RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 SPATA31A1Q5TZJ5 1347 aa10.05□□□□□ -0.8
ABCA4-202ENST00000460514 MAPK8IP3Q9UPT6 1336 aa10.05□□□□□ -0.8
ABCA4-202ENST00000460514 IL2RBP14784 551 aa10.04□□□□□ -0.8
ABCA4-202ENST00000460514 USHBP1Q8N6Y0 703 aa10.04□□□□□ -0.8
ABCA4-202ENST00000460514 QTRT2Q9H974 415 aaKnown RBP10.04□□□□□ -0.8
ABCA4-202ENST00000460514 USP35Q9P2H5 1018 aa10.04□□□□□ -0.8
ABCA4-202ENST00000460514 ATRNO75882 1429 aa10.04□□□□□ -0.8
ABCA4-202ENST00000460514 RGPD2P0DJD1 1756 aa10.03□□□□□ -0.8
ABCA4-202ENST00000460514 PRKAR2BP31323 418 aa10.03□□□□□ -0.8
ABCA4-202ENST00000460514 IRX5P78411 483 aaPredicted RBP10.03□□□□□ -0.8
ABCA4-202ENST00000460514 AMOTQ4VCS5 1084 aa10.03□□□□□ -0.8
ABCA4-202ENST00000460514 PLEKHO1Q53GL0 409 aaPredicted RBP10.03□□□□□ -0.8
ABCA4-202ENST00000460514 BARGINQ6ZT62 677 aa10.03□□□□□ -0.8
ABCA4-202ENST00000460514 PLCD3Q8N3E9 789 aa10.03□□□□□ -0.8
ABCA4-202ENST00000460514 RUNDC1Q96C34 613 aa10.03□□□□□ -0.8
ABCA4-202ENST00000460514 GJD4Q96KN9 370 aaPredicted RBP10.03□□□□□ -0.8
ABCA4-202ENST00000460514 RSPH6AQ9H0K4 717 aa10.03□□□□□ -0.8
ABCA4-202ENST00000460514 RBM6P78332 1123 aaKnown RBP10.02□□□□□ -0.81
ABCA4-202ENST00000460514 AEBP1Q8IUX7 1158 aa10.02□□□□□ -0.81
ABCA4-202ENST00000460514 GAS2L2Q8NHY3 880 aa10.02□□□□□ -0.81
ABCA4-202ENST00000460514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.02□□□□□ -0.81
ABCA4-202ENST00000460514 SPG7Q9UQ90 795 aa10.02□□□□□ -0.81
ABCA4-202ENST00000460514 PARP4Q9UKK3 1724 aaKnown RBP10.02□□□□□ -0.81
ABCA4-202ENST00000460514 NGEFQ8N5V2 710 aa10.01□□□□□ -0.81
ABCA4-202ENST00000460514 SGIP1Q9BQI5 828 aa10.01□□□□□ -0.81
ABCA4-202ENST00000460514 OVOS2A0A0G2JMS6 1433 aa10□□□□□ -0.81
ABCA4-202ENST00000460514 A0A0G2JS52 829 aa10□□□□□ -0.81
ABCA4-202ENST00000460514 EXOC5O00471 708 aa10□□□□□ -0.81
ABCA4-202ENST00000460514 MYT1Q01538 1121 aa10□□□□□ -0.81
ABCA4-202ENST00000460514 FAM98CQ17RN3 349 aaKnown RBP10□□□□□ -0.81
ABCA4-202ENST00000460514 C1orf141Q5JVX7 400 aa10□□□□□ -0.81
ABCA4-202ENST00000460514 ZCRB1Q8TBF4 217 aaKnown RBP10□□□□□ -0.81
ABCA4-202ENST00000460514 PLEKHF1Q96S99 279 aa10□□□□□ -0.81
ABCA4-202ENST00000460514 DISP2A7MBM2 1401 aa9.99□□□□□ -0.81
ABCA4-202ENST00000460514 MEGF6O75095 1541 aa9.99□□□□□ -0.81
ABCA4-202ENST00000460514 WNK3Q9BYP7 1800 aa9.99□□□□□ -0.81
ABCA4-202ENST00000460514 HSP90AB1P08238 724 aaKnown RBP9.99□□□□□ -0.81
ABCA4-202ENST00000460514 RXRBP28702 533 aa9.99□□□□□ -0.81
ABCA4-202ENST00000460514 LMOD3Q0VAK6 560 aa9.99□□□□□ -0.81
ABCA4-202ENST00000460514 DDB1Q16531 1140 aa9.99□□□□□ -0.81
ABCA4-202ENST00000460514 CCDC146Q8IYE0 955 aa9.99□□□□□ -0.81
ABCA4-202ENST00000460514 PCDH11XQ9BZA7 1347 aa9.99□□□□□ -0.81
ABCA4-202ENST00000460514 PCDH11YQ9BZA8 1340 aa9.99□□□□□ -0.81
ABCA4-202ENST00000460514 GLI3P10071 1580 aa9.98□□□□□ -0.81
ABCA4-202ENST00000460514 ONECUT3O60422 494 aaPredicted RBP9.98□□□□□ -0.81
ABCA4-202ENST00000460514 NFE2L2Q16236 605 aa9.98□□□□□ -0.81
ABCA4-202ENST00000460514 ZNF530Q6P9A1 599 aaPredicted RBP9.98□□□□□ -0.81
ABCA4-202ENST00000460514 PCDHB13Q9Y5F0 798 aa9.98□□□□□ -0.81
ABCA4-202ENST00000460514 TNS2Q63HR2 1409 aa9.98□□□□□ -0.81
ABCA4-202ENST00000460514 PKD1L3Q7Z443 1732 aa9.97□□□□□ -0.81
ABCA4-202ENST00000460514 APAF1O14727 1248 aa9.97□□□□□ -0.81
ABCA4-202ENST00000460514 HTATSF1O43719 755 aaKnown RBP9.97□□□□□ -0.81
ABCA4-202ENST00000460514 TMPOP42166 694 aaKnown RBP9.97□□□□□ -0.81
ABCA4-202ENST00000460514 PDE3BQ13370 1112 aa9.97□□□□□ -0.81
ABCA4-202ENST00000460514 AKAP4Q5JQC9 854 aa9.97□□□□□ -0.81
ABCA4-202ENST00000460514 IFNL2Q8IZJ0 200 aa9.97□□□□□ -0.81
ABCA4-202ENST00000460514 RTF1Q92541 710 aaKnown RBP9.97□□□□□ -0.81
ABCA4-202ENST00000460514 PHACTR3Q96KR7 559 aa9.97□□□□□ -0.81
ABCA4-202ENST00000460514 GNAT3A8MTJ3 354 aa9.96□□□□□ -0.82
ABCA4-202ENST00000460514 RIPK4P57078 832 aa9.96□□□□□ -0.82
ABCA4-202ENST00000460514 MTHFSDQ2M296 383 aaKnown RBP9.96□□□□□ -0.82
ABCA4-202ENST00000460514 SEPT12Q8IYM1 358 aa9.96□□□□□ -0.82
ABCA4-202ENST00000460514 TMEM106CQ9BVX2 250 aa9.96□□□□□ -0.82
ABCA4-202ENST00000460514 OCEL1Q9H607 264 aa9.96□□□□□ -0.82
ABCA4-202ENST00000460514 RGS17Q9UGC6 210 aaPredicted RBP9.96□□□□□ -0.82
ABCA4-202ENST00000460514 MAP3K5Q99683 1374 aa9.96□□□□□ -0.82
ABCA4-202ENST00000460514 THSD7AQ9UPZ6 1657 aa9.96□□□□□ -0.82
ABCA4-202ENST00000460514 HNRNPUQ00839 825 aaKnown RBP eCLIP9.95□□□□□ -0.82
ABCA4-202ENST00000460514 CALD1Q05682 793 aaKnown RBP9.95□□□□□ -0.82
ABCA4-202ENST00000460514 DDX54Q8TDD1 881 aaKnown RBP9.95□□□□□ -0.82
ABCA4-202ENST00000460514 ZBTB47Q9UFB7 747 aaPredicted RBP9.95□□□□□ -0.82
ABCA4-202ENST00000460514 LRRC37A3O60309 1634 aa9.95□□□□□ -0.82
ABCA4-202ENST00000460514 PHKG2P15735 406 aa9.94□□□□□ -0.82
ABCA4-202ENST00000460514 NEUROD2Q15784 382 aa9.94□□□□□ -0.82
ABCA4-202ENST00000460514 CCDC27Q2M243 656 aa9.94□□□□□ -0.82
ABCA4-202ENST00000460514 POTEAQ6S8J7 498 aa9.94□□□□□ -0.82
ABCA4-202ENST00000460514 DCAF5Q96JK2 942 aa9.94□□□□□ -0.82
ABCA4-202ENST00000460514 CYP27B1O15528 508 aa9.93□□□□□ -0.82
ABCA4-202ENST00000460514 RRP7AQ9Y3A4 280 aaKnown RBP9.93□□□□□ -0.82
ABCA4-202ENST00000460514 NKX1-1Q15270 411 aaPredicted RBP9.92□□□□□ -0.82
ABCA4-202ENST00000460514 KRT27Q7Z3Y8 459 aa9.92□□□□□ -0.82
ABCA4-202ENST00000460514 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
ABCA4-202ENST00000460514 DLG5Q8TDM6 1919 aa9.92□□□□□ -0.82
ABCA4-202ENST00000460514 SHANK3Q9BYB0 1731 aa9.91□□□□□ -0.82
ABCA4-202ENST00000460514 ERVV-2B6SEH9 535 aa9.91□□□□□ -0.82
ABCA4-202ENST00000460514 RNMTO43148 476 aaKnown RBP9.91□□□□□ -0.82
ABCA4-202ENST00000460514 TEFQ10587 303 aa9.91□□□□□ -0.82
ABCA4-202ENST00000460514 MPRIPQ6WCQ1 1025 aa9.91□□□□□ -0.82
ABCA4-202ENST00000460514 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
ABCA4-202ENST00000460514 RGS12O14924 1447 aa9.9□□□□□ -0.82
ABCA4-202ENST00000460514 ZBED9Q6R2W3 1325 aa9.9□□□□□ -0.82
ABCA4-202ENST00000460514 CABP4P57796 275 aa9.9□□□□□ -0.82
ABCA4-202ENST00000460514 FAM196AQ6ZSG2 479 aa9.9□□□□□ -0.82
ABCA4-202ENST00000460514 WDR63Q8IWG1 891 aa9.9□□□□□ -0.82
ABCA4-202ENST00000460514 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
ABCA4-202ENST00000460514 MARCH10Q8NA82 808 aaPredicted RBP9.9□□□□□ -0.82
ABCA4-202ENST00000460514 BCL9O00512 1426 aa9.9□□□□□ -0.83
ABCA4-202ENST00000460514 CEMIPQ8WUJ3 1361 aa9.89□□□□□ -0.83
ABCA4-202ENST00000460514 IL16Q14005 1332 aa9.89□□□□□ -0.83
ABCA4-202ENST00000460514 MCM10Q7L590 875 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 1128.1 ms