2-202ENST00000462733 MRC1P22897 1456 aa23.25■■□□□ 1.31
ATPAF2-202ENST00000462733 TSR2Q969E8 191 aaKnown RBP23.25■■□□□ 1.31
ATPAF2-202ENST00000462733 BTBD11A6QL63 1104 aa23.24■■□□□ 1.31
ATPAF2-202ENST00000462733 ZNF853P0CG23 659 aa23.24■■□□□ 1.31
ATPAF2-202ENST00000462733 TSPYL4Q9UJ04 414 aa23.24■■□□□ 1.31
ATPAF2-202ENST00000462733 EP400Q96L91 3159 aa23.24■■□□□ 1.31
ATPAF2-202ENST00000462733 MBIPQ9NS73 344 aa23.23■■□□□ 1.31
ATPAF2-202ENST00000462733 CHL1O00533 1208 aa23.22■■□□□ 1.31
ATPAF2-202ENST00000462733 MSH5O43196 834 aa23.22■■□□□ 1.31
ATPAF2-202ENST00000462733 KCNQ2O43526 872 aa23.22■■□□□ 1.31
ATPAF2-202ENST00000462733 MYH16Q9H6N6 1097 aa23.22■■□□□ 1.31
ATPAF2-202ENST00000462733 FAM196AQ6ZSG2 479 aa23.22■■□□□ 1.31
ATPAF2-202ENST00000462733 PIGBQ92521 554 aa23.22■■□□□ 1.31
ATPAF2-202ENST00000462733 SLC39A6Q13433 755 aa23.21■■□□□ 1.31
ATPAF2-202ENST00000462733 SBF2Q86WG5 1849 aa23.21■■□□□ 1.31
ATPAF2-202ENST00000462733 BCL9O00512 1426 aa23.2■■□□□ 1.3
ATPAF2-202ENST00000462733 KCNQ3O43525 872 aa23.19■■□□□ 1.3
ATPAF2-202ENST00000462733 DUSP27Q5VZP5 1158 aa23.19■■□□□ 1.3
ATPAF2-202ENST00000462733 TRMT2AQ8IZ69 625 aaKnown RBP23.19■■□□□ 1.3
ATPAF2-202ENST00000462733 KDM3BQ7LBC6 1761 aa23.18■■□□□ 1.3
ATPAF2-202ENST00000462733 PTF1AQ7RTS3 328 aa23.18■■□□□ 1.3
ATPAF2-202ENST00000462733 BABAM1Q9NWV8 329 aa23.18■■□□□ 1.3
ATPAF2-202ENST00000462733 ZNF790Q6PG37 636 aa23.16■■□□□ 1.3
ATPAF2-202ENST00000462733 EXOC6Q8TAG9 804 aa23.16■■□□□ 1.3
ATPAF2-202ENST00000462733 NHSQ6T4R5 1651 aa23.16■■□□□ 1.3
ATPAF2-202ENST00000462733 TTC5Q8N0Z6 440 aa23.16■■□□□ 1.3
ATPAF2-202ENST00000462733 ASAP1Q9ULH1 1129 aa23.16■■□□□ 1.3
ATPAF2-202ENST00000462733 TRIM37O94972 964 aa23.14■■□□□ 1.3
ATPAF2-202ENST00000462733 EXOSC9Q06265 439 aaKnown RBP23.14■■□□□ 1.3
ATPAF2-202ENST00000462733 ATG3Q9NT62 314 aa23.14■■□□□ 1.3
ATPAF2-202ENST00000462733 KRT24Q2M2I5 525 aa23.13■■□□□ 1.29
ATPAF2-202ENST00000462733 ERICH6Q7L0X2 663 aa23.13■■□□□ 1.29
ATPAF2-202ENST00000462733 BTAF1O14981 1849 aa23.13■■□□□ 1.29
ATPAF2-202ENST00000462733 TCERG1O14776 1098 aaKnown RBP23.13■■□□□ 1.29
ATPAF2-202ENST00000462733 PAPPAQ13219 1627 aa23.12■■□□□ 1.29
ATPAF2-202ENST00000462733 ELL2O00472 640 aaPredicted RBP23.12■■□□□ 1.29
ATPAF2-202ENST00000462733 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
ATPAF2-202ENST00000462733 BCL11BQ9C0K0 894 aaPredicted RBP23.12■■□□□ 1.29
ATPAF2-202ENST00000462733 PTCD1O75127 700 aaKnown RBP23.11■■□□□ 1.29
ATPAF2-202ENST00000462733 C8orf58Q8NAV2 365 aa23.11■■□□□ 1.29
ATPAF2-202ENST00000462733 ZNF496Q96IT1 587 aaPredicted RBP23.11■■□□□ 1.29
ATPAF2-202ENST00000462733 MS4A1P11836 297 aa23.09■■□□□ 1.29
ATPAF2-202ENST00000462733 TSPYL6Q8N831 410 aa23.09■■□□□ 1.29
ATPAF2-202ENST00000462733 UBR2Q8IWV8 1755 aa23.08■■□□□ 1.29
ATPAF2-202ENST00000462733 FMNL2Q96PY5 1086 aa23.08■■□□□ 1.29
ATPAF2-202ENST00000462733 RBM42Q9BTD8 480 aaKnown RBP23.08■■□□□ 1.29
ATPAF2-202ENST00000462733 KCPQ6ZWJ8 1503 aa23.07■■□□□ 1.28
ATPAF2-202ENST00000462733 PALLDQ8WX93 1383 aa23.07■■□□□ 1.28
ATPAF2-202ENST00000462733 TWISTNBQ3B726 338 aaPredicted RBP23.07■■□□□ 1.28
ATPAF2-202ENST00000462733 SMARCC1Q92922 1105 aaPredicted RBP23.06■■□□□ 1.28
ATPAF2-202ENST00000462733 PRAMEF22A3QJZ6 481 aa23.05■■□□□ 1.28
ATPAF2-202ENST00000462733 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.05■■□□□ 1.28
ATPAF2-202ENST00000462733 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
ATPAF2-202ENST00000462733 GIGYF1O75420 1035 aaPredicted RBP23.04■■□□□ 1.28
ATPAF2-202ENST00000462733 ANP32AP39687 249 aaKnown RBP23.04■■□□□ 1.28
ATPAF2-202ENST00000462733 VAMP4O75379 141 aa23.03■■□□□ 1.28
ATPAF2-202ENST00000462733 SNRPA1P09661 255 aaKnown RBP23.02■■□□□ 1.28
ATPAF2-202ENST00000462733 C5P01031 1676 aa23.02■■□□□ 1.28
ATPAF2-202ENST00000462733 LOC102724428A0A0B4J2F2 783 aa23.02■■□□□ 1.28
ATPAF2-202ENST00000462733 APBA3O96018 575 aa23.02■■□□□ 1.28
ATPAF2-202ENST00000462733 SIK1P57059 783 aa23.02■■□□□ 1.28
ATPAF2-202ENST00000462733 NECTIN2Q92692 538 aa23.02■■□□□ 1.28
ATPAF2-202ENST00000462733 SLC4A9Q96Q91 983 aa23.02■■□□□ 1.28
ATPAF2-202ENST00000462733 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
ATPAF2-202ENST00000462733 CRBNQ96SW2 442 aa23.01■■□□□ 1.27
ATPAF2-202ENST00000462733 TNS1Q9HBL0 1735 aaKnown RBP23.01■■□□□ 1.27
ATPAF2-202ENST00000462733 ATP6V1AP38606 617 aa22.99■■□□□ 1.27
ATPAF2-202ENST00000462733 CT47B1P0C2W7 299 aaPredicted RBP22.99■■□□□ 1.27
ATPAF2-202ENST00000462733 KCNQ4P56696 695 aa22.99■■□□□ 1.27
ATPAF2-202ENST00000462733 DNAJC10Q8IXB1 793 aa22.99■■□□□ 1.27
ATPAF2-202ENST00000462733 NOP58Q9Y2X3 529 aaKnown RBP22.99■■□□□ 1.27
ATPAF2-202ENST00000462733 USP16Q9Y5T5 823 aa22.99■■□□□ 1.27
ATPAF2-202ENST00000462733 HOXB7P09629 217 aa22.98■■□□□ 1.27
ATPAF2-202ENST00000462733 HDGFL1Q5TGJ6 251 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms