RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 RASSF7Q02833 373 aa9.7□□□□□ -0.86
THUMPD3-207ENST00000461636 TIMMDC1Q9NPL8 285 aa9.7□□□□□ -0.86
THUMPD3-207ENST00000461636 RAB6BQ9NRW1 208 aa9.7□□□□□ -0.86
THUMPD3-207ENST00000461636 KIF21AQ7Z4S6 1674 aa9.7□□□□□ -0.86
THUMPD3-207ENST00000461636 GTF2E1P29083 439 aaPredicted RBP9.69□□□□□ -0.86
THUMPD3-207ENST00000461636 GSK3AP49840 483 aa9.69□□□□□ -0.86
THUMPD3-207ENST00000461636 CNKSR1Q969H4 720 aa9.69□□□□□ -0.86
THUMPD3-207ENST00000461636 ENAMQ9NRM1 1142 aa9.69□□□□□ -0.86
THUMPD3-207ENST00000461636 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
THUMPD3-207ENST00000461636 DBN1Q16643 649 aa9.68□□□□□ -0.86
THUMPD3-207ENST00000461636 SCARF2Q96GP6 870 aaPredicted RBP9.68□□□□□ -0.86
THUMPD3-207ENST00000461636 ESYT1Q9BSJ8 1104 aa9.68□□□□□ -0.86
THUMPD3-207ENST00000461636 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
THUMPD3-207ENST00000461636 GPR25O00155 361 aa9.67□□□□□ -0.86
THUMPD3-207ENST00000461636 LYPD4Q6UWN0 246 aa9.67□□□□□ -0.86
THUMPD3-207ENST00000461636 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
THUMPD3-207ENST00000461636 GTPBP3Q969Y2 492 aaKnown RBP9.67□□□□□ -0.86
THUMPD3-207ENST00000461636 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
THUMPD3-207ENST00000461636 DOLKQ9UPQ8 538 aa9.67□□□□□ -0.86
THUMPD3-207ENST00000461636 PDS5BQ9NTI5 1447 aa9.66□□□□□ -0.86
THUMPD3-207ENST00000461636 F11P03951 625 aa9.66□□□□□ -0.86
THUMPD3-207ENST00000461636 CELA2BP08218 269 aaPredicted RBP9.66□□□□□ -0.86
THUMPD3-207ENST00000461636 SLFNL1Q499Z3 407 aa9.66□□□□□ -0.86
THUMPD3-207ENST00000461636 ESCO1Q5FWF5 840 aa9.66□□□□□ -0.86
THUMPD3-207ENST00000461636 NUCKS1Q9H1E3 243 aaKnown RBP9.66□□□□□ -0.86
THUMPD3-207ENST00000461636 NSFL1CQ9UNZ2 370 aaKnown RBP9.66□□□□□ -0.86
THUMPD3-207ENST00000461636 IGF1RP08069 1367 aa9.65□□□□□ -0.86
THUMPD3-207ENST00000461636 IL2RAP01589 272 aa9.65□□□□□ -0.86
THUMPD3-207ENST00000461636 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
THUMPD3-207ENST00000461636 KANK3Q6NY19 840 aa9.65□□□□□ -0.86
THUMPD3-207ENST00000461636 ZSCAN10Q96SZ4 725 aaPredicted RBP9.65□□□□□ -0.86
THUMPD3-207ENST00000461636 CDCA7Q9BWT1 371 aaPredicted RBP9.65□□□□□ -0.86
THUMPD3-207ENST00000461636 SUPT5HO00267 1087 aaKnown RBP9.64□□□□□ -0.87
THUMPD3-207ENST00000461636 IRS1P35568 1242 aa9.64□□□□□ -0.87
THUMPD3-207ENST00000461636 CENPCQ03188 943 aa9.64□□□□□ -0.87
THUMPD3-207ENST00000461636 USP4Q13107 963 aa9.64□□□□□ -0.87
THUMPD3-207ENST00000461636 RNF135Q8IUD6 432 aa9.64□□□□□ -0.87
THUMPD3-207ENST00000461636 ERCC6Q03468 1493 aa9.64□□□□□ -0.87
THUMPD3-207ENST00000461636 A0A1B0GTH6 734 aa9.63□□□□□ -0.87
THUMPD3-207ENST00000461636 MX2P20592 715 aa9.63□□□□□ -0.87
THUMPD3-207ENST00000461636 HOMEZQ8IX15 550 aa9.63□□□□□ -0.87
THUMPD3-207ENST00000461636 SIRT1Q96EB6 747 aa9.63□□□□□ -0.87
THUMPD3-207ENST00000461636 FANCD2Q9BXW9 1451 aa9.63□□□□□ -0.87
THUMPD3-207ENST00000461636 IRF5Q13568 498 aa9.62□□□□□ -0.87
THUMPD3-207ENST00000461636 TMEM214Q6NUQ4 689 aaKnown RBP9.62□□□□□ -0.87
THUMPD3-207ENST00000461636 XAGE2Q96GT9 111 aa9.62□□□□□ -0.87
THUMPD3-207ENST00000461636 DNMT3AQ9Y6K1 912 aaPredicted RBP9.62□□□□□ -0.87
THUMPD3-207ENST00000461636 PHF24Q9UPV7 400 aa9.61□□□□□ -0.87
THUMPD3-207ENST00000461636 HRH3Q9Y5N1 445 aa9.61□□□□□ -0.87
THUMPD3-207ENST00000461636 CEP164Q9UPV0 1460 aa9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 CSB-PGBD3P0DP91 1061 aa9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 BCRP11274 1271 aa9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 PHKA2P46019 1235 aa9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 LBRQ14739 615 aaKnown RBP9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 OXLD1Q5BKU9 147 aa9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 PGBD3Q8N328 593 aa9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 FHDC1Q9C0D6 1143 aaPredicted RBP9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 GPAMQ9HCL2 828 aa9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 WDR62O43379 1518 aa9.6□□□□□ -0.87
THUMPD3-207ENST00000461636 CUX2O14529 1486 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 PHF20L1A8MW92 1017 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 MAP2K3P46734 347 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 VAC14Q08AM6 782 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 WASHC4Q2M389 1173 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 PHTF2Q8N3S3 785 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 NEDD1Q8NHV4 660 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 CFHR5Q9BXR6 569 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 LRRC4BQ9NT99 713 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 MRC2Q9UBG0 1479 aa9.59□□□□□ -0.87
THUMPD3-207ENST00000461636 ABL2P42684 1182 aa9.58□□□□□ -0.88
THUMPD3-207ENST00000461636 TLR1Q15399 786 aa9.58□□□□□ -0.88
THUMPD3-207ENST00000461636 RHBDD1Q8TEB9 315 aa9.58□□□□□ -0.88
THUMPD3-207ENST00000461636 GDPD2Q9HCC8 539 aa9.58□□□□□ -0.88
THUMPD3-207ENST00000461636 FOXK2Q01167 660 aa9.57□□□□□ -0.88
THUMPD3-207ENST00000461636 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
THUMPD3-207ENST00000461636 C4orf17Q53FE4 359 aa9.57□□□□□ -0.88
THUMPD3-207ENST00000461636 EFHC2Q5JST6 749 aa9.57□□□□□ -0.88
THUMPD3-207ENST00000461636 ACDQ96AP0 544 aa9.57□□□□□ -0.88
THUMPD3-207ENST00000461636 ETNK1Q9HBU6 452 aa9.57□□□□□ -0.88
THUMPD3-207ENST00000461636 URB2Q14146 1524 aaKnown RBP9.56□□□□□ -0.88
THUMPD3-207ENST00000461636 SOX11P35716 441 aa9.56□□□□□ -0.88
THUMPD3-207ENST00000461636 MAP7D1Q3KQU3 841 aa9.56□□□□□ -0.88
THUMPD3-207ENST00000461636 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
THUMPD3-207ENST00000461636 IGHA1P01876 353 aa9.55□□□□□ -0.88
THUMPD3-207ENST00000461636 SEMA3FQ13275 785 aa9.55□□□□□ -0.88
THUMPD3-207ENST00000461636 TSGA10IPQ3SY00 556 aa9.55□□□□□ -0.88
THUMPD3-207ENST00000461636 PPARGC1BQ86YN6 1023 aaKnown RBP9.55□□□□□ -0.88
THUMPD3-207ENST00000461636 BEND7Q8N7W2 519 aaPredicted RBP9.55□□□□□ -0.88
THUMPD3-207ENST00000461636 GPAT2Q6NUI2 795 aa9.54□□□□□ -0.88
THUMPD3-207ENST00000461636 OXCT2Q9BYC2 517 aaPredicted RBP9.54□□□□□ -0.88
THUMPD3-207ENST00000461636 RUBCNLQ9H714 662 aa9.54□□□□□ -0.88
THUMPD3-207ENST00000461636 OIP5O43482 229 aa9.53□□□□□ -0.88
THUMPD3-207ENST00000461636 THBS1P07996 1170 aa9.53□□□□□ -0.88
THUMPD3-207ENST00000461636 MSX1P28360 303 aa9.53□□□□□ -0.88
THUMPD3-207ENST00000461636 MCM6Q14566 821 aa9.53□□□□□ -0.88
THUMPD3-207ENST00000461636 TBC1D9Q6ZT07 1266 aa9.53□□□□□ -0.88
THUMPD3-207ENST00000461636 GDF10P55107 478 aa9.52□□□□□ -0.89
THUMPD3-207ENST00000461636 C14orf37Q86TY3 774 aa9.52□□□□□ -0.89
THUMPD3-207ENST00000461636 PLPP7Q8NBV4 271 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms