RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
MECP2-206ENST00000460227 DEFB132Q7Z7B7 95 aa16.92■□□□□ 0.3
MECP2-206ENST00000460227 PROM2Q8N271 834 aa16.92■□□□□ 0.3
MECP2-206ENST00000460227 TRIM35Q9UPQ4 493 aa16.92■□□□□ 0.3
MECP2-206ENST00000460227 BAG6P46379 1132 aa16.91■□□□□ 0.3
MECP2-206ENST00000460227 EN1Q05925 392 aaPredicted RBP16.91■□□□□ 0.3
MECP2-206ENST00000460227 ATG3Q9NT62 314 aa16.91■□□□□ 0.3
MECP2-206ENST00000460227 ASAP1Q9ULH1 1129 aa16.9■□□□□ 0.3
MECP2-206ENST00000460227 LMOD3Q0VAK6 560 aa16.89■□□□□ 0.29
MECP2-206ENST00000460227 TEFQ10587 303 aa16.89■□□□□ 0.29
MECP2-206ENST00000460227 SMARCC1Q92922 1105 aaPredicted RBP16.89■□□□□ 0.29
MECP2-206ENST00000460227 TAF7Q15545 349 aaPredicted RBP16.88■□□□□ 0.29
MECP2-206ENST00000460227 EZH2Q15910 746 aaKnown RBP16.88■□□□□ 0.29
MECP2-206ENST00000460227 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
MECP2-206ENST00000460227 CCDC27Q2M243 656 aa16.87■□□□□ 0.29
MECP2-206ENST00000460227 TXNRD1Q16881 649 aa16.86■□□□□ 0.29
MECP2-206ENST00000460227 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
MECP2-206ENST00000460227 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
MECP2-206ENST00000460227 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
MECP2-206ENST00000460227 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
MECP2-206ENST00000460227 LRRC4BQ9NT99 713 aa16.84■□□□□ 0.29
MECP2-206ENST00000460227 KCNQ3O43525 872 aa16.83■□□□□ 0.28
MECP2-206ENST00000460227 SLC27A3Q5K4L6 730 aa16.83■□□□□ 0.28
MECP2-206ENST00000460227 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
MECP2-206ENST00000460227 WWC1Q8IX03 1113 aa16.83■□□□□ 0.28
MECP2-206ENST00000460227 SLC4A9Q96Q91 983 aa16.83■□□□□ 0.28
MECP2-206ENST00000460227 BABAM1Q9NWV8 329 aa16.83■□□□□ 0.28
MECP2-206ENST00000460227 MIS18AQ9NYP9 233 aa16.83■□□□□ 0.28
MECP2-206ENST00000460227 NHSQ6T4R5 1651 aa16.82■□□□□ 0.28
MECP2-206ENST00000460227 ADAMTS7Q9UKP4 1686 aa16.82■□□□□ 0.28
MECP2-206ENST00000460227 PALLDQ8WX93 1383 aa16.82■□□□□ 0.28
MECP2-206ENST00000460227 LOC102724428A0A0B4J2F2 783 aa16.82■□□□□ 0.28
MECP2-206ENST00000460227 CHL1O00533 1208 aa16.82■□□□□ 0.28
MECP2-206ENST00000460227 SIK1P57059 783 aa16.82■□□□□ 0.28
MECP2-206ENST00000460227 SBF2Q86WG5 1849 aa16.82■□□□□ 0.28
MECP2-206ENST00000460227 MRC1P22897 1456 aa16.81■□□□□ 0.28
MECP2-206ENST00000460227 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
MECP2-206ENST00000460227 ZNF853P0CG23 659 aa16.81■□□□□ 0.28
MECP2-206ENST00000460227 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
MECP2-206ENST00000460227 TOGARAM1Q9Y4F4 1720 aa16.81■□□□□ 0.28
MECP2-206ENST00000460227 KCNQ4P56696 695 aa16.8■□□□□ 0.28
MECP2-206ENST00000460227 WDR63Q8IWG1 891 aa16.8■□□□□ 0.28
MECP2-206ENST00000460227 CFAP44Q96MT7 982 aa16.8■□□□□ 0.28
MECP2-206ENST00000460227 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
MECP2-206ENST00000460227 CCNL1Q9UK58 526 aaPredicted RBP16.8■□□□□ 0.28
MECP2-206ENST00000460227 HMGB2P26583 209 aaKnown RBP16.79■□□□□ 0.28
MECP2-206ENST00000460227 ATP6V1AP38606 617 aa16.79■□□□□ 0.28
MECP2-206ENST00000460227 CALD1Q05682 793 aaKnown RBP16.79■□□□□ 0.28
MECP2-206ENST00000460227 TTC5Q8N0Z6 440 aa16.79■□□□□ 0.28
MECP2-206ENST00000460227 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
MECP2-206ENST00000460227 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
MECP2-206ENST00000460227 DOT1LQ8TEK3 1739 aa16.79■□□□□ 0.28
MECP2-206ENST00000460227 ITPK1Q13572 414 aa16.78■□□□□ 0.28
MECP2-206ENST00000460227 ZNF521Q96K83 1311 aa16.77■□□□□ 0.28
MECP2-206ENST00000460227 TNS1Q9HBL0 1735 aaKnown RBP16.77■□□□□ 0.28
MECP2-206ENST00000460227 EIF4A1P60842 406 aaKnown RBP16.77■□□□□ 0.28
MECP2-206ENST00000460227 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.28
MECP2-206ENST00000460227 IFT57Q9NWB7 429 aa16.77■□□□□ 0.28
MECP2-206ENST00000460227 TSPYL4Q9UJ04 414 aa16.77■□□□□ 0.28
MECP2-206ENST00000460227 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.27
MECP2-206ENST00000460227 IL16Q14005 1332 aa16.76■□□□□ 0.27
MECP2-206ENST00000460227 GNAI1P63096 354 aa16.76■□□□□ 0.27
MECP2-206ENST00000460227 LAS1LQ9Y4W2 734 aaKnown RBP16.76■□□□□ 0.27
MECP2-206ENST00000460227 KAT6BQ8WYB5 2073 aa16.75■□□□□ 0.27
MECP2-206ENST00000460227 NBPF14Q5TI25 921 aa16.75■□□□□ 0.27
MECP2-206ENST00000460227 LINC00116Q8NCU8 138 aa16.75■□□□□ 0.27
MECP2-206ENST00000460227 BTAF1O14981 1849 aa16.75■□□□□ 0.27
MECP2-206ENST00000460227 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
MECP2-206ENST00000460227 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
MECP2-206ENST00000460227 DNAJC10Q8IXB1 793 aa16.74■□□□□ 0.27
MECP2-206ENST00000460227 AKT1S1Q96B36 256 aa16.74■□□□□ 0.27
MECP2-206ENST00000460227 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
MECP2-206ENST00000460227 MBIPQ9NS73 344 aa16.74■□□□□ 0.27
MECP2-206ENST00000460227 ITGB4P16144 1822 aa16.74■□□□□ 0.27
MECP2-206ENST00000460227 HEG1Q9ULI3 1381 aa16.74■□□□□ 0.27
MECP2-206ENST00000460227 GIGYF1O75420 1035 aaPredicted RBP16.73■□□□□ 0.27
MECP2-206ENST00000460227 SNRPA1P09661 255 aaKnown RBP16.73■□□□□ 0.27
MECP2-206ENST00000460227 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
MECP2-206ENST00000460227 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
MECP2-206ENST00000460227 SLC15A2Q16348 729 aa16.72■□□□□ 0.27
MECP2-206ENST00000460227 ANO8Q9HCE9 1232 aaPredicted RBP16.72■□□□□ 0.27
MECP2-206ENST00000460227 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
MECP2-206ENST00000460227 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.27
MECP2-206ENST00000460227 PRAMEF22A3QJZ6 481 aa16.71■□□□□ 0.27
MECP2-206ENST00000460227 ZNF827Q17R98 1081 aa16.71■□□□□ 0.27
MECP2-206ENST00000460227 STK32BQ9NY57 414 aa16.71■□□□□ 0.27
MECP2-206ENST00000460227 DLG5Q8TDM6 1919 aa16.7■□□□□ 0.26
MECP2-206ENST00000460227 STARD3NLO95772 234 aa16.7■□□□□ 0.26
MECP2-206ENST00000460227 INTS5Q6P9B9 1019 aaKnown RBP16.7■□□□□ 0.26
MECP2-206ENST00000460227 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
MECP2-206ENST00000460227 GOLGA2Q08379 1002 aa16.69■□□□□ 0.26
MECP2-206ENST00000460227 CNTNAP4Q9C0A0 1308 aa16.69■□□□□ 0.26
MECP2-206ENST00000460227 CRKLP46109 303 aaKnown RBP16.68■□□□□ 0.26
MECP2-206ENST00000460227 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
MECP2-206ENST00000460227 KRT24Q2M2I5 525 aa16.68■□□□□ 0.26
MECP2-206ENST00000460227 TSR2Q969E8 191 aaKnown RBP16.68■□□□□ 0.26
MECP2-206ENST00000460227 RGPD3A6NKT7 1758 aaPredicted RBP16.67■□□□□ 0.26
MECP2-206ENST00000460227 SIPA1L3O60292 1781 aaPredicted RBP16.67■□□□□ 0.26
MECP2-206ENST00000460227 RGPD4Q7Z3J3 1758 aa16.67■□□□□ 0.26
MECP2-206ENST00000460227 RPS6KA4O75676 772 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms