RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 ZNF831Q5JPB2 1677 aa23.54■■□□□ 1.36
SCARNA2-201ENST00000458748 U2SURPO15042 1029 aaKnown RBP23.53■■□□□ 1.36
SCARNA2-201ENST00000458748 HMOX1P09601 288 aa23.53■■□□□ 1.36
SCARNA2-201ENST00000458748 CABP4P57796 275 aa23.53■■□□□ 1.36
SCARNA2-201ENST00000458748 KLHL34Q8N239 644 aa23.53■■□□□ 1.36
SCARNA2-201ENST00000458748 SCN11AQ9UI33 1791 aa23.52■■□□□ 1.36
SCARNA2-201ENST00000458748 POLD1P28340 1107 aa23.52■■□□□ 1.36
SCARNA2-201ENST00000458748 AKAP4Q5JQC9 854 aa23.52■■□□□ 1.36
SCARNA2-201ENST00000458748 MAP3K5Q99683 1374 aa23.52■■□□□ 1.36
SCARNA2-201ENST00000458748 MSH5O43196 834 aa23.51■■□□□ 1.35
SCARNA2-201ENST00000458748 COL23A1Q86Y22 540 aaPredicted RBP23.51■■□□□ 1.35
SCARNA2-201ENST00000458748 AK7Q96M32 723 aa23.51■■□□□ 1.35
SCARNA2-201ENST00000458748 UBR3Q6ZT12 1888 aa23.5■■□□□ 1.35
SCARNA2-201ENST00000458748 PPP2R1AP30153 589 aa23.5■■□□□ 1.35
SCARNA2-201ENST00000458748 ATP6V1AP38606 617 aa23.49■■□□□ 1.35
SCARNA2-201ENST00000458748 LINC00116Q8NCU8 138 aa23.47■■□□□ 1.35
SCARNA2-201ENST00000458748 VIRMAQ69YN4 1812 aaKnown RBP23.47■■□□□ 1.35
SCARNA2-201ENST00000458748 ITPK1Q13572 414 aa23.46■■□□□ 1.35
SCARNA2-201ENST00000458748 NFATC2IPQ8NCF5 419 aa23.46■■□□□ 1.35
SCARNA2-201ENST00000458748 SSFA2P28290 1259 aa23.45■■□□□ 1.34
SCARNA2-201ENST00000458748 MSL1Q68DK7 614 aa23.45■■□□□ 1.34
SCARNA2-201ENST00000458748 MTHFSDQ2M296 383 aaKnown RBP23.44■■□□□ 1.34
SCARNA2-201ENST00000458748 GAS2L2Q8NHY3 880 aa23.44■■□□□ 1.34
SCARNA2-201ENST00000458748 RBM42Q9BTD8 480 aaKnown RBP23.44■■□□□ 1.34
SCARNA2-201ENST00000458748 ADAMTS7Q9UKP4 1686 aa23.43■■□□□ 1.34
SCARNA2-201ENST00000458748 COL5A3P25940 1745 aaPredicted RBP23.42■■□□□ 1.34
SCARNA2-201ENST00000458748 GPR162Q16538 588 aa23.42■■□□□ 1.34
SCARNA2-201ENST00000458748 NLGN2Q8NFZ4 835 aa23.42■■□□□ 1.34
SCARNA2-201ENST00000458748 SLC52A2Q9HAB3 445 aa23.42■■□□□ 1.34
SCARNA2-201ENST00000458748 MRC1P22897 1456 aa23.42■■□□□ 1.34
SCARNA2-201ENST00000458748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.41■■□□□ 1.34
SCARNA2-201ENST00000458748 RNMTO43148 476 aaKnown RBP23.41■■□□□ 1.34
SCARNA2-201ENST00000458748 U2AF1L5P0DN76 240 aaPredicted RBP23.41■■□□□ 1.34
SCARNA2-201ENST00000458748 U2AF1Q01081 240 aaKnown RBP eCLIP23.41■■□□□ 1.34
SCARNA2-201ENST00000458748 RC3H1Q5TC82 1133 aaKnown RBP23.41■■□□□ 1.34
SCARNA2-201ENST00000458748 SLC4A9Q96Q91 983 aa23.41■■□□□ 1.34
SCARNA2-201ENST00000458748 GNPATO15228 680 aa23.4■■□□□ 1.34
SCARNA2-201ENST00000458748 RALBP1Q15311 655 aa23.4■■□□□ 1.34
SCARNA2-201ENST00000458748 AMIGO3Q86WK7 504 aa23.4■■□□□ 1.34
SCARNA2-201ENST00000458748 PELP1Q8IZL8 1130 aaKnown RBP23.4■■□□□ 1.34
SCARNA2-201ENST00000458748 LGR6Q9HBX8 967 aa23.4■■□□□ 1.34
SCARNA2-201ENST00000458748 CICQ96RK0 1608 aaPredicted RBP23.4■■□□□ 1.34
SCARNA2-201ENST00000458748 PHF14O94880 888 aa23.39■■□□□ 1.33
SCARNA2-201ENST00000458748 DDX10Q13206 875 aaKnown RBP23.39■■□□□ 1.33
SCARNA2-201ENST00000458748 SMIM5Q71RC9 77 aa23.39■■□□□ 1.33
SCARNA2-201ENST00000458748 CNTNAP4Q9C0A0 1308 aa23.38■■□□□ 1.33
SCARNA2-201ENST00000458748 FCHSD2O94868 740 aa23.38■■□□□ 1.33
SCARNA2-201ENST00000458748 NEFMP07197 916 aa23.38■■□□□ 1.33
SCARNA2-201ENST00000458748 GNAT3A8MTJ3 354 aa23.37■■□□□ 1.33
SCARNA2-201ENST00000458748 PTCD1O75127 700 aaKnown RBP23.37■■□□□ 1.33
SCARNA2-201ENST00000458748 PRKAR2BP31323 418 aa23.37■■□□□ 1.33
SCARNA2-201ENST00000458748 ZNF784Q8NCA9 323 aaPredicted RBP23.37■■□□□ 1.33
SCARNA2-201ENST00000458748 RTCBQ9Y3I0 505 aaKnown RBP23.37■■□□□ 1.33
SCARNA2-201ENST00000458748 ADRA2BP18089 450 aa23.36■■□□□ 1.33
SCARNA2-201ENST00000458748 RSPH6AQ9H0K4 717 aa23.36■■□□□ 1.33
SCARNA2-201ENST00000458748 CHD4Q14839 1912 aa23.35■■□□□ 1.33
SCARNA2-201ENST00000458748 TRAPPC3LQ5T215 181 aa23.35■■□□□ 1.33
SCARNA2-201ENST00000458748 RPS6KA4O75676 772 aa23.34■■□□□ 1.33
SCARNA2-201ENST00000458748 MYH14Q7Z406 1995 aaKnown RBP23.34■■□□□ 1.33
SCARNA2-201ENST00000458748 TJP1Q07157 1748 aa23.33■■□□□ 1.33
SCARNA2-201ENST00000458748 TEFQ10587 303 aa23.33■■□□□ 1.33
SCARNA2-201ENST00000458748 PNNQ9H307 717 aaKnown RBP23.33■■□□□ 1.33
SCARNA2-201ENST00000458748 CD2APQ9Y5K6 639 aa23.31■■□□□ 1.32
SCARNA2-201ENST00000458748 UTRNP46939 3433 aa23.3■■□□□ 1.32
SCARNA2-201ENST00000458748 CRKLP46109 303 aaKnown RBP23.3■■□□□ 1.32
SCARNA2-201ENST00000458748 TTC5Q8N0Z6 440 aa23.3■■□□□ 1.32
SCARNA2-201ENST00000458748 RTF1Q92541 710 aaKnown RBP23.3■■□□□ 1.32
SCARNA2-201ENST00000458748 PHACTR3Q96KR7 559 aa23.3■■□□□ 1.32
SCARNA2-201ENST00000458748 SIPA1L3O60292 1781 aaPredicted RBP23.29■■□□□ 1.32
SCARNA2-201ENST00000458748 UBR2Q8IWV8 1755 aa23.29■■□□□ 1.32
SCARNA2-201ENST00000458748 YBX3P16989 372 aaKnown RBP eCLIP23.29■■□□□ 1.32
SCARNA2-201ENST00000458748 VSIG10Q8N0Z9 540 aa23.29■■□□□ 1.32
SCARNA2-201ENST00000458748 IL17REQ8NFR9 667 aa23.29■■□□□ 1.32
SCARNA2-201ENST00000458748 ARHGEF1Q92888 912 aaKnown RBP23.29■■□□□ 1.32
SCARNA2-201ENST00000458748 KCPQ6ZWJ8 1503 aa23.28■■□□□ 1.32
SCARNA2-201ENST00000458748 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
SCARNA2-201ENST00000458748 NLGN1Q8N2Q7 840 aa23.28■■□□□ 1.32
SCARNA2-201ENST00000458748 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.32
SCARNA2-201ENST00000458748 RFC4P35249 363 aa23.27■■□□□ 1.32
SCARNA2-201ENST00000458748 C4AP0C0L4 1744 aa23.27■■□□□ 1.32
SCARNA2-201ENST00000458748 MYBBP1AQ9BQG0 1328 aaKnown RBP23.26■■□□□ 1.31
SCARNA2-201ENST00000458748 HTATSF1O43719 755 aaKnown RBP23.25■■□□□ 1.31
SCARNA2-201ENST00000458748 DNAJC10Q8IXB1 793 aa23.25■■□□□ 1.31
SCARNA2-201ENST00000458748 INTS5Q6P9B9 1019 aaKnown RBP23.24■■□□□ 1.31
SCARNA2-201ENST00000458748 CCDC87Q9NVE4 849 aa23.24■■□□□ 1.31
SCARNA2-201ENST00000458748 GRIN3BO60391 1043 aa23.23■■□□□ 1.31
SCARNA2-201ENST00000458748 CYP19A1P11511 503 aaPredicted RBP23.23■■□□□ 1.31
SCARNA2-201ENST00000458748 ZNF790Q6PG37 636 aa23.23■■□□□ 1.31
SCARNA2-201ENST00000458748 MAPK8IP3Q9UPT6 1336 aa23.23■■□□□ 1.31
SCARNA2-201ENST00000458748 MMP10P09238 476 aa23.22■■□□□ 1.31
SCARNA2-201ENST00000458748 GYS1P13807 737 aa23.22■■□□□ 1.31
SCARNA2-201ENST00000458748 TEX13AQ9BXU3 409 aaPredicted RBP23.21■■□□□ 1.31
SCARNA2-201ENST00000458748 STARD3NLO95772 234 aa23.2■■□□□ 1.3
SCARNA2-201ENST00000458748 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
SCARNA2-201ENST00000458748 USP42Q9H9J4 1324 aaKnown RBP23.19■■□□□ 1.3
SCARNA2-201ENST00000458748 BTBD11A6QL63 1104 aa23.19■■□□□ 1.3
SCARNA2-201ENST00000458748 WWC3Q9ULE0 1092 aa23.19■■□□□ 1.3
SCARNA2-201ENST00000458748 KIF13BQ9NQT8 1826 aa23.19■■□□□ 1.3
SCARNA2-201ENST00000458748 HEG1Q9ULI3 1381 aa23.18■■□□□ 1.3
SCARNA2-201ENST00000458748 ZNF496Q96IT1 587 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms