RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
CD40-203ENST00000461171 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
CD40-203ENST00000461171 UTRNP46939 3433 aa13.15□□□□□ -0.3
CD40-203ENST00000461171 ERVV-2B6SEH9 535 aa13.15□□□□□ -0.3
CD40-203ENST00000461171 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
CD40-203ENST00000461171 POLD1P28340 1107 aa13.15□□□□□ -0.3
CD40-203ENST00000461171 ITPK1Q13572 414 aa13.15□□□□□ -0.3
CD40-203ENST00000461171 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
CD40-203ENST00000461171 ZNF530Q6P9A1 599 aaPredicted RBP13.15□□□□□ -0.3
CD40-203ENST00000461171 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
CD40-203ENST00000461171 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
CD40-203ENST00000461171 MTHFSP49914 203 aa13.14□□□□□ -0.31
CD40-203ENST00000461171 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
CD40-203ENST00000461171 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
CD40-203ENST00000461171 COL5A3P25940 1745 aaPredicted RBP13.13□□□□□ -0.31
CD40-203ENST00000461171 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
CD40-203ENST00000461171 AK7Q96M32 723 aa13.13□□□□□ -0.31
CD40-203ENST00000461171 SLC4A9Q96Q91 983 aa13.13□□□□□ -0.31
CD40-203ENST00000461171 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
CD40-203ENST00000461171 MRC1P22897 1456 aa13.12□□□□□ -0.31
CD40-203ENST00000461171 YY1P25490 414 aa13.12□□□□□ -0.31
CD40-203ENST00000461171 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
CD40-203ENST00000461171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.11□□□□□ -0.31
CD40-203ENST00000461171 SSFA2P28290 1259 aa13.11□□□□□ -0.31
CD40-203ENST00000461171 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
CD40-203ENST00000461171 MSL1Q68DK7 614 aa13.11□□□□□ -0.31
CD40-203ENST00000461171 CABP4P57796 275 aa13.1□□□□□ -0.31
CD40-203ENST00000461171 C1orf141Q5JVX7 400 aa13.1□□□□□ -0.31
CD40-203ENST00000461171 SMIM5Q71RC9 77 aa13.1□□□□□ -0.31
CD40-203ENST00000461171 NLGN2Q8NFZ4 835 aa13.1□□□□□ -0.31
CD40-203ENST00000461171 GNPATO15228 680 aa13.09□□□□□ -0.31
CD40-203ENST00000461171 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
CD40-203ENST00000461171 TJP1Q07157 1748 aa13.09□□□□□ -0.31
CD40-203ENST00000461171 POTEHQ6S545 545 aa13.09□□□□□ -0.31
CD40-203ENST00000461171 CNTNAP4Q9C0A0 1308 aa13.09□□□□□ -0.31
CD40-203ENST00000461171 GOLGB1Q14789 3259 aaKnown RBP13.08□□□□□ -0.31
CD40-203ENST00000461171 CHD4Q14839 1912 aa13.08□□□□□ -0.32
CD40-203ENST00000461171 PHF14O94880 888 aa13.08□□□□□ -0.32
CD40-203ENST00000461171 HMOX1P09601 288 aa13.08□□□□□ -0.32
CD40-203ENST00000461171 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
CD40-203ENST00000461171 MYH14Q7Z406 1995 aaKnown RBP13.07□□□□□ -0.32
CD40-203ENST00000461171 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
CD40-203ENST00000461171 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
CD40-203ENST00000461171 C4AP0C0L4 1744 aa13.06□□□□□ -0.32
CD40-203ENST00000461171 RC3H1Q5TC82 1133 aaKnown RBP13.06□□□□□ -0.32
CD40-203ENST00000461171 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
CD40-203ENST00000461171 CD2APQ9Y5K6 639 aa13.06□□□□□ -0.32
CD40-203ENST00000461171 VIRMAQ69YN4 1812 aaKnown RBP13.06□□□□□ -0.32
CD40-203ENST00000461171 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
CD40-203ENST00000461171 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
CD40-203ENST00000461171 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
CD40-203ENST00000461171 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
CD40-203ENST00000461171 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
CD40-203ENST00000461171 RTCBQ9Y3I0 505 aaKnown RBP13.04□□□□□ -0.32
CD40-203ENST00000461171 UBR2Q8IWV8 1755 aa13.03□□□□□ -0.32
CD40-203ENST00000461171 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
CD40-203ENST00000461171 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
CD40-203ENST00000461171 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
CD40-203ENST00000461171 GPR162Q16538 588 aa13.03□□□□□ -0.32
CD40-203ENST00000461171 KIF13BQ9NQT8 1826 aa13.02□□□□□ -0.32
CD40-203ENST00000461171 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.33
CD40-203ENST00000461171 CNGB1Q14028 1251 aaPredicted RBP13.02□□□□□ -0.33
CD40-203ENST00000461171 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
CD40-203ENST00000461171 ZNF784Q8NCA9 323 aaPredicted RBP13.02□□□□□ -0.33
CD40-203ENST00000461171 KIAA1551Q9HCM1 1747 aa13.02□□□□□ -0.33
CD40-203ENST00000461171 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
CD40-203ENST00000461171 C10orf71Q711Q0 1435 aa13.01□□□□□ -0.33
CD40-203ENST00000461171 SIPA1L3O60292 1781 aaPredicted RBP13.01□□□□□ -0.33
CD40-203ENST00000461171 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
CD40-203ENST00000461171 MMP10P09238 476 aa13□□□□□ -0.33
CD40-203ENST00000461171 GYS1P13807 737 aa13□□□□□ -0.33
CD40-203ENST00000461171 PPP2R1AP30153 589 aa13□□□□□ -0.33
CD40-203ENST00000461171 PXDNLA1KZ92 1463 aa12.99□□□□□ -0.33
CD40-203ENST00000461171 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
CD40-203ENST00000461171 INTS5Q6P9B9 1019 aaKnown RBP12.99□□□□□ -0.33
CD40-203ENST00000461171 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
CD40-203ENST00000461171 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
CD40-203ENST00000461171 NLGN1Q8N2Q7 840 aa12.99□□□□□ -0.33
CD40-203ENST00000461171 CFAP53Q96M91 514 aa12.99□□□□□ -0.33
CD40-203ENST00000461171 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
CD40-203ENST00000461171 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
CD40-203ENST00000461171 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
CD40-203ENST00000461171 GRIN3BO60391 1043 aa12.98□□□□□ -0.33
CD40-203ENST00000461171 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
CD40-203ENST00000461171 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
CD40-203ENST00000461171 SOS1Q07889 1333 aaPredicted RBP12.97□□□□□ -0.33
CD40-203ENST00000461171 CYP19A1P11511 503 aaPredicted RBP12.97□□□□□ -0.33
CD40-203ENST00000461171 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
CD40-203ENST00000461171 RFC4P35249 363 aa12.97□□□□□ -0.33
CD40-203ENST00000461171 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
CD40-203ENST00000461171 PHACTR3Q96KR7 559 aa12.97□□□□□ -0.33
CD40-203ENST00000461171 CCDC87Q9NVE4 849 aa12.97□□□□□ -0.33
CD40-203ENST00000461171 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
CD40-203ENST00000461171 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
CD40-203ENST00000461171 ZBTB1Q9Y2K1 713 aa12.95□□□□□ -0.34
CD40-203ENST00000461171 ADCY9O60503 1353 aa12.94□□□□□ -0.34
CD40-203ENST00000461171 BRCA1P38398 1863 aaKnown RBP12.94□□□□□ -0.34
CD40-203ENST00000461171 DDR1Q08345 913 aa12.94□□□□□ -0.34
CD40-203ENST00000461171 FKBP8Q14318 412 aa12.94□□□□□ -0.34
CD40-203ENST00000461171 ZNF496Q96IT1 587 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms